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PDB: 36 results

1BUP
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T13S MUTANT OF BOVINE 70 KILODALTON HEAT SHOCK PROTEIN
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Sousa, M.C, Mckay, D.B.
Deposit date:1998-09-03
Release date:1998-09-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The hydroxyl of threonine 13 of the bovine 70-kDa heat shock cognate protein is essential for transducing the ATP-induced conformational change.
Biochemistry, 37, 1998
8FTN
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E. coli ArnA dehydrogenase domain mutant - N492A
Descriptor: Bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, SULFATE ION
Authors:Sousa, M.C, Mitchell, M.E.
Deposit date:2023-01-12
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Targeting the Conformational Change in ArnA Dehydrogenase for Selective Inhibition of Polymyxin Resistance.
Biochemistry, 62, 2023
8GJH
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Salmonella ArnA
Descriptor: Bifunctional polymyxin resistance protein ArnA, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Sousa, M.C, Mitchell, M.E, Gatzeva-Topalova, P.Z.
Deposit date:2023-03-15
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Targeting the Conformational Change in ArnA Dehydrogenase for Selective Inhibition of Polymyxin Resistance.
Biochemistry, 62, 2023
8T0J
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Salmonella Typhimurium ArnD
Descriptor: Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD
Authors:Sousa, M.C, Munoz-Escudero, D, Lee, M.
Deposit date:2023-06-01
Release date:2023-10-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure and Function of ArnD. A Deformylase Essential for Lipid A Modification with 4-Amino-4-deoxy-l-arabinose and Polymyxin Resistance.
Biochemistry, 62, 2023
1KYI
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HslUV (H. influenzae)-NLVS Vinyl Sulfone Inhibitor Complex
Descriptor: 4-IODO-3-NITROPHENYL ACETYL-LEUCINYL-LEUCINYL-LEUCINYL-VINYLSULFONE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent hsl protease ATP-binding subunit hslU, ...
Authors:Sousa, M.C, Kessler, B.M, Overkleeft, H.S, McKay, D.B.
Deposit date:2002-02-04
Release date:2002-05-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of HslUV Complexed with a Vinyl Sulfone Inhibitor: Corroboration of a Proposed Mechanism of Allosteric Activation of HslV by HslU
J.Mol.Biol., 318, 2002
4LDR
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Structure of the S283Y mutant of MRDI
Descriptor: Methylthioribose-1-phosphate isomerase
Authors:Sousa, M.C, Templeton, P.D, Metzner, S.I.
Deposit date:2013-06-25
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Structure of Mediator of RhoA-Dependent Invasion (MRDI) Explains Its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion.
Biochemistry, 52, 2013
4LDQ
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Crystal Structure of the Mediator of Rho Dependent Invasion
Descriptor: Methylthioribose-1-phosphate isomerase
Authors:Sousa, M.C, Templeton, P.D, Metzner, S.I.
Deposit date:2013-06-24
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Structure of Mediator of RhoA-Dependent Invasion (MRDI) Explains Its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion.
Biochemistry, 52, 2013
2BUP
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T13G Mutant of the ATPASE fragment of Bovine HSC70
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
Authors:Sousa, M.C, Mckay, D.B.
Deposit date:1998-09-08
Release date:1998-09-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The hydroxyl of threonine 13 of the bovine 70-kDa heat shock cognate protein is essential for transducing the ATP-induced conformational change.
Biochemistry, 37, 1998
4OCA
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Cryatal structure of ArnB K188A complexted with PLP and UDP-Ara4N
Descriptor: (2R,3R,4S,5S)-3,4-dihydroxy-5-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]tetrahydro-2H-pyr an-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
Authors:Sousa, M.C, Lee, M.
Deposit date:2014-01-08
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Substrate Specificity in ArnB. A Key Enzyme in the Polymyxin Resistance Pathway of Gram-Negative Bacteria.
Biochemistry, 53, 2014
1JJW
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Structure of Haemophilus influenzae HslV Protein at 1.9 A Resolution
Descriptor: ATP-DEPENDENT PROTEASE HSLV, POTASSIUM ION
Authors:Sousa, M.C, McKay, D.B.
Deposit date:2001-07-09
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site.
Acta Crystallogr.,Sect.D, 57, 2001
1JMV
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Structure of Haemophylus influenzae Universal Stress Protein At 1.85A Resolution
Descriptor: SULFATE ION, Universal Stress Protein A
Authors:Sousa, M.C, McKay, D.B.
Deposit date:2001-07-20
Release date:2001-12-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the universal stress protein of Haemophilus influenzae.
Structure, 9, 2001
4Q3J
