Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3I5Y
DownloadVisualize
BU of 3i5y by Molmil
Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP
Descriptor: 5'-R(*UP*UP*UP*(5BU)P*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase MSS116, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2009-07-06
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA
Mol.Cell, 35, 2009
5N8R
DownloadVisualize
BU of 5n8r by Molmil
Crystal Structure of Drosophilia DHX36 helicase in complex with GAGCACTGC
Descriptor: CG9323, isoform A, DNA (5'-D(P*GP*AP*GP*CP*AP*CP*TP*GP*C)-3')
Authors:Chen, W.-F, Rety, S, Hai-Lei Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N9F
DownloadVisualize
BU of 5n9f by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with ssDNA CpG_A
Descriptor: CG9323, isoform A, CHLORIDE ION, ...
Authors:Chen, W.-F, Rety, S, Hai-Lei Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.969 Å)
Cite:Structural and mechanistic insights into DHX36-mediated innate immunity and G-quadruplex unfolding
To Be Published
4ON9
DownloadVisualize
BU of 4on9 by Molmil
DECH box helicase domain
Descriptor: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX58, SULFATE ION
Authors:Deimling, T, Witte, G, Hopfner, K.P.
Deposit date:2014-01-28
Release date:2014-07-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal and solution structure of the human RIG-I SF2 domain
Acta Crystallogr.,Sect.F, 70, 2014
5N9A
DownloadVisualize
BU of 5n9a by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with GTTAGGGTT
Descriptor: CG9323, isoform A, DNA (5'-D(P*GP*TP*TP*AP*GP*GP*GP*TP*T)-3')
Authors:Chen, W.-F, Rety, S, Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.036 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
4QU4
DownloadVisualize
BU of 4qu4 by Molmil
Improved refinement of the Mtr4 apo crystal structure
Descriptor: ATP-dependent RNA helicase DOB1, PHOSPHATE ION
Authors:Johnson, S.J, Taylor, L.L.
Deposit date:2014-07-10
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.392 Å)
Cite:The Mtr4 ratchet helix and arch domain both function to promote RNA unwinding.
Nucleic Acids Res., 42, 2014
3I62
DownloadVisualize
BU of 3i62 by Molmil
Structure of Mss116p bound to ssRNA and ADP-Aluminum Fluoride
Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase MSS116, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2009-07-06
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA
Mol.Cell, 35, 2009
5OOQ
DownloadVisualize
BU of 5ooq by Molmil
Structure of the Mtr4 Nop53 Complex
Descriptor: ATP-dependent RNA helicase DOB1, Ribosome biogenesis protein NOP53, SULFATE ION
Authors:Falk, S, Basquin, J, Conti, E.
Deposit date:2017-08-08
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the interaction of the nuclear exosome helicase Mtr4 with the preribosomal protein Nop53.
RNA, 23, 2017
3I61
DownloadVisualize
BU of 3i61 by Molmil
Structure of Mss116p bound to ssRNA and ADP-Beryllium Fluoride
Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase MSS116, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2009-07-06
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA
Mol.Cell, 35, 2009
4Q47
DownloadVisualize
BU of 4q47 by Molmil
Structure of the DrRecQ Catalytic Core in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA helicase RecQ, ZINC ION
Authors:Chen, S.C, Yang, C.S, Chen, Y.
Deposit date:2014-04-14
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Crystal structure of Deinococcus radiodurans RecQ helicase catalytic core domain: the interdomain flexibility.
Biomed Res Int, 2014, 2014
4PXA
DownloadVisualize
BU of 4pxa by Molmil
DEAD-box RNA helicase DDX3X Cancer-associated mutant D354V
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX3X, PHOSPHATE ION
Authors:Epling, L.B, Grace, C.R, Lowe, B.R, Partridge, J.F, Enemark, E.J.
Deposit date:2014-03-22
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Cancer-Associated Mutants of RNA Helicase DDX3X Are Defective in RNA-Stimulated ATP Hydrolysis.
J.Mol.Biol., 427, 2015
4TMU
DownloadVisualize
BU of 4tmu by Molmil
Crystal structure of RecQ catalytic core from C. sakazakii bound to DNA
Descriptor: DNA (29-MER), RecQ, ZINC ION
Authors:Manthei, K.A, Keck, J.L.
Deposit date:2014-06-02
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanisms of DNA binding and unwinding in bacterial RecQ helicases.
Proc.Natl.Acad.Sci.USA, 112, 2015
8ALZ
DownloadVisualize
BU of 8alz by Molmil
Cryo-EM structure of ASCC3 in complex with ASC1
