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PDB: 829 results

2CXF
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RUN domain of Rap2 interacting protein x, crystallized in C2 space group
Descriptor: rap2 interacting protein x
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-29
Release date:2005-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
2CYA
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Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix
Descriptor: SULFATE ION, Tyrosyl-tRNA synthetase
Authors:Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Kuroishi, C, Kuramitsu, S, Terada, T, Bessho, Y, Shirouzu, M, Sekine, S.I, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-06
Release date:2005-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2005
2DNP
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BU of 2dnp by Molmil
Solution structure of RNA binding domain 2 in RNA-binding protein 14
Descriptor: RNA-binding protein 14
Authors:Kusuhara, M, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain 2 in RNA-binding protein 14
To be Published
2DWG
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RUN domain of Rap2 interacting protein x, crystallized in P2(1)2(1)2(1) space group
Descriptor: Protein RUFY3
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-11
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
2E5S
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BU of 2e5s by Molmil
Solution structure of the zf-CCCHx2 domain of muscleblind-like 2, isoform 1 [Homo sapiens]
Descriptor: OTTHUMP00000018578, ZINC ION
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
2E8A
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Crystal structure of the human Hsp70 ATPase domain in complex with AMP-PNP
Descriptor: Heat shock 70kDa protein 1A, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Shida, M, Ishii, R, Takagi, T, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Direct inter-subdomain interactions switch between the closed and open forms of the Hsp70 nucleotide-binding domain in the nucleotide-free state.
Acta Crystallogr.,Sect.D, 66, 2010
2CZL
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Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8 (Cys11 modified with beta-mercaptoethanol)
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, L(+)-TARTARIC ACID, POTASSIUM ION, ...
Authors:Arai, R, Nishino, A, Nagano, K, Kamo-Uchikubo, T, Nishimoto, M, Toyama, M, Terada, T, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-13
Release date:2006-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
2CXL
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RUN domain of Rap2 interacting protein x, crystallized in I422 space group
Descriptor: rap2 interacting protein x
Authors:Kukimoto-Niino, M, Umehara, T, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-30
Release date:2005-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
2E88
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Crystal structure of the human Hsp70 ATPase domain in the apo form
Descriptor: Heat shock 70kDa protein 1A, ZINC ION
Authors:Shida, M, Ishii, R, Takagi, T, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct inter-subdomain interactions switch between the closed and open forms of the Hsp70 nucleotide-binding domain in the nucleotide-free state.
Acta Crystallogr.,Sect.D, 66, 2010
2EF1
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Crystal structure of the extracellular domain of human CD38
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADP-ribosyl cyclase 1
Authors:Kukimoto-Niino, M, Nureki, O, Murayama, K, Shirouzu, M, Katada, T, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-20
Release date:2007-02-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the extracellular domain of human CD38
To be Published
2EPY
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Solution structure of the 10th C2H2 type zinc finger domain of Zinc finger protein 268
Descriptor: ZINC ION, Zinc finger protein 268
Authors:Imai, M, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 10th C2H2 type zinc finger domain of Zinc finger protein 268
To be Published
2EQW
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Solution structure of the 6th C2H2 type zinc finger domain of Zinc finger protein 484
Descriptor: ZINC ION, Zinc finger protein 484
Authors:Imai, M, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 6th C2H2 type zinc finger domain of Zinc finger protein 484
To be Published
2DWK
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Crystal structure of the RUN domain of mouse Rap2 interacting protein x
Descriptor: Protein RUFY3
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-15
Release date:2006-08-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the RUN Domain of the RAP2-interacting Protein x
J.Biol.Chem., 281, 2006
2CYB
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Crystal structure of Tyrosyl-tRNA Synthetase complexed with L-tyrosine from Archaeoglobus fulgidus
Descriptor: TYROSINE, Tyrosyl-tRNA synthetase
Authors:Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-06
Release date:2005-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2006
2DK4
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BU of 2dk4 by Molmil
Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)
Descriptor: Pre-mRNA-splicing factor 18
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-06
Release date:2006-10-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the splicing factor motif of the human Prp18 protein.
Proteins, 80, 2012
2E87
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Crystal structure of hypothetical GTP-binding protein PH1320 from Pyrococcus horikoshii OT3, in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Hypothetical protein PH1320, SULFATE ION
Authors:Kukimoto-Niino, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2007-07-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of hypothetical GTP-binding protein PH1320 from Pyrococcus horikoshii OT3, in complex with GDP
To be Published
2EQX
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Solution structure of the BACK domain of Kelch repeat and BTB domain-containing protein 4
Descriptor: Kelch repeat and BTB domain-containing protein 4
Authors:Imai, M, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the BACK domain of Kelch repeat and BTB domain-containing protein 4
To be Published
2E0A
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BU of 2e0a by Molmil
Crystal structure of human pyruvate dehydrogenase kinase 4 in complex with AMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Pyruvate dehydrogenase kinase isozyme 4
Authors:Kukimoto-Niino, M, Tokmakov, A, Terada, T, Shiromizu, I, Kawamoto, M, Matsusue, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-03
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4.
Acta Crystallogr.,Sect.D, 67, 2011
2EFL
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Crystal structure of the EFC domain of formin-binding protein 17
Descriptor: Formin-binding protein 1
Authors:Shimada, A, Niwa, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2007-05-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007
2EFK
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Crystal structure of the EFC domain of Cdc42-interacting protein 4
Descriptor: Cdc42-interacting protein 4
Authors:Shimada, A, Niwa, H, Chen, L, Liu, Z.-J, Wang, B.-C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007
2CY1
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Crystal structure of APE1850
Descriptor: NusA protein homolog
Authors:Shibata, R, Bessho, Y, Umehara, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallization of the archaeal transcription termination factor NusA: a significant decrease in twinning under microgravity conditions
Acta Crystallogr.,Sect.F, 63, 2007
2CQL
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Solution structure of the N-terminal domain of human ribosomal protein L9
Descriptor: 60S ribosomal protein L9
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain of human ribosomal protein L9
To be Published
2CQO
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Solution structure of the S1 RNA binding domain of human hypothetical protein FLJ11067
Descriptor: Nucleolar protein of 40 kDa
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the S1 RNA binding domain of human hypothetical protein FLJ11067
To be Published
2CQP
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Solution structure of the RNA binding domain of RNA-binding protein 12
Descriptor: RNA-binding protein 12
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain of RNA-binding protein 12
To be Published
2CQN
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Solution structure of the FF domain of human Formin-binding protein 3
Descriptor: Formin-binding protein 3
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the FF domain of human Formin-binding protein 3
To be Published

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