PDB: 131 件ウェブページステータス検索Chemie searchBIRD

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2OEJ	Crystal structure of a rubisco-like protein from Geobacillus kaustophilus (tetramutant form), liganded with phosphate ions 分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, PHOSPHATE ION 著者 Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A. 登録日 2006-12-30 公開日 2007-03-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus. Biochemistry, 46, 2007
2OEM	Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and 2,3-diketohexane 1-phosphate 分子名称: (1Z)-2-HYDROXY-3-OXOHEX-1-EN-1-YL DIHYDROGEN PHOSPHATE, 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, MAGNESIUM ION 著者 Fedorov, A.A, Imker, H.J, Fedorov, E.V, Gerlt, J.A, Almo, S.C. 登録日 2006-12-30 公開日 2007-03-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus. Biochemistry, 46, 2007
5NV3	Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Bracher, A, Milicic, G, Ciniawsky, S, Wendler, P, Hayer-Hartl, M, Hartl, F.U. 登録日 2017-05-03 公開日 2017-07-26 最終更新日 2017-09-20 実験手法 ELECTRON MICROSCOPY (3.39 Å) 主引用文献 Mechanism of Enzyme Repair by the AAA(+) Chaperone Rubisco Activase. Mol. Cell, 67, 2017
6HBC	Structure of the repeat unit in the network formed by CcmM and Rubisco from Synechococcus elongatus 分子名称: Carbon dioxide concentrating mechanism protein CcmM, Ribulose 1,5-bisphosphate carboxylase small subunit, Ribulose bisphosphate carboxylase large chain 著者 Wang, H, Yan, X, Aigner, H, Bracher, A, Nguyen, N.D, Hee, W.Y, Long, B.M, Price, G.D, Hartl, F.U, Hayer-Hartl, M. 登録日 2018-08-10 公開日 2018-12-12 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Rubisco condensate formation by CcmM in beta-carboxysome biogenesis. Nature, 566, 2019
6KKM	Crystal structure of RbcL-Raf1 complex from Anabaena sp. PCC 7120 分子名称: All5250 protein, Ribulose bisphosphate carboxylase large chain 著者 Xia, L.Y, Jiang, Y.L, Kong, W.W, Chen, Y, Zhou, C.Z. 登録日 2019-07-26 公開日 2020-05-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular basis for the assembly of RuBisCO assisted by the chaperone Raf1. Nat.Plants, 6, 2020
6IUS	A higher kcat Rubisco 分子名称: Ribulose-1,5-bisphosphate carboxylase/oxygenase 著者 Li, Y, Cai, Z. 登録日 2018-11-30 公開日 2019-12-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 A higher kcat Rubisco To Be Published
2OEK	Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions 分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, MAGNESIUM ION 著者 Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A. 登録日 2006-12-30 公開日 2007-03-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus. Biochemistry, 46, 2007
8IOL	The complex of Rubisco large subunit (RbcL) 分子名称: Ribulose bisphosphate carboxylase large chain 著者 Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R. 登録日 2023-03-11 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly. Mol Plant, 16, 2023
8IO2	The Rubisco assembly intermidate of Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1) and Rubisco large subunit (RbcL) 分子名称: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic 著者 Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R. 登録日 2023-03-10 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly. Mol Plant, 16, 2023
8ILB	The complexes of RbcL, AtRaf1 and AtBSD2 (LFB) 分子名称: Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, Ribulose bisphosphate carboxylase large chain, ... 著者 Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R. 登録日 2023-03-03 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly. Mol Plant, 16, 2023
8IOJ	The Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1) 分子名称: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic 著者 Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R. 登録日 2023-03-11 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly. Mol Plant, 16, 2023
8ILM	The cryo-EM structure of eight Rubisco large subunits (RbcL), two Arabidopsis thaliana Rubisco accumulation factors 1 (AtRaf1), and seven Arabidopsis thaliana Bundle Sheath Defective 2 (AtBSD2) 分子名称: Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, Ribulose bisphosphate carboxylase large chain, ... 著者 Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R. 登録日 2023-03-03 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly. Mol Plant, 16, 2023
