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5SZB
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BU of 5szb by Molmil
Structure of human Dpf3 double-PHD domain bound to histone H3 tail peptide with acetylated K14
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Histone H3 tail peptide, ZINC ION, ...
Authors:Singh, N, Local, A, Shiau, A, Ren, B, Corbett, K.D.
Deposit date:2016-08-13
Release date:2017-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Identification of H3K4me1-associated proteins at mammalian enhancers.
Nat. Genet., 50, 2018
5Y2F
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BU of 5y2f by Molmil
Human SIRT6 in complex with allosteric activator MDL-801
Descriptor: 5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acid, 9-mer peptide QTARKSTGG, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhang, J, Huang, Z, Song, K.
Deposit date:2017-07-25
Release date:2018-11-07
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Identification of a cellularly active SIRT6 allosteric activator.
Nat. Chem. Biol., 14, 2018
5T0K
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BU of 5t0k by Molmil
Structure of G9a SET-domain with H3K9M mutant peptide and SAM
Descriptor: H3K9 mutant peptide, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
Authors:Xu, K, Tong, L.
Deposit date:2016-08-16
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading.
Elife, 5, 2016
5T0M
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BU of 5t0m by Molmil
A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading
Descriptor: Histone-lysine N-methyltransferase EHMT2, S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLMETHIONINE, ...
Authors:Xu, K, Tong, L.
Deposit date:2016-08-16
Release date:2016-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading.
Elife, 5, 2016
5SVX
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BU of 5svx by Molmil
MORC3 CW in complex with histone H3K4me3
Descriptor: H3K4me3, MORC family CW-type zinc finger protein 3, ZINC ION
Authors:Tong, Q, Andrews, F.H, Kutateladze, T.G.
Deposit date:2016-08-08
Release date:2016-10-05
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase.
Cell Rep, 16, 2016
5SVY
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BU of 5svy by Molmil
MORC3 CW in complex with histone H3K4me1
Descriptor: ACETATE ION, H3K4me1, MORC family CW-type zinc finger protein 3, ...
Authors:Tong, Q, Andrews, F.H, Kutateladze, T.G.
Deposit date:2016-08-08
Release date:2016-10-05
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase.
Cell Rep, 16, 2016
5T8R
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BU of 5t8r by Molmil
Crystal structure of human BAZ2A PHD zinc finger in complex with unmodified H3 10-mer
Descriptor: Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, Histone H3.1, ...
Authors:Amato, A, Gadd, M.S, Bortoluzzi, A, Ciulli, A.
Deposit date:2016-09-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.
Biochem. J., 474, 2017
5YE3
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BU of 5ye3 by Molmil
Crystal structure of the complex of di-acetylated histone H4 and 2A7D9 Fab fragment
Descriptor: 2A7D9 L chain, 2A7D9 VH CH1 chain, di-acetylated histone H4
Authors:Matsuda, T, Ito, T, Wakamori, M, Umehara, T.
Deposit date:2017-09-15
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:JQ1 affects BRD2-dependent and independent transcription regulation without disrupting H4-hyperacetylated chromatin states.
Epigenetics, 13, 2018
5TBN
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BU of 5tbn by Molmil
Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide
Descriptor: Histone H3.1, PHD finger protein 20, ZINC ION
Authors:Cui, G, Botuyan, M.V, Mer, G.
Deposit date:2016-09-12
Release date:2016-10-12
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:PHF20 Readers Link Methylation of Histone H3K4 and p53 with H4K16 Acetylation.
Cell Rep, 17, 2016
7KLR
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BU of 7klr by Molmil
Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide
Descriptor: Histone H3.1, Lysine-specific demethylase 5A, ZINC ION
Authors:Longbotham, E.J, Kelly, M.J.S, Fujimori, D.G.
Deposit date:2020-10-31
Release date:2021-03-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A.
Acs Chem.Biol., 2021
5TDW
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BU of 5tdw by Molmil
Set3 PHD finger in complex with histone H3K4me3
Descriptor: SET domain-containing protein 3, SODIUM ION, ZINC ION, ...
Authors:Andrews, F.H, Ali, M, Kutateladze, T.G.
Deposit date:2016-09-19
Release date:2016-10-19
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Insight into Recognition of Methylated Histone H3K4 by Set3.
J. Mol. Biol., 429, 2017
5LUG
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BU of 5lug by Molmil
Crystal structure of human Spindlin-2B protein in complex with ART(M3L)QTA(2MR)KS peptide
Descriptor: 1,2-ETHANEDIOL, ALA-ARG-THR-M3L-GLN-THR-ALA-2MR-LYS-SER, N3, ...
Authors:Srikannathasan, V, Gileadi, C, Talon, R, Shrestha, L, Kopec, J, Szykowska, A, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Oppermann, U, Huber, K.
Deposit date:2016-09-08
Release date:2017-09-20
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human Spindlin-2B protein in complex with ART(M3L)QTA(2MR)KS peptide
To be published
5TDR
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BU of 5tdr by Molmil
Set3 PHD finger in complex with histone H3K4me2
Descriptor: Histone H3, SET domain-containing protein 3, SODIUM ION, ...
