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PDB: 75 results

3KDJ
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BU of 3kdj by Molmil
Complex structure of (+)-ABA-bound PYL1 and ABI1
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, MANGANESE (II) ION, Protein phosphatase 2C 56, ...
Authors:Yin, P, Fan, H, Hao, Q, Yuan, X, Yan, N.
Deposit date:2009-10-23
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.878 Å)
Cite:Structural insights into the mechanism of abscisic acid signaling by PYL proteins
Nat.Struct.Mol.Biol., 16, 2009
3KDI
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Structure of (+)-ABA bound PYL2
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Putative uncharacterized protein At2g26040
Authors:Yin, P, Fan, H, Hao, Q, Yuan, X, Yan, N.
Deposit date:2009-10-22
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.379 Å)
Cite:Structural insights into the mechanism of abscisic acid signaling by PYL proteins
Nat.Struct.Mol.Biol., 16, 2009
4GG4
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BU of 4gg4 by Molmil
Crystal structure of the TAL effector dHax3 bound to specific DNA-RNA hybrid
Descriptor: DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3, RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*UP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Yin, P, Deng, D, Yan, C.Y, Pan, X.J, Yan, N, Shi, Y.G.
Deposit date:2012-08-05
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Specific DNA-RNA hybrid recognition by TAL effectors
Cell Rep, 2, 2012
3KDH
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BU of 3kdh by Molmil
Structure of ligand-free PYL2
Descriptor: Putative uncharacterized protein At2g26040
Authors:Yin, P, Fan, H, Hao, Q, Yuan, X, Yan, N.
Deposit date:2009-10-22
Release date:2009-11-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Structural insights into the mechanism of abscisic acid signaling by PYL proteins
Nat.Struct.Mol.Biol., 16, 2009
4M59
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BU of 4m59 by Molmil
Crystal structure of the pentatricopeptide repeat protein PPR10 in complex with an 18-nt psaJ RNA element
Descriptor: Chloroplast pentatricopeptide repeat protein 10, PHOSPHATE ION, psaJ RNA
Authors:Yin, P, Li, Q, Yan, C, Liu, Y, Yan, N.
Deposit date:2013-08-08
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural basis for the modular recognition of single-stranded RNA by PPR proteins.
Nature, 504, 2013
4M57
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BU of 4m57 by Molmil
Crystal structure of the pentatricopeptide repeat protein PPR10 from maize
Descriptor: Chloroplast pentatricopeptide repeat protein 10
Authors:Yin, P, Li, Q, Yan, C, Liu, Y, Yan, N.
Deposit date:2013-08-08
Release date:2013-10-30
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural basis for the modular recognition of single-stranded RNA by PPR proteins.
Nature, 504, 2013
8W5J
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BU of 8w5j by Molmil
Cryo-EM structure of the yeast TOM core complex (from TOM-TIM23 complex)
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, ...
Authors:Wang, Q, Guan, Z.Y, Zhuang, J.J, Huang, R, Yin, P.
Deposit date:2023-08-27
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The architecture of substrate-engaged TOM-TIM23 supercomplex reveals preprotein proximity sites for mitochondrial protein translocation.
Cell Discov, 10, 2024
8W5K
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BU of 8w5k by Molmil
Cryo-EM structure of the yeast TOM core complex crosslinked by BS3 (from TOM-TIM23 complex)
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, ...
Authors:Wang, Q, Guan, Z.Y, Zhuang, J.J, Huang, R, Yin, P.
Deposit date:2023-08-27
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The architecture of substrate-engaged TOM-TIM23 supercomplex reveals preprotein proximity sites for mitochondrial protein translocation.
Cell Discov, 10, 2024
5JCB
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BU of 5jcb by Molmil
Microtubule depolymerizing agent podophyllotoxin derivative YJTSF1
Descriptor: (5R,5aR,8aS,9R)-9-[(4H-1,2,4-triazol-3-yl)sulfanyl]-5-(3,4,5-trimethoxyphenyl)-5,8,8a,9-tetrahydro-2H-furo[3',4':6,7]naphtho[2,3-d][1,3]dioxol-6(5aH)-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Guan, Z, Zhao, W, Yin, P.
Deposit date:2016-04-14
Release date:2017-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Inhibition of Tubulin by the Antitumor Agent 4 beta-(1,2,4-triazol-3-ylthio)-4-deoxypodophyllotoxin.
ACS Chem. Biol., 12, 2017
5IL1
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BU of 5il1 by Molmil
Crystal structure of SAM-bound METTL3-METTL14 complex
Descriptor: 1,2-ETHANEDIOL, METTL14, METTL3, ...
Authors:Wang, X, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-04
Release date:2016-05-25
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural basis of N6-adenosine methylation by the METTL3-METTL14 complex
Nature, 534, 2016
5IL0
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BU of 5il0 by Molmil
Crystal structural of the METTL3-METTL14 complex for N6-adenosine methylation
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, METTL14, ...
Authors:Wang, X, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-04
Release date:2016-05-25
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.882 Å)
Cite:Structural basis of N6-adenosine methylation by the METTL3-METTL14 complex
Nature, 534, 2016
5IL2
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BU of 5il2 by Molmil
Crystal structure of SAH-bound METTL3-METTL14 complex
Descriptor: 1,2-ETHANEDIOL, METTL14, METTL3, ...
Authors:Wang, X, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-04
Release date:2016-05-25
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:Structural basis of N6-adenosine methylation by the METTL3-METTL14 complex
Nature, 534, 2016
5ISY
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BU of 5isy by Molmil
Crystal structure of Nudix family protein with NAD
Descriptor: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Zhang, D, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-15
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.354 Å)
Cite:Structural basis of prokaryotic NAD-RNA decapping by NudC
Cell Res., 26, 2016
5IWW
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BU of 5iww by Molmil
Crystal structure of RNA editing factor of designer PLS-type PPR/9R protein in complex with MORF9/RIP9
Descriptor: Multiple organellar RNA editing factor 9, chloroplastic, PLS9-PPR
Authors:Yan, J, Zhang, Q, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-23
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:MORF9 increases the RNA-binding activity of PLS-type pentatricopeptide repeat protein in plastid RNA editing
Nat Plants, 3, 2017
5IWB
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BU of 5iwb by Molmil
Crystal structure of design pentatricopeptide repeat complex with MORF protein
Descriptor: Multiple organellar RNA editing factor 9, chloroplastic, PLS3-PPR
Authors:Yan, J, Zhang, Q, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-22
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.764 Å)
Cite:Structural basis for designer pentatricopeptide repeat proteins interaction with MORF protein
To be published
5IZW
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BU of 5izw by Molmil
Crystal structure of RNA editing specific factor of designer PLS-type PPR-9R protein
Descriptor: PLS9-PPR
Authors:Yan, J, Zhang, Q, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-26
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:MORF9 increases the RNA-binding activity of PLS-type pentatricopeptide repeat protein in plastid RNA editing
Nat Plants, 3, 2017
7YLQ
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BU of 7ylq by Molmil
Crystal structure of Microcystinase C from Sphingomonas sp. ACM-3962 at 2.6 A resolution
Descriptor: CALCIUM ION, Microcystinase C, ZINC ION
Authors:Guo, X, Li, Z, Ding, W, Yin, P, Feng, L.
Deposit date:2022-07-26
Release date:2023-08-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Crystal structure of Microcystin C from Sphingomonas sp. ACM-3962 at 2.6 A resolution
To Be Published
4DJK
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BU of 4djk by Molmil
Structure of glutamate-GABA antiporter GadC
Descriptor: Probable glutamate/gamma-aminobutyrate antiporter
Authors:Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G.
Deposit date:2012-02-02
Release date:2012-03-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Structure and mechanism of a glutamate-GABA antiporter
Nature, 483, 2012
4DJI
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BU of 4dji by Molmil
Structure of glutamate-GABA antiporter GadC
Descriptor: Probable glutamate/gamma-aminobutyrate antiporter
Authors:Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G.
Deposit date:2012-02-02
Release date:2012-03-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.187 Å)
Cite:Structure and mechanism of a glutamate-GABA antiporter
Nature, 483, 2012
7R6L
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BU of 7r6l by Molmil
5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct
Descriptor: Group I intron, 3 prime fragment plus 3 prime exon, 5 prime fragment, ...
Authors:Thelot, F, Liu, D, Liao, M, Yin, P.
Deposit date:2021-06-22
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Sub-3- angstrom cryo-EM structure of RNA enabled by engineered homomeric self-assembly.
Nat.Methods, 19, 2022
7R6M
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BU of 7r6m by Molmil
Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct
Descriptor: Group I intron, Ligated exon mimic of the Group I intron, MAGNESIUM ION
Authors:Thelot, F, Liu, D, Liao, M, Yin, P.
Deposit date:2021-06-22
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Sub-3- angstrom cryo-EM structure of RNA enabled by engineered homomeric self-assembly.
Nat.Methods, 19, 2022
3U1M
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BU of 3u1m by Molmil
Structure of the mRNA splicing complex component Cwc2
Descriptor: Pre-mRNA-splicing factor CWC2, ZINC ION
Authors:Lu, P, Lu, G, Yan, C, Wang, L, Li, W, Yin, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the mRNA splicing complex component Cwc2: insights into RNA recognition
Biochem.J., 441, 2012
3U1L
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BU of 3u1l by Molmil
Structure of the mRNA splicing complex component Cwc2
Descriptor: Pre-mRNA-splicing factor CWC2, ZINC ION
Authors:Lu, P, Lu, G, Yan, C, Wang, L, Li, W, Yin, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of the mRNA splicing complex component Cwc2: insights into RNA recognition
Biochem.J., 441, 2012
7R6N
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BU of 7r6n by Molmil
Exon-free state of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic trimeric construct
Descriptor: Group I intron, MAGNESIUM ION
Authors:Thelot, F, Liu, D, Liao, M, Yin, P.
Deposit date:2021-06-22
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Sub-3- angstrom cryo-EM structure of RNA enabled by engineered homomeric self-assembly.
Nat.Methods, 19, 2022
4GJP
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BU of 4gjp by Molmil
Crystal structure of the TAL effector dHax3 bound to dsDNA containing repetitive methyl-CpG
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*CP*T)-3'), Hax3, ...
Authors:Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
Deposit date:2012-08-10
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a protein complex
To be Published

 

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