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PDB: 66 results

6XR7
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BU of 6xr7 by Molmil
Abl isoform 1b inactive1 state
Descriptor: Tyrosine-protein kinase ABL1
Authors:Xie, T, Saleh, T, Rossi, P, Kalodimos, C.G.
Deposit date:2020-07-11
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational states dynamically populated by a kinase determine its function.
Science, 370, 2020
6XR6
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BU of 6xr6 by Molmil
Abl 1b isoform active state
Descriptor: Tyrosine-protein kinase ABL1
Authors:Xie, T, Saleh, T, Rossi, P, Kalodimos, C.G.
Deposit date:2020-07-11
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational states dynamically populated by a kinase determine its function.
Science, 370, 2020
6XRG
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BU of 6xrg by Molmil
Abl 1b isoform inactive2 state
Descriptor: Tyrosine-protein kinase ABL1
Authors:Xie, T, Saleh, T, Rossi, P, Kalodimos, C.G.
Deposit date:2020-07-12
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational states dynamically populated by a kinase determine its function.
Science, 370, 2020
4R12
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BU of 4r12 by Molmil
Crystal structure of the gamma-secretase component Nicastrin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Xie, T, Yan, C, Zhou, R, Zhao, Y, Sun, L, Yang, G, Lu, P, Ma, D, Shi, Y.
Deposit date:2014-08-03
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the gamma-secretase component nicastrin.
Proc.Natl.Acad.Sci.USA, 111, 2014
6WPK
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BU of 6wpk by Molmil
SARM1 Autoinhibited Conformation
Descriptor: NAD(+) hydrolase SARM1
Authors:Xie, T, Bratkowski, M, Bai, X, Sambashivan, S.
Deposit date:2020-04-27
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and Mechanistic Regulation of the Prodegenerative NAD Hydrolase SARM1
Cell Rep, 32, 2020
8IAM
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BU of 8iam by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3D) complex
Descriptor: Chimera of Long chain base biosynthesis protein 1 and Serine palmitoyltransferase 1, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
8IAK
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BU of 8iak by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A-N71A) complex
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Protein ORM2, Serine palmitoyltransferase 2, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
8IAJ
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BU of 8iaj by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A) complex
Descriptor: N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, PYRIDOXAL-5'-PHOSPHATE, Protein ORM2, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
3WMS
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BU of 3wms by Molmil
The crystal structure of Y195I mutant alpha-cyclodextrin glycosyltransferase from Paenibacillus macerans
Descriptor: Alpha-cyclodextrin glucanotransferase, CALCIUM ION
Authors:Xie, T, Hou, Y.J, Li, D.F, Yue, Y, Qian, S.J, Chao, Y.P.
Deposit date:2013-11-24
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of a mutant Y195I alpha-cyclodextrin glycosyltransferase with switched product specificity from alpha-cyclodextrin to beta-/ gamma-cyclodextrin
J.Biotechnol., 182-183, 2014
2LKM
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BU of 2lkm by Molmil
Structural Basis for Molecular Interactions Involving MRG Domains: Implications in Chromatin Biology
Descriptor: Mortality factor 4-like protein 1, PHD finger protein 12
Authors:Xie, T, Radhakrishnan, I.
Deposit date:2011-10-16
Release date:2012-01-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for molecular interactions involving MRG domains: implications in chromatin biology.
Structure, 20, 2012
4Q8B
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BU of 4q8b by Molmil
The crystal structure of CotA laccase complexed with sinapic acid
Descriptor: CHLORIDE ION, COPPER (II) ION, MAGNESIUM ION, ...
Authors:Xie, T, Liu, Z.C, Wang, G.G.
Deposit date:2014-04-26
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The crystal structure of CotA laccase complexed with sinapic acid
To be Published
8IZD
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BU of 8izd by Molmil
Cryo-EM structure of the C26-CoA-bound Lac1-Lip1 complex
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, Ceramide synthase LAC1, Ceramide synthase subunit LIP1, ...
Authors:Xie, T, Fang, Q, Gong, X.
Deposit date:2023-04-07
Release date:2023-12-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structure and mechanism of a eukaryotic ceramide synthase complex.
Embo J., 42, 2023
8IZF
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BU of 8izf by Molmil
Cryo-EM structure of the Lac1-Lip1 (Lip1-S74F) complex
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, Ceramide synthase LAC1, Ceramide synthase subunit LIP1
Authors:Xie, T, Fang, Q, Gong, X.
Deposit date:2023-04-07
Release date:2023-12-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structure and mechanism of a eukaryotic ceramide synthase complex.
Embo J., 42, 2023
8S9P
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BU of 8s9p by Molmil
1:1:1 agrin/LRP4/MuSK complex
Descriptor: Agrin, Low-density lipoprotein receptor-related protein 4, Muscle, ...
Authors:Xie, T, Xu, G.J, Liu, Y, Quade, B, Lin, W.C, Bai, X.C.
Deposit date:2023-03-29
Release date:2023-05-17
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the assembly of the agrin/LRP4/MuSK signaling complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
2N1D
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BU of 2n1d by Molmil
Solution structure of the MRG15-MRGBP complex
Descriptor: MRG/MORF4L-binding protein, Mortality factor 4-like protein 1
Authors:Xie, T, Zmysloski, A.M, Zhang, Y, Radhakrishnan, I.
Deposit date:2015-03-27
Release date:2015-05-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis for Multi-specificity of MRG Domains.
Structure, 23, 2015
4M67
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BU of 4m67 by Molmil
Crystal structure of the human MLKL kinase-like domain
Descriptor: Mixed lineage kinase domain-like protein
Authors:Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
Deposit date:2013-08-09
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
3UDB
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BU of 3udb by Molmil
Crystal structure of SnRK2.6
Descriptor: CHLORIDE ION, Serine/threonine-protein kinase SRK2E
Authors:Xie, T, Ren, R, Pang, Y, Yan, C.
Deposit date:2011-10-27
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.567 Å)
Cite:Molecular mechanism for the inhibition of a critical component in the Arabidopsis thaliana abscisic acid signal transduction pathways, SnRK2.6, by the protein phosphatase ABI1
to be published
2LD7
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BU of 2ld7 by Molmil
Solution structure of the mSin3A PAH3-SAP30 SID complex
Descriptor: Histone deacetylase complex subunit SAP30, Paired amphipathic helix protein Sin3a
Authors:Xie, T, He, Y, Korkeamaki, H, Zhang, Y, Imhoff, R, Lohi, O, Radhakrishnan, I.
Deposit date:2011-05-16
Release date:2011-06-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the 30-kDa Sin3-associated protein (SAP30) in complex with the mammalian Sin3A corepressor and its role in nucleic acid binding.
J.Biol.Chem., 286, 2011
2M00
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BU of 2m00 by Molmil
Solution structure of staphylococcal nuclease E43S mutant in the presence of ssDNA and Cd2+
Descriptor: Thermonuclease
Authors:Xie, T, Feng, Y, Shan, L, Wang, J.
Deposit date:2012-10-14
Release date:2013-03-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Modeling of the [E43S]SNase-ssDNA-Cd(2+) complex: Structural insight into the action of nuclease on ssDNA.
Arch.Biochem.Biophys., 532, 2013
4M68
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BU of 4m68 by Molmil
Crystal structure of the mouse MLKL kinase-like domain
Descriptor: GLYCEROL, Mixed lineage kinase domain-like protein
Authors:Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
Deposit date:2013-08-09
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4M66
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BU of 4m66 by Molmil
Crystal structure of the mouse RIP3 kinase domain
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
Deposit date:2013-08-09
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4M69
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BU of 4m69 by Molmil
Crystal structure of the mouse RIP3-MLKL complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mixed lineage kinase domain-like protein, ...
Authors:Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
Deposit date:2013-08-09
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4Q89
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BU of 4q89 by Molmil
Crystal Structure of the CotA native enzyme
Descriptor: CHLORIDE ION, COPPER (II) ION, Spore coat protein A
Authors:Xie, T, Liu, Z.C, Wang, G.G.
Deposit date:2014-04-26
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The crystal structure of CotA laccase complexed with sinapic acid
To be Published
7W02
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BU of 7w02 by Molmil
Cryo-EM structure of ATP-bound ABCA3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xie, T, Zhang, Z.K, Yue, J, Gong, X.
Deposit date:2021-11-17
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the human surfactant lipid transporter ABCA3.
Sci Adv, 8, 2022
7W01
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BU of 7w01 by Molmil
Cryo-EM structure of nucleotide-free ABCA3
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xie, T, Zhang, Z.K, Yue, J, Gong, X.
Deposit date:2021-11-17
Release date:2022-04-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the human surfactant lipid transporter ABCA3.
Sci Adv, 8, 2022

 

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