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5TRU
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BU of 5tru by Molmil
Structure of the first-in-class checkpoint inhibitor Ipilimumab bound to human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, Ipilimumab Fab heavy chain, Ipilimumab Fab light chain
Authors:Ramagopal, U.A, Liu, W, Garrett-Thomson, S.C, Yan, Q, Srinivasan, M, Wong, S.C, Bell, A, Mankikar, S, Rangan, V.S, Deshpande, S, Bonanno, J.B, Korman, A.J, Almo, S.C.
Deposit date:2016-10-27
Release date:2017-05-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3KFW
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BU of 3kfw by Molmil
Uncharacterized protein Rv0674 from Mycobacterium tuberculosis
Descriptor: Uncharacterized protein
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-28
Release date:2009-12-01
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Uncharacterized protein Rv0674 from Mycobacterium tuberculosis
To be Published
3KHN
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BU of 3khn by Molmil
Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris.
Descriptor: MotB protein, putative
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-30
Release date:2009-12-01
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris
To be Published
3S5S
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BU of 3s5s by Molmil
Crystal structure of putative mandelate racemase/muconate lactonizing enzyme (PSI/COM target 200551) from Sorangium cellulosum
Descriptor: Mandelate racemase/muconate lactonizing enzyme family protein, SULFATE ION
Authors:Ramagopal, U.A, Toro, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-05-23
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of putative mandelate racemase/muconate lactonizing enzyme (PSI/COM target 200551) from Sorangium cellulosum
To be published
3S4T
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BU of 3s4t by Molmil
Crystal structure of putative amidohydrolase-2 (EFI-target 500288)from Polaromonas sp. JS666
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Amidohydrolase 2, ...
Authors:Ramagopal, U.A, Toro, R, Girlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-05-20
Release date:2011-08-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of putative amidohydrolase-2 (EFI-target 500288)from Polaromonas sp. JS666
To be published
1OAD
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BU of 1oad by Molmil
Glucose isomerase from Streptomyces rubiginosus in P21212 crystal form
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Ramagopal, U.A, Dauter, M, Dauter, Z.
Deposit date:2003-01-08
Release date:2003-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Sad Manganese in Two Crystal Forms of Glucose Isomerase
Acta Crystallogr.,Sect.D, 59, 2003
2A1V
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BU of 2a1v by Molmil
Crystal structure of Deinococcus radiodurans protein DR2400, Pfam domain DUF419
Descriptor: conserved hypothetical protein
Authors:Ramagopal, U.A, Patskovsky, Y.V, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-21
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Hypothetical protein from Deinococcus radiodurans
To be Published
4ETO
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BU of 4eto by Molmil
Structure of S100A4 in complex with non-muscle myosin-IIA peptide
Descriptor: CALCIUM ION, Myosin-9, Protein S100-A4
Authors:Ramagopal, U.A, Dulyaninova, N.G, Kumar, P.R, Almo, S.C, Bresnick, A.R, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-04-24
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of S100A4 with bound peptide P
To be Published
1RZN
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BU of 1rzn by Molmil
Crystal Structure of Penicillin-binding protein-related factor A from Bacillus Subtilis.
Descriptor: Recombination protein U
Authors:Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-12-24
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal Structure of Penicillin-binding protein-related factor A from Bacillus Subtilis.
To be Published
1TWY
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BU of 1twy by Molmil
Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae
Descriptor: ABC transporter, periplasmic substrate-binding protein, MAGNESIUM ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-07-01
Release date:2004-12-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of hypothetical ABC-type phosphate transporter
To be Published
1RKQ
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BU of 1rkq by Molmil
Crystal structure of HAD-like phosphatase yidA from E. coli
Descriptor: CHLORIDE ION, Hypothetical protein yidA, MAGNESIUM ION
Authors:Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-11-23
Release date:2004-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of NYSGRC target T1436: A Hypothetical protein yidA.
