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PDB: 48 results

8GW1
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BU of 8gw1 by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
Descriptor: Helicase, MANGANESE (II) ION, Non-structural protein 7, ...
Authors:Yan, L, Rao, Z, Lou, Z.
Deposit date:2022-09-16
Release date:2023-10-25
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8X7X
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BU of 8x7x by Molmil
Crystal structure of SADS-CoV fusion core
Descriptor: CHLORIDE ION, HR1, HR2
Authors:Yan, L.
Deposit date:2023-11-26
Release date:2024-02-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal Structures of Fusion Cores from CCoV-HuPn-2018 and SADS-CoV.
Viruses, 16, 2024
5YVD
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BU of 5yvd by Molmil
Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East Respiratory Syndrome Coronavirus
Descriptor: GLYCEROL, Nsp15
Authors:Yan, L, Zhang, L.
Deposit date:2017-11-24
Release date:2018-08-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Biochemical Characterization of Endoribonuclease Nsp15 Encoded by Middle East Respiratory Syndrome Coronavirus.
J. Virol., 92, 2018
5CB2
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BU of 5cb2 by Molmil
the structure of candida albicans Sey1p in complex with GMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein SEY1
Authors:Yan, L, Sun, S, Wang, W, Shi, J, Hu, X, Wang, S, Rao, Z, Hu, J, Lou, Z.
Deposit date:2015-06-30
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion
J.Cell Biol., 210, 2015
5CA9
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BU of 5ca9 by Molmil
Structures of the candida albicans sey1p GTPase in complex with GDPAlF4-
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein SEY1, ...
Authors:Yan, L.
Deposit date:2015-06-29
Release date:2015-09-23
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion
J.Cell Biol., 210, 2015
5CA8
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BU of 5ca8 by Molmil
Structures of the yeast dynamin-like GTPase Sey1p in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein SEY1
Authors:Yan, L.
Deposit date:2015-06-29
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion
J.Cell Biol., 210, 2015
5ZUV
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BU of 5zuv by Molmil
Crystal Structure of the Human Coronavirus 229E HR1 motif in complex with pan-CoVs inhibitor EK1
Descriptor: CHLORIDE ION, Spike glycoprotein,Spike glycoprotein,inhibitor EK1
Authors:Yan, L, Yang, B, Wilson, I.A.
Deposit date:2018-05-08
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike.
Sci Adv, 5, 2019
5ZVM
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BU of 5zvm by Molmil
Crystal Structure of the Human Coronavirus SARS HR1 motif in complex with pan-CoVs inhibitor EK1
Descriptor: Spike glycoprotein, pan-CoV inhibitory peptide EK1
Authors:Yan, L, Yang, B, Wilson, I.A.
Deposit date:2018-05-11
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike.
Sci Adv, 5, 2019
5ZVK
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BU of 5zvk by Molmil
Crystal Structure of the Human Coronavirus MERS HR1 motif in complex with pan-CoVs inhibitor EK1
Descriptor: Human Coronavirus MERS HR1 motif, pan-CoV inhibitory peptide EK1
Authors:Yan, L, Yang, B, Wilson, I.A.
Deposit date:2018-05-11
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike.
Sci Adv, 5, 2019
5GNU
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BU of 5gnu by Molmil
the structure of mini-MFN1 apo
Descriptor: Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Lou, Z, Rao, Z, Lou, J.
Deposit date:2016-07-25
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (4.113 Å)
Cite:BDLP-like folding of Mitofusin 1
To Be Published
5GNT
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BU of 5gnt by Molmil
BDLP-like folding of Mitofusin 1
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Rao, Z, Lou, Z, Hu, J.
Deposit date:2016-07-24
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.665 Å)
Cite:the structure of mini-MFN1 in complex with GDP
To Be Published
5GNR
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BU of 5gnr by Molmil
the structure of mini-MFN1 K88A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Lou, Z, Rao, Z, Hu, J.
Deposit date:2016-07-24
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:BDLP-like folding of Mitofusin 1
To Be Published
5GJK
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BU of 5gjk by Molmil
Crystal Structure of BAF47 and BAF155 Complex
Descriptor: GLYCEROL, PHOSPHATE ION, SWI/SNF complex subunit SMARCC1, ...
Authors:Yan, L, Qian, C.
Deposit date:2016-06-30
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:Structural Insights into BAF47 and BAF155 Complex Formation.
J. Mol. Biol., 429, 2017
5YEW
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BU of 5yew by Molmil
Structural basis for GTP hydrolysis and conformational change of mitofusin 1 in mediating mitochondrial fusion
Descriptor: BERYLLIUM TRIFLUORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yan, L, Qi, Y, Huang, X, Yu, C.
Deposit date:2017-09-20
