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3RYL
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BU of 3ryl by Molmil
Dimerization domain of Vibrio parahemolyticus VopL
Descriptor: protein VPA1370
Authors:Namgoong, S, Dominguez, R.
Deposit date:2011-05-11
Release date:2011-08-31
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of actin filament nucleation by Vibrio VopL and implications for tandem W domain nucleation.
Nat.Struct.Mol.Biol., 18, 2011
6KT1
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BU of 6kt1 by Molmil
Crystal structure of an OspA mutant
Descriptor: Outer surface protein A
Authors:Namioka, S, makabe, K.
Deposit date:2019-08-26
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of an OspA mutant
To Be Published
7CN7
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BU of 7cn7 by Molmil
T4 phage spackle protein gp61.3 complex with lysozyme domain of gp5 tail lysozyme
Descriptor: 1,2-ETHANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Baseplate central spike complex protein gp5, ...
Authors:Kanamaru, S, Leiman, P.G.
Deposit date:2020-07-30
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure and Function of the T4 Spackle Protein Gp61.3.
Viruses, 12, 2020
7CN6
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BU of 7cn6 by Molmil
T4 phage spackle protein gp61.3
Descriptor: CALCIUM ION, Protein spackle
Authors:Kanamaru, S, Leiman, P.G.
Deposit date:2020-07-30
Release date:2020-10-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Function of the T4 Spackle Protein Gp61.3.
Viruses, 12, 2020
5T3M
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BU of 5t3m by Molmil
Solution structure of a triple mutant of HwTx-IV - a potent blocker of Nav1.7
Descriptor: Mu-theraphotoxin-Hs2a
Authors:Rahnama, S, Sharma, G, Mobli, M.
Deposit date:2016-08-25
Release date:2017-09-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The structure, dynamics and selectivity profile of a NaV1.7 potency-optimised huwentoxin-IV variant.
PLoS ONE, 12, 2017
1WTH
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BU of 1wth by Molmil
Crystal structure of gp5-S351L mutant and gp27 complex
Descriptor: Baseplate structural protein Gp27, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kanamaru, S, Ishiwata, Y, Suzuki, T, Rossmann, M.G, Arisaka, F.
Deposit date:2004-11-23
Release date:2005-03-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Control of bacteriophage t4 tail lysozyme activity during the infection process
J.Mol.Biol., 346, 2005
1YOB
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BU of 1yob by Molmil
C69A Flavodoxin II from Azotobacter vinelandii
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin 2, SULFATE ION
Authors:Alagaratnam, S, van Pouderoyen, G, Pijning, T, Dijkstra, B.W, Cavazzini, D, Rossi, G.L, Canters, G.W.
Deposit date:2005-01-27
Release date:2005-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A crystallographic study of Cys69Ala flavodoxin II from Azotobacter vinelandii: structural determinants of redox potential
Protein Sci., 14, 2005
3NCV
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BU of 3ncv by Molmil
NgoL
Descriptor: DNA mismatch repair protein mutL
Authors:Namadurai, S, Jain, D, Nair, D.T.
Deposit date:2010-06-05
Release date:2010-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The C-terminal domain of the MutL homolog from Neisseria gonorrhoeae forms an inverted homodimer
Plos One, 5, 2010
4L1D
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BU of 4l1d by Molmil
Voltage-gated sodium channel beta3 subunit Ig domain
Descriptor: Sodium channel subunit beta-3
Authors:Namadurai, S, Weimhofer, M, Rajappa, R, Stott, K, Klingauf, J, Chirgadze, D.Y, Jackson, A.P.
Deposit date:2013-06-03
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Molecular Imaging of the Nav Channel beta 3 Subunit Indicates a Trimeric Assembly.
J.Biol.Chem., 289, 2014
1K28
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BU of 1k28 by Molmil
The Structure of the Bacteriophage T4 Cell-Puncturing Device
Descriptor: BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G.
Deposit date:2001-09-26
Release date:2002-02-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the cell-puncturing device of bacteriophage T4.
Nature, 415, 2002
3M1F
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BU of 3m1f by Molmil
Crosslinked complex of actin with first W domain of Vibrio parahaemolyticus VopL
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Namgoong, S, Dominguez, R.
Deposit date:2010-03-04
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of a longitudinal actin dimer assembled by tandem w domains: implications for actin filament nucleation.
J.Mol.Biol., 403, 2010
7OYV
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BU of 7oyv by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88A S247D in complex with spermidine
Descriptor: (2R)-1-methoxypropan-2-amine, (2~{R})-1-[(2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-yl]oxypropan-2-amine, (2~{S})-1-methoxypropan-2-amine, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYZ
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BU of 7oyz by Molmil
E.coli's putrescine receptor variant PotF/D in complex with spermidine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Putrescine-binding periplasmic protein PotF, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYS
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BU of 7oys by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D Y87S in complex with spermidine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYW
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BU of 7oyw by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88L S247D in complex with spermidine
Descriptor: (2R)-1-methoxypropan-2-amine, (2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-amine, (2~{S})-1-(2-methoxyethoxy)propan-2-amine, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYT
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BU of 7oyt by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88L in complex with spermidine
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYU
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BU of 7oyu by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D Y87S F88Y in complex with spermidine
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Putrescine-binding periplasmic protein PotF, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
7OYX
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BU of 7oyx by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D Y87S F88Y S247D in complex with spermidine
Descriptor: (2~{R})-1-(2-methoxyethoxy)propan-2-amine, (2~{R})-1-[(2~{R})-1-[(2~{S})-1-[(2~{S})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-yl]oxypropan-2-yl]oxypropan-2-amine, (2~{S})-1-(2-methoxyethoxy)propan-2-amine, ...
Authors:Shanmugaratnam, S, Kroeger, P, Hocker, B.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
3IP7
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BU of 3ip7 by Molmil
Structure of Atu2422-GABA receptor in complex with valine
Descriptor: ABC transporter, substrate binding protein (Amino acid), CALCIUM ION, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
3IP5
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BU of 3ip5 by Molmil
Structure of Atu2422-GABA receptor in complex with alanine
Descriptor: ABC transporter, substrate binding protein (Amino acid), ALANINE, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
3IP6
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BU of 3ip6 by Molmil
Structure of Atu2422-GABA receptor in complex with proline
Descriptor: ABC transporter, substrate binding protein (Amino acid), PROLINE, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
3IPC
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BU of 3ipc by Molmil
Structure of ATU2422-GABA F77A mutant receptor in complex with leucine
Descriptor: ABC transporter, substrate binding protein (Amino acid), LEUCINE, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
3IPA
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BU of 3ipa by Molmil
Structure of ATU2422-GABA receptor in complex with alanine
Descriptor: ABC transporter, substrate binding protein (Amino acid), ALANINE, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
3IP9
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BU of 3ip9 by Molmil
Structure of Atu2422-GABA receptor in complex with GABA
Descriptor: ABC transporter, substrate binding protein (Amino acid), GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Morera, S, Planamente, S, Vigouroux, A.
Deposit date:2009-08-17
Release date:2010-07-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens.
J.Biol.Chem., 285, 2010
5OWF
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BU of 5owf by Molmil
Structure of a LAO-binding protein mutant with glutamine
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLUTAMINE, ...
Authors:Shanmugaratnam, S, Banda-Vazquez, J, Sosa-Peinado, A, Hocker, B.
Deposit date:2017-08-31
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Redesign of LAOBP to bind novel l-amino acid ligands.
Protein Sci., 27, 2018

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PDB entries from 2024-09-18

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