PDB: 44484 resultsInfo pagesStatus searchChemie searchBIRD

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2FMJ	220-loop mutant of streptomyces griseus trypsin Descriptor: CALCIUM ION, SULFATE ION, Trypsin Authors: Page, M.J, Di Cera, E. Deposit date: 2006-01-09 Release date: 2006-05-23 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Conversion of trypsin into a Na(+)-activated enzyme. Biochemistry, 45, 2006
4IB0	X-ray Structure of cAMP dependent protein kinase A in complex with high Na+ concentration, ADP and phosphorylated peptide pSP20 Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Gerlits, O, Kovalevsky, A. Deposit date: 2012-12-07 Release date: 2013-12-11 Last modified: 2014-05-28 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Metal-Free cAMP-Dependent Protein Kinase Can Catalyze Phosphoryl Transfer. Biochemistry, 53, 2014
2KLT	Second Ca2+ binding domain of NCX1.3 Descriptor: Sodium/calcium exchanger 1 Authors: Hilge, M, Aelen, J, Foarce, A, Perrakis, A, Vuister, G.W. Deposit date: 2009-07-08 Release date: 2009-08-18 Last modified: 2022-03-16 Method: SOLUTION NMR Cite: Ca2+ regulation in the Na+/Ca2+ exchanger features a dual electrostatic switch mechanism. Proc.Natl.Acad.Sci.USA, 106, 2009
2KLS	Apo-form of the second Ca2+ binding domain of NCX1.4 Descriptor: Sodium/calcium exchanger 1 Authors: Hilge, M, Aelen, J, Foarce, A, Perrakis, A, Vuister, G.W. Deposit date: 2009-07-08 Release date: 2009-08-18 Last modified: 2022-03-16 Method: SOLUTION NMR Cite: Ca2+ regulation in the Na+/Ca2+ exchanger features a dual electrostatic switch mechanism. Proc.Natl.Acad.Sci.USA, 106, 2009
7DTC	voltage-gated sodium channel Nav1.5-E1784K Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 5 subunit alpha Authors: Yan, N, Pan, X, Li, Z. Deposit date: 2021-01-04 Release date: 2021-03-24 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structure of human Na v 1.5 reveals the fast inactivation-related segments as a mutational hotspot for the long QT syndrome. Proc.Natl.Acad.Sci.USA, 118, 2021
2MDF	NMR structure of a two-transmembrane segment TM VI-VII of NHE1 Descriptor: Sodium/hydrogen exchanger 1 Authors: Lee, B.L, Sykes, B.D, Alves, C, Fliegel, L. Deposit date: 2013-09-10 Release date: 2014-07-02 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Structural and Functional Analysis of the Transmembrane Segment Pair VI and VII of the NHE1 Isoform of the Na(+)/H(+) Exchanger. Biochemistry, 53, 2014
3X3B	Crystal structure of the light-driven sodium pump KR2 in acidic state Descriptor: DI(HYDROXYETHYL)ETHER, OLEIC ACID, RETINAL, ... Authors: Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O. Deposit date: 2015-01-18 Release date: 2015-04-08 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump Nature, 521, 2015
3X3C	Crystal structure of the light-driven sodium pump KR2 in neutral state Descriptor: OLEIC ACID, RETINAL, Sodium pumping rhodopsin Authors: Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O. Deposit date: 2015-01-18 Release date: 2015-04-08 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump Nature, 521, 2015
5MV2	Crystal structure of the E protein of the Japanese encephalitis live attenuated vaccine virus Descriptor: E protein Authors: Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J. Deposit date: 2017-01-14 Release date: 2018-05-23 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism. Protein Cell, 10, 2019
8H0H	Hypotethical protein from Mycobacterium tuberculsosis Descriptor: Uncharacterized protein Rv1546 Authors: Kim, D.H, Na, Y, Lee, B.J. Deposit date: 2022-09-29 Release date: 2023-09-06 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis. Protein Sci., 32, 2023
8H2D	The hypothetical protein from Mycobacterium tuberculosis mutant - E47A Descriptor: Uncharacterized protein Rv1546 Authors: Kim, D.H, Na, Y, Lee, B.J. Deposit date: 2022-10-05 Release date: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis. Protein Sci., 32, 2023
