Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4WFS
DownloadVisualize
BU of 4wfs by Molmil
Crystal Structure of tRNA-dihydrouridine(20) synthase catalytic domain
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, SULFATE ION, ...
Authors:Bou-Nader, C, Pecqueur, L, Kamah, A, Bregeon, D, Golinelli-Pimpaneau, B, Guimaraes, B.G, Fontecave, M, Hamdane, D.
Deposit date:2014-09-17
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:An extended dsRBD is required for post-transcriptional modification in human tRNAs.
Nucleic Acids Res., 43, 2015
4WFT
DownloadVisualize
BU of 4wft by Molmil
Crystal structure of tRNA-dihydrouridine(20) synthase dsRBD domain
Descriptor: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Authors:Bou-Nader, C, Pecqueur, L, Kamah, A, Bregeon, D, Golinelli-Pimpaneau, B, Guimaraes, B.G, Fontecave, M, Hamdane, D.
Deposit date:2014-09-17
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An extended dsRBD is required for post-transcriptional modification in human tRNAs.
Nucleic Acids Res., 43, 2015
4K22
DownloadVisualize
BU of 4k22 by Molmil
Structure of the C-terminal truncated form of E.Coli C5-hydroxylase UBII involved in ubiquinone (Q8) biosynthesis
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Pecqueur, L, Lombard, M, Golinelli-pimpaneau, B, Fontecave, M.
Deposit date:2013-04-07
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:ubiI, a New Gene in Escherichia coli Coenzyme Q Biosynthesis, Is Involved in Aerobic C5-hydroxylation.
J.Biol.Chem., 288, 2013
1DDI
DownloadVisualize
BU of 1ddi by Molmil
CRYSTAL STRUCTURE OF SIR-FP60
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFITE REDUCTASE [NADPH] FLAVOPROTEIN ALPHA-COMPONENT
Authors:Gruez, A, Pignol, D, Zeghouf, M, Coves, J, Fontecave, M, Ferrer, J.L, Fontecilla-Camps, J.C.
Deposit date:1999-11-10
Release date:2000-11-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Four crystal structures of the 60 kDa flavoprotein monomer of the sulfite reductase indicate a disordered flavodoxin-like module.
J.Mol.Biol., 299, 2000
1DDG
DownloadVisualize
BU of 1ddg by Molmil
CRYSTAL STRUCTURE OF SIR-FP60
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, SULFITE REDUCTASE (NADPH) FLAVOPROTEIN ALPHA-COMPONENT
Authors:Gruez, A, Pignol, D, Zeghouf, M, Coves, J, Fontecave, M, Ferrer, J.L, Fontecilla-Camps, J.C.
Deposit date:1999-11-10
Release date:2000-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Four crystal structures of the 60 kDa flavoprotein monomer of the sulfite reductase indicate a disordered flavodoxin-like module.
J.Mol.Biol., 299, 2000
1QFJ
DownloadVisualize
BU of 1qfj by Molmil
CRYSTAL STRUCTURE OF NAD(P)H:FLAVIN OXIDOREDUCTASE FROM ESCHERICHIA COLI
Descriptor: GLYCEROL, PROTEIN (FLAVIN REDUCTASE)
Authors:Ingelman, M, Ramaswamy, S, Niviere, V, Fontecave, M, Eklund, H.
Deposit date:1999-04-12
Release date:1999-06-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of NAD(P)H:flavin oxidoreductase from Escherichia coli.
Biochemistry, 38, 1999
3CIW
DownloadVisualize
BU of 3ciw by Molmil
X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, FeFe-Hydrogenase maturase, ...
Authors:Nicolet, Y, Ruback, J.K, Posewitz, M.C, Amara, P, Mathevon, C, Atta, M, Fontecave, M, Fontecilla-Camps, J.C.
