3DE8
| Crystal Structure of a Dimeric Cytochrome cb562 Assembly Induced by Copper Coordination | Descriptor: | CALCIUM ION, COPPER (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Salgado, E.N, Lewis, R.A, Rheingold, A.L, Tezcan, F.A. | Deposit date: | 2008-06-08 | Release date: | 2009-04-21 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.72 Å) | Cite: | Control of protein oligomerization symmetry by metal coordination: C2 and C3 symmetrical assemblies through Cu(II) and Ni(II) coordination. Inorg.Chem., 48, 2009
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3DE9
| Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination | Descriptor: | NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562 | Authors: | Salgado, E.N, Lewis, R.A, Rheingold, A.L, Tezcan, F.A. | Deposit date: | 2008-06-08 | Release date: | 2009-04-21 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.04 Å) | Cite: | Control of protein oligomerization symmetry by metal coordination: C2 and C3 symmetrical assemblies through Cu(II) and Ni(II) coordination. Inorg.Chem., 48, 2009
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3QW1
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3QVZ
| Crystal structure of the Zn-RIDC1 complex stabilized by BMOE crosslinks cocrystallized in the presence of Cu(II) | Descriptor: | 1,1'-ethane-1,2-diylbis(1H-pyrrole-2,5-dione), COPPER (II) ION, Cytochrome cb562, ... | Authors: | Salgado, E.N, Tezcan, F.A. | Deposit date: | 2011-02-26 | Release date: | 2011-06-22 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.64 Å) | Cite: | Templated construction of a zn-selective protein dimerization motif. Inorg.Chem., 50, 2011
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3QW0
| Crystal structure of the Zn-RIDC1 complex stabilized by BMB crosslinks | Descriptor: | 1,1'-butane-1,4-diylbis(1H-pyrrole-2,5-dione), 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome cb562, ... | Authors: | Salgado, E.N, Tezcan, F.A. | Deposit date: | 2011-02-26 | Release date: | 2011-06-22 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Templated construction of a zn-selective protein dimerization motif. Inorg.Chem., 50, 2011
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3QVY
| Crystal structure of the Zn-RIDC1 complex stabilized by BMOE crosslinks | Descriptor: | 1,1'-ethane-1,2-diylbis(1H-pyrrole-2,5-dione), Cytochrome cb562, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Salgado, E.N, Tezcan, F.A. | Deposit date: | 2011-02-26 | Release date: | 2011-06-22 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Templated construction of a zn-selective protein dimerization motif. Inorg.Chem., 50, 2011
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3HNJ
| Crystal structure of the Zn-induced tetramer of the engineered cyt cb562 variant RIDC-2 | Descriptor: | PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ZINC ION | Authors: | Salgado, E.N, Lewis, R.A, Brodin, J, Tezcan, F.A. | Deposit date: | 2009-05-31 | Release date: | 2010-02-09 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA, 107, 2010
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3HNK
| Crystal structure of the dimeric assembly of the cyt cb562 variant RIDC-1 | Descriptor: | PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562 | Authors: | Salgado, E.N, Lewis, R.A, Brodin, J, Tezcan, F.A. | Deposit date: | 2009-05-31 | Release date: | 2010-02-09 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA, 107, 2010
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3HNI
| Crystal structure of the Zn-induced tetramer of the engineered cyt cb562 variant RIDC-1 | Descriptor: | PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ZINC ION | Authors: | Salgado, E.N, Lewis, R.A, Brodin, J, Tezcan, F.A. | Deposit date: | 2009-05-31 | Release date: | 2010-02-09 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA, 107, 2010
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3HNL
| Crystal structure of the Cu-induced dimer of the engineered cyt cb562 variant RIDC-1 | Descriptor: | CHLORIDE ION, COPPER (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Salgado, E.N, Lewis, R.A, Brodin, J, Tezcan, F.A. | Deposit date: | 2009-05-31 | Release date: | 2010-02-09 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA, 107, 2010
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2QLA
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3C62
| Tetrameric Cytochrome cb562 (H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination | Descriptor: | CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ... | Authors: | Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J. | Deposit date: | 2008-02-02 | Release date: | 2008-05-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation. J.Am.Chem.Soc., 130, 2008
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3C63
| Tetrameric Cytochrome cb562 (K34/H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination | Descriptor: | CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ... | Authors: | Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J. | Deposit date: | 2008-02-02 | Release date: | 2008-05-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation. J.Am.Chem.Soc., 130, 2008