To be Published
4HZA
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BU of 4hza by Molmil
Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
Descriptor: Poliovirus receptor-related protein 2
Authors:Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-11-14
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
To be published
4HSZ
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BU of 4hsz by Molmil
Structure of truncated (delta8C) S100A4
Descriptor: CALCIUM ION, Protein S100-A4
Authors:Ramagopal, U.A, Dulyaninova, N.G, Kumar, P.R, Almo, S.C, Bresnick, A.R, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-10-31
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of truncated (delta8C) S100A4
To be Published
3BGE
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BU of 3bge by Molmil
Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae
Descriptor: Predicted ATPase, SULFATE ION
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Meyer, A.J, Toro, R, Freeman, J, Adams, J, Koss, J, Maletic, M, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-26
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae.
To be Published
2QF9
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BU of 2qf9 by Molmil
Crystal structure of putative secreted protein DUF305 from Streptomyces coelicolor
Descriptor: 1,2-ETHANEDIOL, Putative secreted protein
Authors:Ramagopal, U.A, Rutter, M, Adams, J, Toro, R, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-06-27
Release date:2007-07-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of putative secreted protein DUF305 from Streptomyces coelicolor.
To be Published
2QKP
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BU of 2qkp by Molmil
Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Uncharacterized protein
Authors:Ramagopal, U.A, Toro, R, Gilmore, M, Wu, B, Bain, K, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-11
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of C-terminal domain of SMU_1151c from Streptococcus mutans.
To be Published
2R5X
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BU of 2r5x by Molmil
Crystal structure of uncharacterized conserved protein YugN from Geobacillus kaustophilus HTA426
Descriptor: Uncharacterized conserved protein
Authors:Ramagopal, U.A, Patskovsky, Y, Shi, W, Toro, R, Meyer, A.J, Freeman, J, Wu, B, Koss, J, Groshong, C, Rodgers, L, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-09-04
Release date:2007-09-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of uncharacterized protein YugN from Geobacillus kaustophilus HTA426.
To be Published
2QR4
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BU of 2qr4 by Molmil
Crystal structure of oligoendopeptidase-F from Enterococcus faecium
Descriptor: Peptidase M3B, oligoendopeptidase F
Authors:Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Bain, K, Rodgers, L, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-27
Release date:2007-08-14
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of oligoendopeptidase-F from Enterococcus faecium.
To be Published
2QSR
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BU of 2qsr by Molmil
Crystal structure of C-terminal domain of transcription-repair coupling factor
Descriptor: Transcription-repair coupling factor
Authors:Ramagopal, U.A, Toro, R, Gilmore, M, Bain, K, Iizuka, M, Wasserman, S, Rodgers, L, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-31
Release date:2007-09-11
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of C-terminal domain of transcription-repair coupling factor.
To be Published
2R9G
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BU of 2r9g by Molmil
Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium
Descriptor: AAA ATPase, central region, ACETATE ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Shi, W, Toro, R, Meyer, A.J, Rutter, M, Wu, B, Groshong, C, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-09-12
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of the C-Terminal Domain of AAA ATPase from Enterococcus faecium.
To be Published
3KHK
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BU of 3khk by Molmil
Crystal structure of type-I restriction-modification system methylation subunit (MM_0429) from Methanosarchina mazei.
Descriptor: SULFATE ION, Type I restriction-modification system methylation subunit
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-30
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of type-I restriction-modification system methylation subunit (MM_0429) from Methanosarchina mazei.
To be Published
3KW2
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BU of 3kw2 by Molmil
Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis
Descriptor: ADENOSINE, Probable r-RNA methyltransferase
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-11-30
Release date:2010-01-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis
To be Published
3L8C
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BU of 3l8c by Molmil
Structure of probable D-alanine--poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes
Descriptor: D-alanine--poly(phosphoribitol) ligase subunit 1
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-30
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure of probable D-alanine--poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes
To be Published
3LGX
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BU of 3lgx by Molmil
Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--poly(phosphoribitol) ligase subunit 1
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-21
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP
To be published
3LHX
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BU of 3lhx by Molmil
Crystal structure of a Ketodeoxygluconokinase (kdgk) from Shigella flexneri
Descriptor: Ketodeoxygluconokinase
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-23
Release date:2010-03-02
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of a Ketodeoxygluconokinase (kdgk) from Shigella flexneri
To be Published

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