Deposit date:2008-03-12
Release date:2008-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima
J.Biol.Chem., 283, 2008
3CIX
DownloadVisualize
BU of 3cix by Molmil
X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima in complex with thiocyanate
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Nicolet, Y, Ruback, J.K, Posewitz, M.C, Amara, P, Mathevon, C, Atta, M, Fontecave, M, Fontecilla-Camps, J.C.
Deposit date:2008-03-12
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima
J.Biol.Chem., 283, 2008
2Q0M
DownloadVisualize
BU of 2q0m by Molmil
Tricarbonylmanganese(I)-lysozyme complex : a structurally characterized organometallic protein
Descriptor: CARBON MONOXIDE, CHLORIDE ION, Lysozyme C, ...
Authors:Razavet, M, Artero, V, Cavazza, C, Oudart, Y, Fontecilla-Camps, J.C, Fontecave, M.
Deposit date:2007-05-22
Release date:2007-12-11
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tricarbonylmanganese(I)-lysozyme complex: a structurally characterized organometallic protein.
Chem.Commun.(Camb.), 2007
6QYH
DownloadVisualize
BU of 6qyh by Molmil
Structure of Apo HPAB from E.coli
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxyphenylacetate 3-monooxygenase oxygenase component, CALCIUM ION, ...
Authors:Pecqueur, L, Lombard, M, Deng, Y, Fontecave, M.
Deposit date:2019-03-09
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and Functional Characterization of 4-Hydroxyphenylacetate 3-Hydroxylase from Escherichia coli.
Chembiochem, 21, 2020
6QYI
DownloadVisualize
BU of 6qyi by Molmil
Structure of HPAB from E.coli in complex with FAD
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxyphenylacetate 3-monooxygenase oxygenase component, DI(HYDROXYETHYL)ETHER, ...
Authors:Pecqueur, L, Lombard, M, Deng, Y, Fontecave, M.
Deposit date:2019-03-09
Release date:2019-06-12
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Characterization of 4-Hydroxyphenylacetate 3-Hydroxylase from Escherichia coli.
Chembiochem, 21, 2020
5KH0
DownloadVisualize
BU of 5kh0 by Molmil
Crystal Structure of HydF from thermosipho melanesiensis in complex with a [4Fe-4S] cluster
Descriptor: IRON/SULFUR CLUSTER, Small GTP-binding protein
Authors:Caserta, G, Pecqueur, L, Fontecave, M.
Deposit date:2016-06-14
Release date:2017-05-03
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional characterization of the hydrogenase-maturation HydF protein.
Nat. Chem. Biol., 13, 2017
5LAD
DownloadVisualize
BU of 5lad by Molmil
Crystal Structure of apo HydF from thermotoga maritima
Descriptor: Putative GTP-binding protein
Authors:Caserta, G, Pecqueur, L, Fontecave, M.
Deposit date:2016-06-14
Release date:2017-05-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of the hydrogenase-maturation HydF protein.
Nat. Chem. Biol., 13, 2017
6H6O
DownloadVisualize
BU of 6h6o by Molmil
UbiJ-SCP2 Ubiquinone synthesis protein
Descriptor: (2S)-2-hydroxybutanedioic acid, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Fyfe, C.D, Legrand, P, Pecqueur, L, Ciccone, L, Lombard, M, Fontecave, M.
Deposit date:2018-07-28
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone.
Cell Chem Biol, 26, 2019
6H6N
DownloadVisualize
BU of 6h6n by Molmil
UbiJ-SCP2 Ubiquinone synthesis protein
Descriptor: CALCIUM ION, TERBIUM(III) ION, Ubiquinone biosynthesis protein UbiJ
Authors:Fyfe, C.D, Legrand, P, Pecqueur, L, Ciccone, L, Lombard, M, Fontecave, M.
Deposit date:2018-07-28
Release date:2019-02-13
Last modified:2019-05-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone.