3E89	Crystal Structure of the the open NaK channel-low Na+ complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CESIUM ION, Potassium channel protein, ... Authors: Jiang, Y, Alam, A. Deposit date: 2008-08-19 Release date: 2008-12-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural analysis of ion selectivity in the NaK channel Nat.Struct.Mol.Biol., 16, 2009
3E8G	Crystal Structure of the the open NaK channel-Na+/Ca2+ complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CESIUM ION, ... Authors: Jiang, Y, Alam, A. Deposit date: 2008-08-19 Release date: 2008-12-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural analysis of ion selectivity in the NaK channel Nat.Struct.Mol.Biol., 16, 2009
4ZPX	Crystal structure of Lon ATPase domain from Thermococcus onnurineus NA1 Descriptor: ATP-dependent protease Lon, GLYCEROL Authors: An, Y.J, Kim, M.I, Na, J.H, Cha, S.S. Deposit date: 2015-05-08 Release date: 2016-05-11 Last modified: 2020-02-19 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Structural disparity classifies AAA+ modules of Lon proteases into two distinct clades To Be Published
6V6T	Solution structure of delta-theraphotoxin-Hm1b from Heteroscodra maculata Descriptor: Delta-theraphotoxin-Hm1b Authors: Chin, Y.K.Y, Chow, C.Y, King, G.F. Deposit date: 2019-12-05 Release date: 2020-05-13 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: A selective Na V 1.1 activator with potential for treatment of Dravet syndrome epilepsy. Biochem Pharmacol, 181, 2020
5F1F	Crystal structure of CMY-10 adenylylated by acetyl-AMP Descriptor: ADENOSINE MONOPHOSPHATE, Beta-lactamase, CADMIUM ION Authors: An, Y.J, Kim, M.K, Na, J.H, Cha, S.S. Deposit date: 2015-11-30 Release date: 2016-12-07 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.548 Å) Cite: Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine. J.Antimicrob.Chemother., 72, 2017
7WFW	Apo human Nav1.8 Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-27 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WEL	Human Nav1.8 with A-803467, class II Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-23 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WE4	Human Nav1.8 with A-803467, class I Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-22 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WFR	Human Nav1.8 with A-803467, class III Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-27 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
2NX9	Crystal structure of the carboxyltransferase domain of the oxaloacetate decarboxylase Na+ pump from Vibrio cholerae Descriptor: Oxaloacetate decarboxylase 2, subunit alpha, ZINC ION Authors: Studer, R, Dimroth, P. Deposit date: 2006-11-17 Release date: 2006-12-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of the Carboxyltransferase Domain of the Oxaloacetate Decarboxylase Na(+) Pump from Vibrio cholerae. J.Mol.Biol., 367, 2007
7YS5	RET G-quadruplex in 10mM Na+ Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3') Authors: Yin, S, Cao, C. Deposit date: 2022-08-11 Release date: 2023-09-06 Last modified: 2023-09-13 Method: SOLUTION NMR Cite: RET G-quadruplex in 10mM Na+ To Be Published
1HXF	HUMAN THROMBIN COMPLEX WITH HIRUDIN VARIANT Descriptor: HIRUDIN VARIANT, THROMBIN Authors: Tulinsky, A, Zhang, E. Deposit date: 1996-09-09 Release date: 1997-01-27 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The molecular environment of the Na+ binding site of thrombin. Biophys.Chem., 63, 1997
1HXE	SERINE PROTEASE Descriptor: HIRUDIN VARIANT-1, RUBIDIUM ION, THROMBIN Authors: Tulinsky, A, Zhang, E. Deposit date: 1995-12-07 Release date: 1996-11-08 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The molecular environment of the Na+ binding site of thrombin. Biophys.Chem., 63, 1997
7CJ2	Crystal structure of the Fab antibody complexed with human YKL-40 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 3-like 1 (Cartilage glycoprotein-39), isoform CRA_a, ... Authors: Choi, S, Na, J.H, Lee, S.J, Woo, J.R, Kim, D.Y, Hong, J.T, Lee, W.K. Deposit date: 2020-07-09 Release date: 2021-07-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structure of the Fab antibody complexed with human YKL-40 To Be Published

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