Authors:Andrews, F.H, Ali, M, Kutateladze, T.G.
Deposit date:2016-09-19
Release date:2016-11-02
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Insight into Recognition of Methylated Histone H3K4 by Set3.
J. Mol. Biol., 429, 2017
5ZOF
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BU of 5zof by Molmil
Crystal Structure of D181A/R192F hFen1 in complex with DNA
Descriptor: DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*G)-3'), DNA (5'-D(*CP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*CP*GP*TP*CP*C)-3'), ...
Authors:Han, W, Hua, Y, Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
7EBK
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BU of 7ebk by Molmil
Mouse Trim66 PHD-Bromo dual domain complexed with the H3(1-24)K9me3K18ac peptide
Descriptor: H3K9me3K18ac, Tripartite motif-containing protein 66, ZINC ION
Authors:Wang, Z, Jiang, J.
Deposit date:2021-03-09
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A TRIM66/DAX1/Dux axis suppresses the totipotent 2-cell-like state in murine embryonic stem cells.
Cell Stem Cell, 29, 2022
7EIC
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BU of 7eic by Molmil
Crystal structure of AF9 YEATS domain in complex with H4K5acK8ac peptide
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Histone H4, ...
Authors:Kikuchi, M, Umehara, T.
Deposit date:2021-03-30
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Elucidation of binding preferences of YEATS domains to site-specific acetylated nucleosome core particles.
J.Biol.Chem., 298, 2022
5ZOE
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BU of 5zoe by Molmil
Crystal Structure of D181A hFen1 in complex with DNA
Descriptor: DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*G)-3'), DNA (5'-D(*CP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*CP*GP*TP*CP*C)-3'), ...
Authors:Han, W, Hua, Y, Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
5U2J
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BU of 5u2j by Molmil
MORF double PHD finger (DPF) in complex with histone H3K14bu
Descriptor: Histone H3K14bu, Histone acetyltransferase KAT6B, ZINC ION
Authors:Andrews, F.H, Klein, B.J, Kutateladze, T.G.
Deposit date:2016-11-30
Release date:2017-04-12
Last modified:2017-04-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Recognition of Histone H3K14 Acylation by MORF.
Structure, 25, 2017
7LBM
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BU of 7lbm by Molmil
Structure of the human Mediator-bound transcription pre-initiation complex
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Abdella, R, Talyzina, A, He, Y.
Deposit date:2021-01-08
Release date:2021-03-24
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of the human Mediator-bound transcription preinitiation complex.
Science, 372, 2021
5ZOD
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BU of 5zod by Molmil
Crystal Structure of hFen1 in apo form
Descriptor: Flap endonuclease 1, MAGNESIUM ION, POTASSIUM ION
Authors:Han, W, Hua, Y, Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
5ZOG
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BU of 5zog by Molmil
Crystal Structure of R192F hFen1 in complex with DNA
Descriptor: DNA (5'-D(*CP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*GP*AP*T)-3'), DNA (5'-D(P*TP*CP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*G)-3'), ...
Authors:Han, W, Hua, Y, Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
7M0T
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BU of 7m0t by Molmil
Crystal structure of the BRAF:MEK1 kinases in complex with AMPPNP and Selumetinib
Descriptor: 5-[(4-bromo-2-chlorophenyl)amino]-4-fluoro-N-(2-hydroxyethoxy)-1-methyl-1H-benzimidazole-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
Authors:Li, K, Gonzalez Del-Pino, G, Ha, B.H, Park, E, Eck, M.J.
Deposit date:2021-03-11
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Allosteric MEK inhibitors act on BRAF/MEK complexes to block MEK activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M0W
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BU of 7m0w by Molmil
Crystal structure of the BRAF:MEK1 kinases in complex with AMPPNP and Pimasertib
Descriptor: Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, N-[(2S)-2,3-dihydroxypropyl]-3-[(2-fluoro-4-iodophenyl)amino]pyridine-4-carboxamide, ...
Authors:Li, K, Gonzalez Del-Pino, G, Ha, B.H, Park, E, Eck, M.J.
Deposit date:2021-03-11
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Allosteric MEK inhibitors act on BRAF/MEK complexes to block MEK activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LBO
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BU of 7lbo by Molmil
Crystal structure of human Survivin bound to histone H3 T3phK4me1 peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3 T3phK4me1 peptide
Authors:Niedzialkowska, E, Minor, W, Stukenberg, P.T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tip60 acetylation of histone H3K4 temporally controls chromosome passenger complex localization.
Mol.Biol.Cell, 33, 2022
7LBQ
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BU of 7lbq by Molmil
Crystal structure of human Survivin bound to histone H3 T3phK4me2 peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3 T3phK4me2 peptide
Authors:Niedzialkowska, E, Minor, W, Stukenberg, P.T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Tip60 acetylation of histone H3K4 temporally controls chromosome passenger complex localization.
Mol.Biol.Cell, 33, 2022

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