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PDB: 75 results

6FAB
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BU of 6fab by Molmil
THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P-AZOPHENYLARSONATE FAB 36-71. 1. X-RAY CRYSTALLOGRAPHY, SITE-DIRECTED MUTAGENESIS, AND MODELING OF THE COMPLEX WITH HAPTEN
Descriptor: IGG1-KAPPA 36-71 FAB (HEAVY CHAIN), IGG1-KAPPA 36-71 FAB (LIGHT CHAIN)
Authors:Strong, R.K, Rose, D.R, Petsko, G.A, Sharon, J, Margolies, M.N.
Deposit date:1991-01-17
Release date:1993-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structure of murine anti-p-azophenylarsonate Fab 36-71. 1. X-ray crystallography, site-directed mutagenesis, and modeling of the complex with hapten.
Biochemistry, 30, 1991
3CII
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BU of 3cii by Molmil
Structure of NKG2A/CD94 bound to HLA-E
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen peptide, HLA class I histocompatibility antigen, ...
Authors:Strong, R.K, Kaiser, B.K, Pizarro, J.C.
Deposit date:2008-03-11
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.41 Å)
Cite:Structural basis for NKG2A/CD94 recognition of HLA-E.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1DFV
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BU of 1dfv by Molmil
CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL GELATINASE ASSOCIATED LIPOCALIN MONOMER
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HUMAN NEUTROPHIL GELATINASE, ...
Authors:Goetz, D.H, Willie, S.T, Armen, R.S, Bratt, T, Borregaard, N, Strong, R.K.
Deposit date:1999-11-22
Release date:2000-03-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ligand preference inferred from the structure of neutrophil gelatinase associated lipocalin
Biochemistry, 39, 2000
8CXC
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BU of 8cxc by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
Descriptor: 3F2 Antibody heavy chain, 3F2 Antibody light chain, Mesothelin, ...
Authors:Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
Deposit date:2022-05-20
Release date:2023-06-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (4.31 Å)
Cite:Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
8CZ8
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BU of 8cz8 by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
Descriptor: Mesothelin, cleaved form, SULFATE ION, ...
Authors:Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
Deposit date:2022-05-24
Release date:2023-06-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
8CYH
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BU of 8cyh by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, A12 antibody heavy chain, A12 antibody light chain, ...
Authors:Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
Deposit date:2022-05-23
Release date:2023-06-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023
7SNC
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BU of 7snc by Molmil
Pacifastin related protease inhibitors
Descriptor: Protease inhibitor
Authors:Gewe, M.M, Strong, R.K.
Deposit date:2021-10-27
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
7SND
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BU of 7snd by Molmil
Pacifastin related protease inhibitors
Descriptor: GLYCEROL, PHOSPHATE ION, Pacifastin-related peptide
Authors:Gewe, M.M, Strong, R.K.
Deposit date:2021-10-27
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
6OKD
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BU of 6okd by Molmil
Crystal Structure of human transferrin receptor in complex with a cystine-dense peptide
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Finton, K.A.K, Rupert, P.B, Strong, R.K.
Deposit date:2019-04-12
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A TfR-Binding Cystine-Dense Peptide Promotes Blood-Brain Barrier Penetration of Bioactive Molecules.
J.Mol.Biol., 432, 2020
6OKE
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BU of 6oke by Molmil
Crystal structure of an apo Transferrin-Receptor-Binding cystine-dense peptide
Descriptor: Transferrin-Receptor Binding Peptide
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2019-04-12
Release date:2020-04-15
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A TfR-Binding Cystine-Dense Peptide Promotes Blood-Brain Barrier Penetration of Bioactive Molecules.
J.Mol.Biol., 432, 2020
3OMZ
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BU of 3omz by Molmil
Crystal structure of MICA-specific human gamma delta T cell receptor
Descriptor: human Vdelta1 gamma delta T cell receptor delta1A/B-3
Authors:Xu, B, Holmes, M.A, Strong, R.K.
Deposit date:2010-08-27
Release date:2011-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Crystal structure of a {gamma}{delta} T-cell receptor specific for the human MHC class I homolog MICA.
Proc.Natl.Acad.Sci.USA, 108, 2011
1HYR
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BU of 1hyr by Molmil
CRYSTAL STRUCTURE OF HUMAN MICA IN COMPLEX WITH NATURAL KILLER CELL RECEPTOR NKG2D
Descriptor: MHC CLASS I CHAIN-RELATED PROTEIN A, NKG2-D TYPE II INTEGRAL MEMBRANE PROTEIN
Authors:Li, P, Strong, R.K.
Deposit date:2001-01-21
Release date:2001-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Complex structure of the activating immunoreceptor NKG2D and its MHC class I-like ligand MICA.
Nat.Immunol., 2, 2001
7U63
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BU of 7u63 by Molmil
Crystal Structure Anti-Oxycodone Antibody HY2-A12 Fab Complexed with Oxycodone
Descriptor: 14-hydroxy-3-methoxy-17-methyl-5beta-4,5-epoxymorphinan-6-one, HY2-A12 Fab Heavy Chain, HY2-A12 Fab Light Chain
Authors:Rodarte, J.V, Pancera, M.P, Weidle, C, Rupert, P.B, Strong, R.K.
Deposit date:2022-03-03
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of drug-specific monoclonal antibodies bound to opioids and nicotine reveal a common mode of binding.
Structure, 31, 2023
5JR8
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BU of 5jr8 by Molmil
Disposal of Iron by a Mutant form of Siderocalin NGAL
Descriptor: GLYCEROL, Neutrophil gelatinase-associated lipocalin, PHOSPHATE ION
Authors:Rupert, P.B, Strong, R.K, Barasch, J, Hollman, M, Deng, R, Hod, E.A, Abergel, R, Allred, B, Xu, K, Darrah, S, Tekabe, Y, Perlstein, A, Bruck, E, Stauber, J, Corbin, K, Buchen, C, Slavkovich, V, Graziano, J, Spitalnik, S, Qiu, A.
Deposit date:2016-05-05
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Disposal of iron by a mutant form of lipocalin 2.
Nat Commun, 7, 2016
5KIC
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BU of 5kic by Molmil
Long-sought stabilization of berkelium(IV) in solution: An anomaly within the heavy actinide series
Descriptor: CALIFORNIUM ION, CHLORIDE ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2016-06-16
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Chelation and stabilization of berkelium in oxidation state +IV.
Nat Chem, 9, 2017
5KID
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BU of 5kid by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Descriptor: CHLORIDE ION, GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), ...
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2016-06-16
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
5KHP
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BU of 5khp by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Descriptor: GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), Neutrophil gelatinase-associated lipocalin, ...
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2016-06-15
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
6O5D
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BU of 6o5d by Molmil
PYOCHELIN
Descriptor: GLYCEROL, Neutrophil gelatinase-associated lipocalin, SULFATE ION
Authors:Rupert, P.B, Strong, R.K, Clifton, M.C, Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-03-01
Release date:2019-09-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Parsing the functional specificity of Siderocalin/Lipocalin 2/NGAL for siderophores and related small-molecule ligands.
J Struct Biol X, 2, 2019
7SGQ
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BU of 7sgq by Molmil
Protease inhibitors variant, CTI-homolog pacifastin
Descriptor: Protease inhibitor LCMI-II, SULFATE ION
Authors:Gewe, M.M, Strong, R.K.
Deposit date:2021-10-07
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
7SLT
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BU of 7slt by Molmil
Protease inhibitors variant, CTI-homolog pacifastin
Descriptor: GLYCEROL, Protease inhibitor LCMI-II
Authors:Gewe, M.M, Strong, R.K.
Deposit date:2021-10-24
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
7SOH
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BU of 7soh by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Chlorotoxin
Authors:Gewe, M.M, Strong, R.K.
Deposit date:2021-10-30
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Screening, large-scale production and structure-based classification of cystine-dense peptides.
Nat Struct Mol Biol, 25, 2018
3T43
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BU of 3t43 by Molmil
Crystal Structure of HIV Epitope-Scaffold 4E10_1XIZA_S0_006_C
Descriptor: HIV Epitope-Scaffold 4E10_1XIZA_S0_006_C
Authors:Holmes, M.A, Strong, R.K.
Deposit date:2011-07-25
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution structure prediction of a circular permutation loop.
Protein Sci., 20, 2011
3U9P
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BU of 3u9p by Molmil
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
Descriptor: Monoclonal Fab Fragment Heavy Chain, Monoclonal Fab Fragment Light Chain, Neutrophil gelatinase-associated lipocalin
Authors:Correnti, C, Strong, R.K.
Deposit date:2011-10-19
Release date:2013-05-01
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
Plos One, 7, 2012
1L6M
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BU of 1l6m by Molmil
Neutrophil Gelatinase-associated Lipocalin is a Novel Bacteriostatic Agent that Interferes with Siderophore-mediated Iron Acquisition
Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, FE (III) ION, ...
Authors:Goetz, D.H, Borregaard, N, Bluhm, M.E, Raymond, K.N, Strong, R.K.
Deposit date:2002-03-11
Release date:2003-03-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Neutrophil Lipocalin NGAL is a Bacteriostatic Agent that Interferes with Siderophore-mediated Iron Acquisition
Mol.Cell, 10, 2002
4LLV
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BU of 4llv by Molmil
The structure of the unbound form of anti-HIV antibody 4E10 Fv
Descriptor: 4E10 Fv heavy chain, 4E10 Fv light chain, GLYCEROL, ...
Authors:Finton, K.A.K, Rupert, P.B, Strong, R.K.
Deposit date:2013-07-09
Release date:2013-10-16
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Autoreactivity and Exceptional CDR Plasticity (but Not Unusual Polyspecificity) Hinder Elicitation of the Anti-HIV Antibody 4E10.
Plos Pathog., 9, 2013

 

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