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7UMS
| Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 in complex with antibody 41 - Upright conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fab 41 heavy chain, ... | Authors: | Jenni, S, Zongli, L, Wang, Y, Bessey, T, Salgado, E.N, Schmidt, A.G, Greenberg, H.B, Jiang, B, Harrison, S.C. | Deposit date: | 2022-04-07 | Release date: | 2022-07-27 | Last modified: | 2022-08-31 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion. J.Virol., 96, 2022
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7UMT
| Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 - Reversed conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ... | Authors: | Jenni, S, Zongli, L, Wang, Y, Bessey, T, Salgado, E.N, Schmidt, A.G, Greenberg, H.B, Jiang, B, Harrison, S.C. | Deposit date: | 2022-04-07 | Release date: | 2022-07-27 | Last modified: | 2022-08-31 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion. J.Virol., 96, 2022
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6OJ3
| In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP) | Descriptor: | Inner capsid protein VP2, RNA-directed RNA polymerase | Authors: | Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C. | Deposit date: | 2019-04-10 | Release date: | 2019-04-24 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (4.5 Å) | Cite: | In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase. J.Mol.Biol., 431, 2019
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6OJ4
| In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP) | Descriptor: | Inner capsid protein VP2, RNA-directed RNA polymerase | Authors: | Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C. | Deposit date: | 2019-04-10 | Release date: | 2019-04-24 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase. J.Mol.Biol., 431, 2019
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6OJ5
| In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP_RNA) | Descriptor: | Inner capsid protein VP2, RNA-directed RNA polymerase | Authors: | Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C. | Deposit date: | 2019-04-10 | Release date: | 2019-04-24 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (5.2 Å) | Cite: | In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase. J.Mol.Biol., 431, 2019
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6OJ6
| In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA) | Descriptor: | Inner capsid protein VP2, RNA-directed RNA polymerase, Template, ... | Authors: | Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C. | Deposit date: | 2019-04-10 | Release date: | 2019-04-24 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase. J.Mol.Biol., 431, 2019
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3M79
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6WXF
| Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Intermediate conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ... | Authors: | Herrmann, T, Harrison, S.C, Jenni, S. | Deposit date: | 2020-05-10 | Release date: | 2021-01-20 | Last modified: | 2021-03-10 | Method: | ELECTRON MICROSCOPY (4.3 Å) | Cite: | Functional refolding of the penetration protein on a non-enveloped virus. Nature, 590, 2021
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6WXE
| Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ... | Authors: | Herrmann, T, Harrison, S.C, Jenni, S. | Deposit date: | 2020-05-10 | Release date: | 2021-01-20 | Last modified: | 2021-03-10 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Functional refolding of the penetration protein on a non-enveloped virus. Nature, 590, 2021
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6WXG
| Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Reversed conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ... | Authors: | Herrmann, T, Harrison, S.C, Jenni, S. | Deposit date: | 2020-05-10 | Release date: | 2021-01-20 | Last modified: | 2021-03-10 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Functional refolding of the penetration protein on a non-enveloped virus. Nature, 590, 2021
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3HG4
| Human alpha-galactosidase catalytic mechanism 3. Covalent intermediate | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Guce, A.I, Clark, N.E, Garman, S.C. | Deposit date: | 2009-05-13 | Release date: | 2009-11-24 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Catalytic mechanism of human alpha-galactosidase. J.Biol.Chem., 285, 2010
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3HG5
| Human alpha-galactosidase catalytic mechanism 4. Product bound | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, Alpha-galactosidase A, ... | Authors: | Guce, A.I, Clark, N.E, Garman, S.C. | Deposit date: | 2009-05-13 | Release date: | 2009-11-24 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Catalytic mechanism of human alpha-galactosidase. J.Biol.Chem., 285, 2010
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