Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7SJY
DownloadVisualize
BU of 7sjy by Molmil
Crystal structure of Clostridium thermocellum RsgI9 S1C-NTF2 bi-domain
Descriptor: Anti-sigma-I factor RsgI9, GLYCEROL
Authors:Mahoney, B.J, Cascio, D, Clubb, R.T.
Deposit date:2021-10-19
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the Clostridium thermocellum RsgI9 ectodomain provides insight into the mechanism of biomass sensing.
Proteins, 90, 2022
4LVW
DownloadVisualize
BU of 4lvw by Molmil
Structure of the THF riboswitch bound to 7-deazaguanine
Descriptor: 7-DEAZAGUANINE, THF riboswitch
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2013-07-26
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.768 Å)
Cite:A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch.
Chem.Biol., 21, 2014
2XEU
DownloadVisualize
BU of 2xeu by Molmil
Ring domain
Descriptor: RING FINGER PROTEIN 4, SULFATE ION, ZINC ION, ...
Authors:Plechanovova, A, McMahon, S.A, Johnson, K.A, Navratilova, I, Naismith, J.H, Hay, R.T.
Deposit date:2010-05-18
Release date:2010-07-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism of Ubiquitylation by Dimeric Ring Ligase Rnf4
Nat.Struct.Mol.Biol., 18, 2011
2XO0
DownloadVisualize
BU of 2xo0 by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screening
Descriptor: 1,3,5-TRIAZINE-2,4-DIAMINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
Deposit date:2010-08-09
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
3K0X
DownloadVisualize
BU of 3k0x by Molmil
Crystal structure of telomere capping protein Ten1 from Saccharomyces pombe
Descriptor: IODIDE ION, Protein Ten1
Authors:Gelinas, A.D, Reyes, F.E, Batey, R.T, Wuttke, D.S.
Deposit date:2009-09-25
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Telomere capping proteins are structurally related to RPA with an additional telomere-specific domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
4LE4
DownloadVisualize
BU of 4le4 by Molmil
Crystal structure of PaGluc131A with cellotriose
Descriptor: Beta-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Jiang, T, Chan, H.C, Huang, C.H, Ko, T.P, Huang, T.Y, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of a GH131 beta-Glucanase Catalytic Domain from Podospora anserina in Complex with Cellotriose
To be Published
4LE3
DownloadVisualize
BU of 4le3 by Molmil
Crystal structure of a GH131 beta-glucanase catalytic domain from Podospora anserina
Descriptor: Beta-glucanase
Authors:Jiang, T, Chan, H.C, Huang, C.H, Ko, T.P, Huang, T.Y, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2013-09-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of a GH131 beta-Glucanase Catalytic Domain from Podospora anserina in Complex with Cellotriose
To be Published
3KB7
DownloadVisualize
BU of 3kb7 by Molmil
Crystal structure of Polo-like kinase 1 in complex with a pyrazoloquinazoline inhibitor
Descriptor: 8-{[2-methoxy-5-(4-methylpiperazin-1-yl)phenyl]amino}-1-methyl-4,5-dihydro-1H-pyrazolo[4,3-h]quinazoline-3-carboxamide, L(+)-TARTARIC ACID, Serine/threonine-protein kinase PLK1, ...
Authors:Bossi, R.T, Bertrand, J.A.
Deposit date:2009-10-20
Release date:2010-05-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of 4,5-dihydro-1H-pyrazolo[4,3-h]quinazoline derivatives as a new class of orally and selective Polo-like kinase 1 inhibitors
J.Med.Chem., 53, 2010
3RSP
DownloadVisualize
BU of 3rsp by Molmil
STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A
Descriptor: CHLORIDE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Hargraves, S.R, Klink, T.A, Raines, R.T.
Deposit date:1997-10-20
Release date:1998-04-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and stability of the P93G variant of ribonuclease A.
Protein Sci., 7, 1998
2KW8
DownloadVisualize
BU of 2kw8 by Molmil
Solution Structure of Bacillus anthracis Sortase A (SrtA) Transpeptidase
Descriptor: LPXTG-site transpeptidase family protein
Authors:Weiner, E.M, Robson, S.A, Marohn, M, Clubb, R.T.
Deposit date:2010-03-31
Release date:2010-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Sortase A enzyme that attaches proteins to the cell wall of Bacillus anthracis contains an unusual active site architecture.
J.Biol.Chem., 285, 2010
2LBZ
DownloadVisualize
BU of 2lbz by Molmil
Thurincin H
Descriptor: Thuricin17
Authors:Sit, C.S, van Belkum, M.J, Mckay, R.T, Worobo, R.W, Vederas, J.C.
Deposit date:2011-04-10
Release date:2012-01-18
Last modified:2018-08-22
Method:SOLUTION NMR
Cite:The 3D solution structure of thurincin H, a bacteriocin with four sulfur to alpha-carbon crosslinks.
Angew.Chem.Int.Ed.Engl., 50, 2011
2LN7
DownloadVisualize
BU of 2ln7 by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for the catalytic domain of B. anthracis SrtD
Descriptor: LPXTG-site transpeptidase family protein
Authors:Robson, S.A, Weiner, E.M, Clubb, R.T.
Deposit date:2011-12-19
Release date:2012-11-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Sortase Required for Efficient Production of Infectious Bacillus anthracis Spores.
Biochemistry, 51, 2012
2LA0
DownloadVisualize
BU of 2la0 by Molmil
Trn- peptide of the two-component bacteriocin Thuricin CD
Descriptor: Uncharacterized protein
Authors:Sit, C.S, Mckay, R.T, Hill, C, Ross, R.P, Vederas, J.C.