1AUS	ACTIVATED UNLIGANDED SPINACH RUBISCO 分子名称: FORMIC ACID, MAGNESIUM ION, RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE 著者 Taylor, T.C, Andersson, I. 登録日 1995-06-21 公開日 1995-10-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a product complex of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry, 36, 1997
1BWV	Activated Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase (RUBISCO) Complexed with the Reaction Intermediate Analogue 2-Carboxyarabinitol 1,5-Bisphosphate 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE) 著者 Sugawara, H, Yamamoto, H, Shibata, N, Inoue, T, Miyake, C, Yokota, A, Kai, Y. 登録日 1998-09-29 公開日 1999-09-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of carboxylase reaction-oriented ribulose 1, 5-bisphosphate carboxylase/oxygenase from a thermophilic red alga, Galdieria partita. J.Biol.Chem., 274, 1999
1BXN	THE CRYSTAL STRUCTURE OF RUBISCO FROM ALCALIGENES EUTROPHUS TO 2.7 ANGSTROMS. 分子名称: PHOSPHATE ION, PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN), PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) 著者 Hansen, S, Vollan, V.B, Hough, E, Andersen, K. 登録日 1998-10-06 公開日 1999-10-06 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The crystal structure of rubisco from Alcaligenes eutrophus reveals a novel central eight-stranded beta-barrel formed by beta-strands from four subunits. J.Mol.Biol., 288, 1999
1AA1	ACTIVATED SPINACH RUBISCO IN COMPLEX WITH THE PRODUCT 3-PHOSPHOGLYCERATE 分子名称: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, RIBULOSE BISPHOSPHATE CARBOXYLASE (LARGE CHAIN), ... 著者 Taylor, T.C, Andersson, I. 登録日 1997-01-20 公開日 1997-07-07 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a product complex of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry, 36, 1997
1EJ7	CRYSTAL STRUCTURE OF UNACTIVATED TOBACCO RUBISCO WITH BOUND PHOSPHATE IONS 分子名称: PHOSPHATE ION, RUBISCO (LARGE SUBUNIT), RUBISCO (SMALL SUBUNIT) 著者 Duff, A.P, Andrews, T.J, Curmi, P.M.G. 登録日 2000-03-01 公開日 2000-03-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 The transition between the open and closed states of rubisco is triggered by the inter-phosphate distance of the bound bisphosphate. J.Mol.Biol., 298, 2000
3A12	Crystal structure of Type III Rubisco complexed with 2-CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-03-25 公開日 2010-04-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010
3A13	Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP and activated with Ca 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ... 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-03-25 公開日 2010-04-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structure-based optimization of a Type III Rubisco from a hyperthermophile To be Published
2YBV	STRUCTURE OF RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS 分子名称: CHLORIDE ION, RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN, RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL SUBUNIT 著者 Terlecka, B, Wilhelmi, V, Bialek, W, Gubernator, B, Szczepaniak, A, Hofmann, E. 登録日 2011-03-10 公開日 2012-03-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase from Thermosynechococcus Elongatus To be Published
2ZVI	Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis 分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 著者 Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H. 登録日 2008-11-07 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis Acta Crystallogr.,Sect.D, 65, 2009
3AXM	Structure of rice Rubisco in complex with 6PG 分子名称: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
3AXK	Structure of rice Rubisco in complex with NADP(H) 分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
2RUS	CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE, MG(II), AND ACTIVATOR CO2 AT 2.3-ANGSTROMS RESOLUTION 分子名称: FORMYL GROUP, MAGNESIUM ION, RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE) 著者 Lundqvist, T, Schneider, G. 登録日 1991-10-11 公開日 1991-10-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the ternary complex of ribulose-1,5-bisphosphate carboxylase, Mg(II), and activator CO2 at 2.3-A resolution. Biochemistry, 30, 1991
5HJX	Structure function studies of R. palustris RubisCO (A47V mutant; CABP-bound) 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Arbing, M.A, Shin, A, Satagopan, S, North, J.A, Tabita, F.R. 登録日 2016-01-13 公開日 2017-01-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.799 Å) 主引用文献 Structure function studies of R. palustris RubisCO. To Be Published

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