Author results

1AH2
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SERINE PROTEASE PB92 FROM BACILLUS ALCALOPHILUS, NMR, 18 STRUCTURES
Descriptor:SERINE PROTEASE PB92
Authors:Boelens, R., Schipper, D., Martin, J.R., Karimi-Nejad, Y., Mulder, F., Zwan, J.V.D., Mariani, M.
Deposit date:1997-04-11
Release date:1998-04-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of serine protease PB92 from Bacillus alcalophilus presents a rigid fold with a flexible substrate-binding site.
Structure, 5, 1997
1LCC
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor:DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
Authors:Chuprina, V.P., Rullmann, J.A.C., Lamerichs, R.M.J.N., Van Boom, J.H., Boelens, R., Kaptein, R.
Deposit date:1993-03-25
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
1LCD
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STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor:DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), Lac Repressor, ...
Authors:Chuprina, V.P., Rullmann, J.A.C., Lamerichs, R.M.J.N., Van Boom, J.H., Boelens, R., Kaptein, R.
Deposit date:1993-03-25
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 234, 1993
1CCM
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DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL
Descriptor:CRAMBIN
Authors:Bonvin, A.M.J.J., Rullmann, J.A.C., Lamerichs, R.M.J.N., Boelens, R., Kaptein, R.
Deposit date:1993-04-14
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:"Ensemble" iterative relaxation matrix approach: a new NMR refinement protocol applied to the solution structure of crambin.
Proteins, 15, 1993
1CCN
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DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL
Descriptor:CRAMBIN
Authors:Bonvin, A.M.J.J., Rullmann, J.A.C., Lamerichs, R.M.J.N., Boelens, R., Kaptein, R.
Deposit date:1993-04-14
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Direct NOE refinement of biomolecular structures using 2D NMR data
J.Biomol.NMR, 1, 1991
1CJG
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NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
Descriptor:DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'), PROTEIN (LAC REPRESSOR)
Authors:Spronk, C.A.E.M., Bonvin, A.M.J.J., Radha, P.K., Melacini, G., Boelens, R., Kaptein, R.
Deposit date:1999-04-14
Release date:2000-01-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator.
Structure Fold.Des., 7, 1999
1LQC
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LAC REPRESSOR HEADPIECE (RESIDUES 1-56), NMR, 32 STRUCTURES
Descriptor:LAC REPRESSOR
Authors:Slijper, M., Bonvin, A.M.J.J., Boelens, R., Kaptein, R.
Deposit date:1996-08-13
Release date:1997-02-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data: change of tertiary structure upon binding to the lac operator.
J.Mol.Biol., 259, 1996
1ARQ
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RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF THE ARC REPRESSOR
Descriptor:ARC REPRESSOR
Authors:Bonvin, A.M.J.J., Vis, H., Burgering, M.J.M., Breg, J.N., Boelens, R., Kaptein, R.
Deposit date:1993-08-24
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations.
J.Mol.Biol., 236, 1994
1ARR
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RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF THE ARC REPRESSOR
Descriptor:ARC REPRESSOR
Authors:Bonvin, A.M.J.J., Vis, H., Burgering, M.J.M., Breg, J.N., Boelens, R., Kaptein, R.
Deposit date:1993-08-24
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations.
J.Mol.Biol., 236, 1994
1HRA
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THE SOLUTION STRUCTURE OF THE HUMAN RETINOIC ACID RECEPTOR-BETA DNA-BINDING DOMAIN
Descriptor:RETINOIC ACID RECEPTOR, ZINC ION
Authors:Knegtel, R.M.A., Katahira, M., Schilthuis, J.G., Bonvin, A.M.J.J., Boelens, R., Eib, D., Van Der Saag, P.T., Kaptein, R.
Deposit date:1993-07-25
Release date:1994-01-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of the human retinoic acid receptor-beta DNA-binding domain.
J.Biomol.NMR, 3, 1993
1MNT
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SOLUTION STRUCTURE OF DIMERIC MNT REPRESSOR (1-76)
Descriptor:MNT REPRESSOR
Authors:Burgering, M.J.M., Boelens, R., Gilbert, D.E., Breg, J.N., Knight, K.L., Sauer, R.T., Kaptein, R.
Deposit date:1994-06-28
Release date:1994-09-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of dimeric Mnt repressor (1-76).
Biochemistry, 33, 1994
1QEY
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NMR STRUCTURE DETERMINATION OF THE TETRAMERIZATION DOMAIN OF THE MNT REPRESSOR: AN ASYMMETRIC A-HELICAL ASSEMBLY IN SLOW EXCHANGE
Descriptor:PROTEIN (REGULATORY PROTEIN MNT)
Authors:Nooren, I.M.A., George, A.V.E., Kaptein, R., Sauer, R.T., Boelens, R.
Deposit date:1999-04-03
Release date:1999-08-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The tetramerization domain of the Mnt repressor consists of two right-handed coiled coils.
Nat.Struct.Biol., 6, 1999
1RGD
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STRUCTURE REFINEMENT OF THE GLUCOCORTICOID RECEPTOR-DNA BINDING DOMAIN FROM NMR DATA BY RELAXATION MATRIX CALCULATIONS
Descriptor:GLUCOCORTICOID RECEPTOR, ZINC ION
Authors:Van Tilborg, M.A.A., Bonvin, A.M.J.J., Hard, K., Davis, A., Maler, B., Boelens, R., Yamamoto, K.R., Kaptein, R.
Deposit date:1995-01-06
Release date:1995-02-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure refinement of the glucocorticoid receptor-DNA binding domain from NMR data by relaxation matrix calculations.
J.Mol.Biol., 247, 1995
1SFV
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PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:PHOSPHOLIPASE A2, CALCIUM ION
Authors:Van Den Berg, B., Tessari, M., Boelens, R., Dijkman, R., Kaptein, R., De Haas, G.H., Verheij, H.M.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
1SFW
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PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, 18 STRUCTURES
Descriptor:PHOSPHOLIPASE A2, CALCIUM ION
Authors:Van Den Berg, B., Tessari, M., Boelens, R., Dijkman, R., Kaptein, R., De Haas, G.H., Verheij, H.M.
Deposit date:1996-02-23
Release date:1996-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
1E0E
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N-TERMINAL ZINC-BINDING HHCC DOMAIN OF HIV-2 INTEGRASE
Descriptor:HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 INTEGRASE, ZINC ION
Authors:Eijkelenboom, A.P.A.M., Van Den ent, F.M.I., Plasterk, R.H.A., Kaptein, R., Boelens, R.
Deposit date:2000-03-25
Release date:2001-03-19
Last modified:2017-06-14
Method:SOLUTION NMR
Cite:Refined Solution Structure of the Dimeric N-Terminal Hhcc Domain of HIV-2 Integrase
J.Biomol.NMR, 18, 2000
1L1M
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SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
Descriptor:5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3', 5'-D(*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3', Lactose operon repressor
Authors:Kalodimos, C.G., Bonvin, A.M.J.J., Salinas, R.K., Wechselberger, R., Boelens, R., Kaptein, R.
Deposit date:2002-02-19
Release date:2002-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain.
EMBO J., 21, 2002
1QMC
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C-TERMINAL DNA-BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, 42 STRUCTURES
Descriptor:HIV-1 INTEGRASE
Authors:Eijkelenboom, A.P.A.M., Sprangers, R., Hard, K., Puras Lutzke, R.A., Plasterk, R.H.A., Boelens, R., Kaptein, R.
Deposit date:1999-09-27
Release date:1999-12-14
Last modified:2015-10-14
Method:SOLUTION NMR
Cite:Refined Solution Structure of the C-Terminal DNA-Binding Domain of Human Immunovirus-1 Integrase.
Proteins: Struct.,Funct., Genet., 36, 1999
1HUE
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HISTONE-LIKE PROTEIN
Descriptor:HU PROTEIN
Authors:Vis, H., Mariani, M., Vorgias, C.E., Wilson, K.S., Kaptein, R., Boelens, R.
Deposit date:1995-05-26
Release date:1995-10-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the HU protein from Bacillus stearothermophilus.
J.Mol.Biol., 254, 1995
2BJC
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NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR
Descriptor:LACTOSE OPERON REPRESSOR, 5'-D(*GP*AP*AP*TP*TP*GP*TP*AP*AP*GP *CP*GP*CP*TP*TP*AP*CP*AP*AP*TP*TP*C)-3'
Authors:Salinas, R.K., Folkers, G.E., Bonvin, A.M.J.J., Das, D., Boelens, R., Kaptein, R.
Deposit date:2005-02-01
Release date:2005-10-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Altered Specificity in DNA Binding by the Lac Repressor: A Mutant Lac Headpiece that Mimics the Gal Repressor
Chembiochem, 6, 2005
3PHY
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PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES
Descriptor:PHOTOACTIVE YELLOW PROTEIN, 4'-HYDROXYCINNAMIC ACID
Authors:Dux, P., Rubinstenn, G., Vuister, G.W., Boelens, R., Mulder, F.A.A., Hard, K., Hoff, W.D., Kroon, A., Crielaard, W., Hellingwerf, K.J., Kaptein, R.
Deposit date:1998-02-06
Release date:1998-05-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the photoactive yellow protein.
Biochemistry, 37, 1998
1AH9
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THE STRUCTURE OF THE TRANSLATIONAL INITIATION FACTOR IF1 FROM ESCHERICHIA COLI, NMR, 19 STRUCTURES
Descriptor:INITIATION FACTOR 1
Authors:Sette, M., Van Tilborg, P., Spurio, R., Kaptein, R., Paci, M., Gualerzi, C.O., Boelens, R.
Deposit date:1997-04-16
Release date:1997-07-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif.
EMBO J., 16, 1997
1KFT
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SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF UVRC FROM E-COLI
Descriptor:Excinuclease ABC subunit C
Authors:Singh, S., Folkers, G.E., Bonvin, A.M.J.J., Boelens, R., Wechselberger, R., Niztayev, A., Kaptein, R.
Deposit date:2001-11-23
Release date:2002-11-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and DNA-binding properties of the C-terminal domain of UvrC from E.coli
EMBO J., 21, 2002
1M1F
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KID TOXIN PROTEIN FROM E.COLI PLASMID R1
Descriptor:Kid toxin protein, PHOSPHATE ION
Authors:Hargreaves, D., Santos-Sierra, S., Giraldo, R., Sabariegos-Jareno, R., de la Cueva-Mendez, G., Boelens, R., Diaz-Orejas, R., Rafferty, J.B.
Deposit date:2002-06-19
Release date:2002-11-20
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Functional Analysis of the Kid toxin protein from E.coli plasmid R1
Structure, 10, 2002
1T3O
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SOLUTION STRUCTURE OF CSRA, A BACTERIAL CARBON STORAGE REGULATORY PROTEIN
Descriptor:Carbon storage regulator
Authors:Koharudin, L.M.I., Georgiou, T., Kleanthous, C., Geoffrey, R., Kaptein, R., Boelens, R.
Deposit date:2004-04-27
Release date:2005-10-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A model for RNA binding by the bacterial carbon storage regulatory protein, CsrA
To be Published
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