Deposit date:2011-02-27
Release date:2012-01-11
Last modified:2018-08-22
Method:SOLUTION NMR
Cite:The 3D structure of thuricin CD, a two-component bacteriocin with cysteine sulfur to alpha-carbon cross-links.
J.Am.Chem.Soc., 133, 2011
7JR6
DownloadVisualize
BU of 7jr6 by Molmil
H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors
Descriptor: 1-(3-fluorophenyl)-N-[trans-4-(2-hydroxypropan-2-yl)cyclohexyl]-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carboxamide, GLUTATHIONE, Hematopoietic prostaglandin D synthase, ...
Authors:Nolte, R.T, Somers, D.O, Gampe, R.T.
Deposit date:2020-08-11
Release date:2021-05-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A knowledge-based, structural-aided discovery of a novel class of 2-phenylimidazo[1,2-a]pyridine-6-carboxamide H-PGDS inhibitors.
Bioorg.Med.Chem.Lett., 47, 2021
7JR8
DownloadVisualize
BU of 7jr8 by Molmil
H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLUTATHIONE, ...
Authors:Nolte, R.T, Somers, D.O, Gampe, R.T.
Deposit date:2020-08-11
Release date:2021-05-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:A knowledge-based, structural-aided discovery of a novel class of 2-phenylimidazo[1,2-a]pyridine-6-carboxamide H-PGDS inhibitors.
Bioorg.Med.Chem.Lett., 47, 2021
830C
DownloadVisualize
BU of 830c by Molmil
COLLAGENASE-3 (MMP-13) COMPLEXED TO A SULPHONE-BASED HYDROXAMIC ACID
Descriptor: 4-[4-(4-CHLORO-PHENOXY)-BENZENESULFONYLMETHYL]-TETRAHYDRO-PYRAN-4-CARBOXYLIC ACID HYDROXYAMIDE, CALCIUM ION, MMP-13, ...
Authors:Lovejoy, B, Welch, A, Carr, S, Luong, C, Broka, C, Hendricks, R.T, Campbell, J, Walker, K, Martin, R, Van Wart, H, Browner, M.F.
Deposit date:1998-08-06
Release date:1999-08-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of MMP-1 and -13 reveal the structural basis for selectivity of collagenase inhibitors.
Nat.Struct.Biol., 6, 1999
6P2H
DownloadVisualize
BU of 6p2h by Molmil
Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches
Descriptor: 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), MAGNESIUM ION, ...
Authors:Matyjasik, M.M, Batey, R.T.
Deposit date:2019-05-21
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches.
Nucleic Acids Res., 47, 2019
6IJ1
DownloadVisualize
BU of 6ij1 by Molmil
Crystal structure of a protein from Actinoplanes
Descriptor: ACETATE ION, IMIDAZOLE, Prenylcyclase
Authors:Yang, Z.Z, Zhang, L.L, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-10-08
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:Crystal structure of TchmY from Actinoplanes teichomyceticus.
Acta Crystallogr.,Sect.F, 75, 2019
6PP7
DownloadVisualize
BU of 6pp7 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6ITA
DownloadVisualize
BU of 6ita by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 mutant
Descriptor: Butyrophilin subfamily 3 member A1
Authors:Yang, Y.Y, Liu, W.D, Cai, N.N, Chen, C.C, Guo, R.T, Zhang, Y.H.
Deposit date:2018-11-20
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated V gamma 9V delta 2 T Cell Activation.
Immunity, 50, 2019
7QPB
DownloadVisualize
BU of 7qpb by Molmil
Catalytic C-lobe of the HECT-type ubiquitin ligase E6AP in complex with a hybrid foldamer-peptide macrocycle
Descriptor: Isoform I of Ubiquitin-protein ligase E3A, hybrid foldamer-peptide macrocycle
Authors:Dengler, S, Howard, R.T, Morozov, V, Tsiamantas, C, Douat, C, Suga, H, Huc, I.
Deposit date:2022-01-03
Release date:2023-09-27
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:Display Selection of a Hybrid Foldamer-Peptide Macrocycle.
Angew.Chem.Int.Ed.Engl., 62, 2023
5XFY
DownloadVisualize
BU of 5xfy by Molmil
Crystal structure of a novel PET hydrolase S131A mutant from Ideonella sakaiensis 201-F6
Descriptor: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2017-04-11
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insight into catalytic mechanism of PET hydrolase
Nat Commun, 8, 2017
5XG0
DownloadVisualize
BU of 5xg0 by Molmil
Crystal structure of a novel PET hydrolase from Ideonella sakaiensis 201-F6
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2017-04-11
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural insight into catalytic mechanism of PET hydrolase
Nat Commun, 8, 2017
5XK6
DownloadVisualize
BU of 5xk6 by Molmil
Structure of a prenyltransferase soaked with IPP
Descriptor: MAGNESIUM ION, PYROPHOSPHATE 2-, SULFATE ION, ...
Authors:Ko, T.P, Guo, R.T, Liu, W, Chen, C.C, Gao, J.
Deposit date:2017-05-05
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:"Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
Angew. Chem. Int. Ed. Engl., 57, 2018
5XFZ
DownloadVisualize
BU of 5xfz by Molmil
Crystal structure of a novel PET hydrolase R103G/S131A mutant from Ideonella sakaiensis 201-F6
Descriptor: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2017-04-11
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insight into catalytic mechanism of PET hydrolase
Nat Commun, 8, 2017

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon