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PDB: 13 results

3RH8
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BU of 3rh8 by Molmil
Crystal Structure of the Light-state Dimer of Fungal Blue-Light Photoreceptor Vivid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD
Authors:Vaidya, A.T, Crane, B.R.
Deposit date:2011-04-11
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of a Light-Activated LOV Protein Dimer That Regulates Transcription.
Sci.Signal., 4, 2011
5W2F
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BU of 5w2f by Molmil
Crystal Structure of the C-terminal Domain of Human eIF2D at 1.4 A resolution
Descriptor: Eukaryotic translation initiation factor 2D, FORMIC ACID
Authors:Vaidya, A.T, Lomakin, I.B, Joseph, N.N, Dmitriev, S.E, Steitz, T.A.
Deposit date:2017-06-06
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of the C-terminal Domain of Human eIF2D and Its Implications on Eukaryotic Translation Initiation.
J. Mol. Biol., 429, 2017
6NWC
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BU of 6nwc by Molmil
PYL10 bound to the ABA pan-agonist 3CB
Descriptor: 1-{[(4-cyano-3-cyclopropylphenyl)acetyl]amino}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2019-02-06
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Dynamic control of plant water use using designed ABA receptor agonists.
Science, 366, 2019
4GU5
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BU of 4gu5 by Molmil
Structure of Full-length Drosophila Cryptochrome
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
Authors:Zoltowski, B.D, Vaidya, A.T, Top, D, Widom, J, Young, M.W, Levy, C, Jones, A.R, Scrutton, N.S, Leys, D, Crane, B.R.
Deposit date:2012-08-29
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Updated structure of Drosophila cryptochrome.
Nature, 495, 2013
7LJY
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BU of 7ljy by Molmil
Cryo-EM structure of the B dENE construct complexed with a 28-mer poly(A)
Descriptor: B dENE construct, poly(A)
Authors:Torabi, S, Chen, Y, Zhang, K, Wang, J, DeGregorio, S, Vaidya, A, Su, Z, Pabit, S, Chiu, W, Pollack, L, Steitz, J.
Deposit date:2021-02-01
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural analyses of an RNA stability element interacting with poly(A).
Proc.Natl.Acad.Sci.USA, 118, 2021
6NWB
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PYL10 bound to the selective agonist hexabactin
Descriptor: Abscisic acid receptor PYL10, N-{[(4-cyanophenyl)methyl]sulfonyl}-1-(thiophen-3-yl)cyclohexane-1-carboxamide
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2019-02-06
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:PYL10 bound to the selective agonist hexabactin
To Be Published
7MLC
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BU of 7mlc by Molmil
PYL10 bound to the ABA pan-antagonist 4a
Descriptor: 1-{2-[3,5-dicyclopropyl-4-(4-{[(quinoxaline-2-carbonyl)amino]methyl}-1H-1,2,3-triazol-1-yl)phenyl]acetamido}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10, GLYCEROL
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MLD
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BU of 7mld by Molmil
PYL10 bound to the ABA pan-antagonist antabactin
Descriptor: Abscisic acid receptor PYL10, CITRIC ACID, antabactin
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
3TGH
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BU of 3tgh by Molmil
GAP50 the anchor in the inner membrane complex of Plasmodium
Descriptor: COBALT (II) ION, DIMETHYL SULFOXIDE, Glideosome-associated protein 50, ...
Authors:Bosch, J, Paige, M.H, Vaidya, A, Bergman, L, Hol, W.G.J.
Deposit date:2011-08-17
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of GAP50, the anchor of the invasion machinery in the inner membrane complex of Plasmodium falciparum.
J.Struct.Biol., 178, 2012
7JNH
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BU of 7jnh by Molmil
Crystal structure of a double-ENE RNA stability element in complex with a 28-mer poly(A) RNA
Descriptor: 28-mer poly(A) RNA, COBALT HEXAMMINE(III), Core double ENE RNA (Xtal construct) from Oryza sativa transposon,Core double ENE RNA (Xtal construct) from Oryza sativa transposon, ...
Authors:Torabi, S.F, Vaidya, A.T, Tycowski, K.T, DeGregorio, S.J, Wang, J, Shu, M.D, Steitz, T.A, Steitz, J.A.
Deposit date:2020-08-04
Release date:2021-01-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:RNA stabilization by a poly(A) tail 3'-end binding pocket and other modes of poly(A)-RNA interaction.
Science, 371, 2021
5UR5
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BU of 5ur5 by Molmil
PYR1 bound to the rationally designed agonist 4m
Descriptor: Abscisic acid receptor PYR1, GLYCEROL, N-(4-cyano-3-ethyl-5-methylphenyl)-1-(4-methylphenyl)methanesulfonamide, ...
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2017-02-09
Release date:2017-11-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration.
ACS Chem. Biol., 12, 2017
5UR6
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BU of 5ur6 by Molmil
PYR1 bound to the rationally designed agonist cyanabactin
Descriptor: Abscisic acid receptor PYR1, N-(4-cyano-3-cyclopropylphenyl)-1-(4-methylphenyl)methanesulfonamide, SULFATE ION
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2017-02-09
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration.
ACS Chem. Biol., 12, 2017
5VYC
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BU of 5vyc by Molmil
Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Lomakin, I.B, Stolboushkina, E.A, Vaidya, A.T, Garber, M.B, Dmitriev, S.E, Steitz, T.A.
Deposit date:2017-05-24
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (6 Å)
Cite:Crystal Structure of the Human Ribosome in Complex with DENR-MCT-1.
Cell Rep, 20, 2017

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