Cell Chem Biol, 26, 2019
6H6P
DownloadVisualize
BU of 6h6p by Molmil
UbiJ-SCP2 Ubiquinone synthesis protein
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL, Ubiquinone biosynthesis protein UbiJ
Authors:Fyfe, C.D, Legrand, P, Pecqueur, L, Ciccone, L, Lombard, M, Fontecave, M.
Deposit date:2018-07-28
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone.
Cell Chem Biol, 26, 2019
6Z96
DownloadVisualize
BU of 6z96 by Molmil
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz) soaked with 4-thiouracil (12.65 keV, 7.125 keV (Fe-SAD) and 6.5 keV (S-SAD) data)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, HYDROSULFURIC ACID, ...
Authors:Pecqueur, L, Zhou, J, Fontecave, M, Golinelli-Pimpaneau, B.
Deposit date:2020-06-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.327 Å)
Cite:Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.
Angew.Chem.Int.Ed.Engl., 60, 2021
6Z92
DownloadVisualize
BU of 6z92 by Molmil
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz) solved by Fe-SAD phasing
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DUF523 domain-containing protein, ...
Authors:Pecqueur, L, Zhou, J, Fontecave, M, Golinelli-Pimpaneau, B.
Deposit date:2020-06-03
Release date:2020-09-30
Last modified:2020-12-30
Method:X-RAY DIFFRACTION (2.067 Å)
Cite:Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.
Angew.Chem.Int.Ed.Engl., 60, 2021
6Z93
DownloadVisualize
BU of 6z93 by Molmil
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Pecqueur, L, Zhou, J, Fontecave, M, Golinelli-Pimpaneau, B.
Deposit date:2020-06-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.505 Å)
Cite:Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.
Angew.Chem.Int.Ed.Engl., 60, 2021
6Z94
DownloadVisualize
BU of 6z94 by Molmil
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz)(S-SAD data)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DUF523 domain-containing protein, ...
Authors:Pecqueur, L, Zhou, J, Fontecave, M, Golinelli-Pimpaneau, B.
Deposit date:2020-06-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.
Angew.Chem.Int.Ed.Engl., 60, 2021
6ZW9
DownloadVisualize
BU of 6zw9 by Molmil
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz) soaked with 4-thiouracil (S-SAD data)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DUF523 domain-containing protein, ...
Authors:Pecqueur, L, Zhou, J, Fontecave, M, Golinelli-Pimpaneau, B.
Deposit date:2020-07-28
Release date:2020-09-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.
Angew.Chem.Int.Ed.Engl., 60, 2021
5NL1
DownloadVisualize
BU of 5nl1 by Molmil
Shigella IpaA-VBS3/TBS in complex with the Talin VBS1 domain 488-512
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Invasin IpaA, ...
Authors:Bou-Nader, C, Pecqueur, L, Valencia-Gallardo, C, Fontecave, M, Tran Van Nhieu, G.
Deposit date:2017-04-03
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Shigella IpaA Binding to Talin Stimulates Filopodial Capture and Cell Adhesion.
Cell Rep, 26, 2019
6EZA
DownloadVisualize
BU of 6eza by Molmil
Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain E294K mutant
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Bou-Nader, C, Bregeon, D, Pecqueur, L, Vincent, G, Fontecave, M, Hamdane, D.
Deposit date:2017-11-14
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases.
Biochemistry, 57, 2018
6EZB
DownloadVisualize
BU of 6ezb by Molmil
Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain Q305K mutant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Bou-Nader, C, Bregeon, D, Pecqueur, L, Fontecave, M, Hamdane, D.
Deposit date:2017-11-14
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases.
Biochemistry, 57, 2018
6EZC
DownloadVisualize
BU of 6ezc by Molmil
Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain E294K Q305K double mutant
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Bou-Nader, C, Bregeon, D, Vincent, G, Fontecave, M, Hamdane, D.
Deposit date:2017-11-14
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases.
Biochemistry, 57, 2018

 

12>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon