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3NW4
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Crystal Structure of Salicylate 1,2-dioxygenase G106A mutant from Pseudoaminobacter salicylatoxidans in complex with gentisate
Descriptor: 2,5-dihydroxybenzoic acid, FE (II) ION, GLYCEROL, ...
Authors:Ferraroni, M, Briganti, F, Matera, I.
Deposit date:2010-07-09
Release date:2011-07-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate.
FEBS J., 280, 2013
5U55
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Psf4 in complex with Mn2+ and (S)-2-HPP
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5U5D
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Psf4 in complex with Mn2+ and (R)-2-HPP
Descriptor: (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5TG0
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BU of 5tg0 by Molmil
Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with iron and zinc
Descriptor: FE (III) ION, ZINC ION, dimethylsulfoniopropionate lyase DddK
Authors:Schnicker, N.J, Dey, M.
Deposit date:2016-09-27
Release date:2017-06-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter.
Biochemistry, 56, 2017
5U58
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Psf4 in complex with Fe2+ and (R)-2-HPP
Descriptor: (S)-2-hydroxypropylphosphonic acid epoxidase, FE (III) ION, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
3NJZ
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Crystal Structure of Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans Adducts with salicylate
Descriptor: 2-HYDROXYBENZOIC ACID, FE (II) ION, GLYCEROL, ...
Authors:Ferraroni, M, Briganti, F, Matera, I.
Deposit date:2010-06-18
Release date:2011-07-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of salicylate 1,2-dioxygenase-substrates adducts: A step towards the comprehension of the structural basis for substrate selection in class III ring cleaving dioxygenases.
J.Struct.Biol., 177, 2012
3NL1
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Crystal Structure of Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans Adducts with gentisate
Descriptor: 2,5-dihydroxybenzoic acid, FE (II) ION, GLYCEROL, ...
Authors:Ferraroni, M, Briganti, F, Matera, I.
Deposit date:2010-06-21
Release date:2011-07-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.155 Å)
Cite:Crystal structures of salicylate 1,2-dioxygenase-substrates adducts: A step towards the comprehension of the structural basis for substrate selection in class III ring cleaving dioxygenases.
J.Struct.Biol., 177, 2012
5UQP
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BU of 5uqp by Molmil
The crystal structure of cupin protein from Rhodococcus jostii RHA1
Descriptor: CHLORIDE ION, Cupin, SULFATE ION, ...
Authors:Tan, K, Li, H, Clancy, S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2017-02-08
Release date:2017-02-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of cupin protein from Rhodococcus jostii RHA1
To Be Published
2DCT
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BU of 2dct by Molmil
Crystal structure of the TT1209 from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, SODIUM ION, hypothetical protein TTHA0104
Authors:Asada, Y, Sugahara, M, Shimizu, K, Yamamoto, H, Shimada, H, Nakamoto, T, Ono, N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-12
Release date:2006-01-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the TT1209 from Thermus thermophilus HB8
To be Published
2D40
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Crystal Structure of Z3393 from Escherichia coli O157:H7
Descriptor: FE (III) ION, putative gentisate 1,2-dioxygenase
Authors:Adams, M.A, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2005-10-05
Release date:2006-09-26
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural and biochemical characterization of gentisate 1,2-dioxygenase from Escherichia coli O157:H7
Mol.Microbiol., 61, 2006
2F4P
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BU of 2f4p by Molmil
Crystal structure of a cupin-like protein (tm1010) from thermotoga maritima msb8 at 1.90 A resolution
Descriptor: 1,2-ETHANEDIOL, UNKNOWN LIGAND, hypothetical protein TM1010
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-11-23
Release date:2006-01-24
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of hypothetical protein (tm1010) from THERMOTOGA MARITIMA at 1.90 A resolution
To be published
3H7J
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BU of 3h7j by Molmil
Crystal structure of BacB, an enzyme involved in Bacilysin synthesis, in monoclinic form
Descriptor: 3-PHENYLPYRUVIC ACID, Bacilysin biosynthesis protein bacB, COBALT (II) ION, ...
Authors:Rajavel, M, Gopal, B.
Deposit date:2009-04-27
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Role of Bacillus subtilis BacB in the synthesis of bacilysin
J.Biol.Chem., 284, 2009
3H50
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BU of 3h50 by Molmil
CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION
Descriptor: ACETATE ION, Tetracenomycin polyketide synthesis protein, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-21
Release date:2009-05-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.
Acta Crystallogr.,Sect.F, 66, 2010
3H7Y
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Crystal structure of BacB, an enzyme involved in Bacilysin synthesis, in tetragonal form
Descriptor: 3-PHENYLPYRUVIC ACID, Bacilysin biosynthesis protein bacB, COBALT (II) ION, ...
Authors:Rajavel, M, Gopal, B.
Deposit date:2009-04-28
Release date:2009-09-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Role of Bacillus subtilis BacB in the synthesis of bacilysin
J.Biol.Chem., 284, 2009
3I7D
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BU of 3i7d by Molmil
Crystal structure of sugar phosphate isomerase from a cupin superfamily SPO2919 from Silicibacter pomeroyi (YP_168127.1) from SILICIBACTER POMEROYI DSS-3 at 2.30 A resolution
Descriptor: ACETATE ION, CACODYLATE ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-07-08
Release date:2009-07-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of sugar phosphate isomerase from a cupin superfamily SPO2919 from Silicibacter pomeroyi (YP_168127.1) from SILICIBACTER POMEROYI DSS-3 at 2.30 A resolution
To be published
3IBM
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CRYSTAL STRUCTURE OF cupin 2 domain-containing protein Hhal_0468 FROM Halorhodospira halophila
Descriptor: Cupin 2, conserved barrel domain protein, GLYCEROL, ...
Authors:Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-16
Release date:2009-07-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURE OF cupin 2 domain-containing PROTEIN Hhal_0468 FROM Halorhodospira halophila
To be Published
3JZV
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Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.
Descriptor: MANGANESE (II) ION, uncharacterized protein Rru_A2000
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-24
Release date:2009-10-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.
To be Published
3HT1
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BU of 3ht1 by Molmil
1.2A structure of the polyketide cyclase RemF from Streptomyces resistomycificus
Descriptor: NICKEL (II) ION, RemF protein
Authors:Silvennoinen, L, Sandalova, T, Schneider, G.
Deposit date:2009-06-11
Release date:2009-10-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The polyketide cyclase RemF from Streptomyces resistomycificus contains an unusual octahedral zinc binding site
Febs Lett., 583, 2009
3HT2
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BU of 3ht2 by Molmil
Zink containing polyketide cyclase RemF from Streptomyces resistomycificus
Descriptor: RemF protein, ZINC ION
Authors:Silvennoinen, L, Sandalova, T, Schneider, G.
Deposit date:2009-06-11
Release date:2009-10-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The polyketide cyclase RemF from Streptomyces resistomycificus contains an unusual octahedral zinc binding site
Febs Lett., 583, 2009
3H9A
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BU of 3h9a by Molmil
Crystal structure of BacB, an enzyme involved in Bacilysin synthesis, in triclinic form
Descriptor: 3-PHENYLPYRUVIC ACID, Bacilysin biosynthesis protein bacB, COBALT (II) ION, ...
Authors:Rajavel, M, Gopal, B.
Deposit date:2009-04-30
Release date:2010-03-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Analysis of multiple crystal forms of Bacillus subtilis BacB suggests a role for a metal ion as a nucleant for crystallization
Acta Crystallogr.,Sect.D, 66, 2010
3H8U
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Crystal structure of uncharacterized conserved protein with double-stranded beta-helix domain (YP_001338853.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.80 A resolution
Descriptor: GLYCEROL, NONAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-29
Release date:2009-05-12
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of uncharacterized conserved protein with double-stranded beta-helix domain (YP_001338853.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.80 A resolution
To be published
3KGZ
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Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris
Descriptor: Cupin 2 conserved barrel domain protein, MANGANESE (II) ION
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Do, J, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-29
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris
To be Published
8E8W
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BU of 8e8w by Molmil
Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 mononuclear Fe(II) structure on the HDO cofactor assembly pathway
Descriptor: Cupin domain-containing diiron protein, FE (II) ION
Authors:McBride, M.J, Boal, A.K.
Deposit date:2022-08-25
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 mononuclear Fe(II) structure on the HDO cofactor assembly pathway
To Be Published
6XCV
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BU of 6xcv by Molmil
Crystal structure of apo SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697
Descriptor: Cupin domain-containing diiron protein
Authors:McBride, M.J, Boal, A.K.
Deposit date:2020-06-09
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure and assembly of the diiron cofactor in the heme-oxygenase-like domain of the N -nitrosourea-producing enzyme SznF.
Proc.Natl.Acad.Sci.USA, 118, 2021
6VZY
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BU of 6vzy by Molmil
Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 with a diiron(II) central domain cofactor
Descriptor: Cupin domain-containing diiron protein, FE (II) ION
Authors:McBride, M.J, Boal, A.K.
Deposit date:2020-02-28
Release date:2021-01-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure and assembly of the diiron cofactor in the heme-oxygenase-like domain of the N -nitrosourea-producing enzyme SznF.
Proc.Natl.Acad.Sci.USA, 118, 2021

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