Descriptor: Activating signal cointegrator 1, Activating signal cointegrator 1 complex subunit 3, ZINC ION
Authors:Jia, J, Hilal, T, Loll, B, Wahl, M.C.
Deposit date:2022-08-01
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of ASCC3 in complex with ASC1
Nat Commun, 2023
8ARK
DownloadVisualize
BU of 8ark by Molmil
Crystal structure of DEAD-box protein Dbp2 in apo form
Descriptor: ATP-dependent RNA helicase DBP2
Authors:Rety, S, Xi, X.G.
Deposit date:2022-08-17
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Nonstructural N- and C-tails of Dbp2 confer the protein full helicase activities.
J.Biol.Chem., 299, 2023
8ARP
DownloadVisualize
BU of 8arp by Molmil
Crystal structure of DEAD-box protein Dbp2 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP2, MAGNESIUM ION, ...
Authors:Song, Q.X, Rety, S, Xi, X.G.
Deposit date:2022-08-17
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Nonstructural N- and C-tails of Dbp2 confer the protein full helicase activities.
J.Biol.Chem., 299, 2023
4KBG
DownloadVisualize
BU of 4kbg by Molmil
almost closed conformation of the helicase core of the RNA helicase Hera
Descriptor: Heat resistant RNA dependent ATPase, SULFATE ION
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2013-04-23
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Rearranging RNA structures at 75C? toward the molecular mechanism and physiological function of the thermus thermophilus DEAD-box helicase hera.
Biopolymers, 99, 2013
3PEW
DownloadVisualize
BU of 3pew by Molmil
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
Deposit date:2010-10-27
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEY
DownloadVisualize
BU of 3pey by Molmil
S. cerevisiae Dbp5 bound to RNA and ADP BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
Deposit date:2010-10-27
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
4LJY
DownloadVisualize
BU of 4ljy by Molmil
Crystal structure of RNA splicing effector Prp5 in complex with ADP
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhang, Z.-M, Li, J, Yang, F, Xu, Y, Zhou, J.
Deposit date:2013-07-05
Release date:2013-12-11
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Prp5p reveals interdomain interactions that impact spliceosome assembly.
Cell Rep, 5, 2013
4LK2
DownloadVisualize
BU of 4lk2 by Molmil
Crystal structure of RNA splicing effector Prp5
Descriptor: NICKEL (II) ION, Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Authors:Zhang, Z.-M, Li, J, Yang, F, Xu, Y, Zhou, J.
Deposit date:2013-07-05
Release date:2013-12-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of Prp5p reveals interdomain interactions that impact spliceosome assembly.
Cell Rep, 5, 2013
6KYV
DownloadVisualize
BU of 6kyv by Molmil
Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
Descriptor: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION
Authors:Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
6UV3
DownloadVisualize
BU of 6uv3 by Molmil
Crystal structure of the core domain of RNA helicase DDX17 with RNA pri-125a-oligo2
Descriptor: 125a-oligo2, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Ngo, T.D, Partin, A.C, Nam, Y.
Deposit date:2019-11-01
Release date:2020-01-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:RNA Specificity and Autoregulation of DDX17, a Modulator of MicroRNA Biogenesis.
Cell Rep, 29, 2019
6L5M
DownloadVisualize
BU of 6l5m by Molmil
Crystal structure of human DEAD-box RNA helicase DDX21 in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Nucleolar RNA helicase 2
Authors:Chen, Z.J, Hu, X.J, Zhou, Z, Li, J.X.
Deposit date:2019-10-24
Release date:2020-06-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis of Human Helicase DDX21 in RNA Binding, Unwinding, and Antiviral Signal Activation.
Adv Sci, 7, 2020
6UP2
DownloadVisualize
BU of 6up2 by Molmil
Crystal structure of the murine DHX36 helicase
Descriptor: CHLORIDE ION, Dhx36 protein, GLYCEROL
Authors:Chuenchor, W, Jiang, J, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of the murine DHX36 helicase
To be published
6UV0
DownloadVisualize
BU of 6uv0 by Molmil
Crystal structure of apo core domain of RNA helicase DDX17
Descriptor: MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX17
Authors:Ngo, T.D, Partin, A.C, Nam, Y.
Deposit date:2019-11-01
Release date:2020-01-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:RNA Specificity and Autoregulation of DDX17, a Modulator of MicroRNA Biogenesis.
Cell Rep, 29, 2019

219140

数据于2024-05-01公开中

PDB statisticsPDBj update infoContact PDBjnumon