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Crystal structure of NFkB-p65-degrading zinc protease family protein
Descriptor: MAGNESIUM ION, NFkB-p65-degrading zinc protease family protein, ZINC ION
Authors:Sousa, M.C, Turco, M.M.
Deposit date:2014-04-11
Release date:2014-07-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:The Structure and Specificity of the Type III Secretion System Effector NleC Suggest a DNA Mimicry Mechanism of Substrate Recognition.
Biochemistry, 53, 2014
1G3K
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CRYSTAL STRUCTURE OF THE H. INFLUENZAE PROTEASE HSLV AT 1.9 A RESOLUTION
Descriptor: ATP-DEPENDENT PROTEASE HSLV, SODIUM ION
Authors:Sousa, M.C, McKay, D.B.
Deposit date:2000-10-24
Release date:2000-11-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal and solution structures of an HslUV protease-chaperone complex.
Cell(Cambridge,Mass.), 103, 2000
1G3I
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CRYSTAL STRUCTURE OF THE HSLUV PROTEASE-CHAPERONE COMPLEX
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-DEPENDENT HSLU PROTEASE ATP-BINDING SUBUNIT HSLU, ATP-DEPENDENT PROTEASE HSLV
Authors:Sousa, M.C, Trame, C.B, Tsuruta, H, Wilbanks, S.M, Reddy, V.S, McKay, D.B.
Deposit date:2000-10-24
Release date:2000-11-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Crystal and solution structures of an HslUV protease-chaperone complex.
Cell(Cambridge,Mass.), 103, 2000
1U2M
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Crystal Structure of Skp
Descriptor: Histone-like protein HLP-1
Authors:Walton, T.A, Sousa, M.C.
Deposit date:2004-07-19
Release date:2004-08-24
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Skp, a Prefoldin-like Chaperone that Protects Soluble and Membrane Proteins from Aggregation
Mol.Cell, 15, 2004
1U9J
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Crystal Structure of E. coli ArnA (PmrI) Decarboxylase Domain
Descriptor: Hypothetical protein yfbG, SULFATE ION
Authors:Gatzeva-Topalova, P.Z, May, A.P, Sousa, M.C.
Deposit date:2004-08-09
Release date:2004-10-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Escherichia coli ArnA (PmrI) Decarboxylase Domain. A Key Enzyme for Lipid A Modification with 4-Amino-4-deoxy-l-arabinose and Polymyxin Resistance
Biochemistry, 43, 2004
4PK1
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Structure of BamB fused to a BamA POTRA domain fragment
Descriptor: Chimera protein of Outer membrane protein assembly factors BamA and BamB
Authors:Jansen, K.B, Sousa, M.C.
Deposit date:2014-05-13
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of BamB Bound to a Periplasmic Domain Fragment of BamA, the Central Component of the beta-Barrel Assembly Machine.
J.Biol.Chem., 290, 2015
3EFC
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BU of 3efc by Molmil
Crystal Structure of YaeT periplasmic domain
Descriptor: Outer membrane protein assembly factor yaeT
Authors:Gatzeva-Topalova, P.Z, Walton, T.A, Sousa, M.C.
Deposit date:2008-09-08
Release date:2008-12-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of YaeT: conformational flexibility and substrate recognition.
Structure, 16, 2008
5CT9
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BU of 5ct9 by Molmil
G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 5% [BMIM][Cl]
Descriptor: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CTA
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BU of 5cta by Molmil
G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 10% [BMIM][Cl]
Descriptor: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5EFR
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BU of 5efr by Molmil
Crystal Structure of a BamA-BamD fusion
Descriptor: BamA-BamD fusion Protein
Authors:Bergal, H.T, Hopkins, A.H, Metzner, S.I, Sousa, M.C.
Deposit date:2015-10-24
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of a BamA-BamD Fusion Illuminates the Architecture of the beta-Barrel Assembly Machine Core.
Structure, 24, 2016
5CRI
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BU of 5cri by Molmil
Wild-type Bacillus subtilis lipase A with 0% [BMIM][Cl]
Descriptor: Esterase, SULFATE ION
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-22
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CT6
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Wild-type Bacillus subtilis lipase A with 20% [BMIM][Cl]
Descriptor: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Lipase EstA
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CT8
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G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 0% [BMIM][Cl]
Descriptor: Quadruple mutant lipase A, SULFATE ION
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CT4
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Wild-type Bacillus subtilis lipase A with 5% [BMIM][Cl]
Descriptor: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase, ...
Authors:Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015

 

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