Release date:2018-01-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for GTP hydrolysis and conformational change of MFN1 in mediating membrane fusion
Nat. Struct. Mol. Biol., 25, 2018
7CYQ
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BU of 7cyq by Molmil
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Helicase, MAGNESIUM ION, ...
Authors:Yan, L, Ge, J, Zheng, L, Zhang, Y, Gao, Y, Wang, T, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
Deposit date:2020-09-04
Release date:2020-12-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM Structure of an Extended SARS-CoV-2 Replication and Transcription Complex Reveals an Intermediate State in Cap Synthesis.
Cell, 184, 2021
7CXN
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BU of 7cxn by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
Descriptor: Helicase, Non-structural protein 7, Non-structural protein 8, ...
Authors:Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
Deposit date:2020-09-02
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
7CXM
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BU of 7cxm by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
Descriptor: Helicase, Non-structural protein 7, Non-structural protein 8, ...
Authors:Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
Deposit date:2020-09-02
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
6JYT
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BU of 6jyt by Molmil
Delicate structural coordination of the Severe Acute Respiratory Syndrome coronavirus Nsp13 upon ATP hydrolysis
Descriptor: Helicase, ZINC ION
Authors:Yan, L, Jia, Z.
Deposit date:2019-04-28
Release date:2019-09-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Delicate structural coordination of the Severe Acute Respiratory Syndrome coronavirus Nsp13 upon ATP hydrolysis.
Nucleic Acids Res., 47, 2019
6JSJ
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BU of 6jsj by Molmil
Structural analysis of a trimeric assembly of the mitochondrial dynamin-like GTPase Mgm1
Descriptor: Dynamin-like GTPase MGM1, mitochondrial, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Yan, L, Li, L.
Deposit date:2019-04-08
Release date:2020-02-19
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural analysis of a trimeric assembly of the mitochondrial dynamin-like GTPase Mgm1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7EIZ
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BU of 7eiz by Molmil
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Descriptor: Helicase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Yan, L, Yang, Y.X, Li, M.Y, Zhang, Y, Zheng, L.T, Ge, J, Huang, Y.C, Liu, Z.Y, Wang, T, Gao, S, Zhang, R, Huang, Y.Y, Guddat, L.W, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2021-04-01
Release date:2021-09-22
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY
Cite:Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Cell, 184, 2021
5YEJ
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BU of 5yej by Molmil
Crystal structure of BioQ with its naturel double-stranded DNA operator
Descriptor: DNA (5'-D(*AP*CP*CP*TP*GP*AP*AP*CP*AP*CP*CP*GP*TP*TP*CP*AP*AP*GP*T)-3'), DNA (5'-D(*AP*CP*TP*TP*GP*AP*AP*CP*GP*GP*TP*GP*TP*TP*CP*AP*GP*GP*T)-3'), TetR family transcriptional regulator
Authors:Yan, L, Guan, Z.Y, Zou, T.T.
Deposit date:2017-09-17
Release date:2018-09-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.698 Å)
Cite:Structural insights into operator recognition by BioQ in the Mycobacterium smegmatis biotin synthesis pathway.
Biochim Biophys Acta Gen Subj, 1862, 2018
5YEK
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BU of 5yek by Molmil
Crystal structure of BioQ
Descriptor: TetR family transcriptional regulator
Authors:Yan, L, Guan, Z.Y, Zou, T.T.
Deposit date:2017-09-17
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Structural insights into operator recognition by BioQ in the Mycobacterium smegmatis biotin synthesis pathway.
Biochim Biophys Acta Gen Subj, 1862, 2018
7EXE
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BU of 7exe by Molmil
Crystal structure of mouse 14-3-3zeta in complex with doubly phosphorylated ADAM22 peptide
Descriptor: 14-3-3 protein zeta/delta, Disintegrin and metalloproteinase domain-containing protein 22
Authors:Yan, L, Okatsu, K, Fukai, S.
Deposit date:2021-05-27
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:LGI1-ADAM22 levels regulate seizure thresholds through 14-3-3 in mice
Cell Rep, 2021
7EQ3
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BU of 7eq3 by Molmil
Apo diabody form of CRH2-directed antibody 9F8
Descriptor: 9F8 diabody, ACETATE ION
Authors:Yan, L.
Deposit date:2021-04-29
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Tall cytokine receptor signaling fine-tuning through dimer geometric reconstitution
To Be Published
7D3C
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BU of 7d3c by Molmil
The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Yan, L, Ren, Z.
Deposit date:2020-09-18
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The newly emerged SARS-like coronavirus HCoV-EMC also has an "Achilles' heel": current effective inhibitor targeting a 3C-like protease
Protein cell, 4, 2013

 

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