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PDB: 100 results

3US6
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Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt1 from Medicago truncatula
Descriptor: Histidine-containing Phosphotransfer Protein type 1, MtHPt1
Authors:Ruszkowski, M, Brzezinski, K, Jedrzejczak, R, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2011-11-23
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.446 Å)
Cite:Medicago truncatula histidine-containing phosphotransfer protein: Structural and biochemical insights into the cytokinin transduction pathway in plants.
Febs J., 280, 2013
4PSB
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Crystal Structure of Phytohormone Binding Protein from Vigna radiata in complex with gibberellic acid (GA3)
Descriptor: Cytokinin-specific binding protein, GIBBERELLIN A3
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2014-03-07
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Specific binding of gibberellic acid by Cytokinin-Specific Binding Proteins: a new aspect of plant hormone-binding proteins with the PR-10 fold.
Acta Crystallogr.,Sect.D, 70, 2014
6MT1
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Crystal structure of Inorganic Pyrophosphatase from Medicago truncatula (R3 crystal form)
Descriptor: Soluble inorganic pyrophosphatase
Authors:Ruszkowski, M, Grzechowiak, M, Dauter, Z.
Deposit date:2018-10-18
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structures of plant inorganic pyrophosphatase, an enzyme with a moonlighting autoproteolytic activity.
Biochem.J., 476, 2019
6MT2
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Crystal structure of Inorganic Pyrophosphatase from Medicago truncatula (I23 crystal form)
Descriptor: Soluble inorganic pyrophosphatase
Authors:Ruszkowski, M, Grzechowiak, M, Dauter, Z.
Deposit date:2018-10-18
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal structures of plant inorganic pyrophosphatase, an enzyme with a moonlighting autoproteolytic activity.
Biochem.J., 476, 2019
4JHG
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BU of 4jhg by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, MALONATE ION, MtN13 protein, ...
Authors:Ruszkowski, M, Tusnio, K, Ciesielska, A, Brzezinski, K, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4GY9
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Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-isopentenyladenine (2iP)
Descriptor: MALONATE ION, MtN13 protein, N-(3-METHYLBUT-2-EN-1-YL)-9H-PURIN-6-AMINE, ...
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2012-09-05
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4JHI
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Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-benzyladenine
Descriptor: MtN13 protein, N-BENZYL-9H-PURIN-6-AMINE, SODIUM ION
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4JHH
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Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with kinetin
Descriptor: MALONATE ION, MtN13 protein, N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE, ...
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4G78
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Subatomic Resolution Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt2 from Medicago truncatula
Descriptor: Histidine phosphotransfer protein
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2012-07-20
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Subatomic Resolution Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt2 from Medicago truncatula
To be Published
7QX8
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Crystal structure of serine hydroxymethyltransferase, isoform 7 from Arabidopsis thaliana (SHM7)
Descriptor: Serine hydroxymethyltransferase 7
Authors:Ruszkowski, M, Grzechowiak, M, Sekula, B.
Deposit date:2022-01-26
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Arabidopsis thaliana serine hydroxymethyltransferases: functions, structures, and perspectives.
Plant Physiol Biochem., 187, 2022
7QPE
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Crystal structure of serine hydroxymethyltransferase, isoform 6 from Arabidopsis thaliana (SHM6)
Descriptor: NITRATE ION, Serine hydroxymethyltransferase 6
Authors:Ruszkowski, M, Grzechowiak, M, Sekula, B.
Deposit date:2022-01-04
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Arabidopsis thaliana serine hydroxymethyltransferases: functions, structures, and perspectives.
Plant Physiol Biochem., 187, 2022
7Q00
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Crystal structure of serine hydroxymethyltransferase, isoform 4 from Arabidopsis thaliana (SHM4)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Serine hydroxymethyltransferase 4
Authors:Ruszkowski, M, Sekula, B.
Deposit date:2021-10-13
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Arabidopsis thaliana serine hydroxymethyltransferases: functions, structures, and perspectives.
Plant Physiol Biochem., 187, 2022
7PZZ
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Crystal structure of serine hydroxymethyltransferase, isoform 2 from Arabidopsis thaliana (SHM2)
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Ruszkowski, M, Sekula, B.
Deposit date:2021-10-13
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Arabidopsis thaliana serine hydroxymethyltransferases: functions, structures, and perspectives.
Plant Physiol Biochem., 187, 2022
5VLC
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BU of 5vlc by Molmil
Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with L-Histidinol
Descriptor: Histidinol dehydrogenase, chloroplastic, L-histidinol, ...
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2017-04-25
Release date:2017-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of Medicago truncatula L-Histidinol Dehydrogenase Show Rearrangements Required for NAD(+) Binding and the Cofactor Positioned to Accept a Hydride.
Sci Rep, 7, 2017
5VLD
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Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with L-Histidine and NAD+
Descriptor: DI(HYDROXYETHYL)ETHER, HISTIDINE, Histidinol dehydrogenase, ...
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2017-04-25
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structures of Medicago truncatula L-Histidinol Dehydrogenase Show Rearrangements Required for NAD(+) Binding and the Cofactor Positioned to Accept a Hydride.
Sci Rep, 7, 2017
5VLB
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BU of 5vlb by Molmil
Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with Imidazole
Descriptor: DI(HYDROXYETHYL)ETHER, Histidinol dehydrogenase, chloroplastic, ...
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2017-04-25
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of Medicago truncatula L-Histidinol Dehydrogenase Show Rearrangements Required for NAD(+) Binding and the Cofactor Positioned to Accept a Hydride.
Sci Rep, 7, 2017
6YEH
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Arabidopsis thaliana glutamate dehydrogenase isoform 1 in apo form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Glutamate dehydrogenase 1, POTASSIUM ION
Authors:Ruszkowski, M, Grzechowiak, M, Jaskolski, M.
Deposit date:2020-03-24
Release date:2020-05-20
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism.
Front Plant Sci, 11, 2020
6YEI
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Arabidopsis thaliana glutamate dehydrogenase isoform 1 in complex with NAD
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
Authors:Ruszkowski, M, Grzechowiak, M, Jaskolski, M.
Deposit date:2020-03-24
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism.
Front Plant Sci, 11, 2020
7OJ5
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BU of 7oj5 by Molmil
Cryo-EM structure of Medicago truncatula HISN5 protein
Descriptor: Imidazoleglycerol-phosphate dehydratase, MANGANESE (II) ION
Authors:Ruszkowski, M, Witek, W.
Deposit date:2021-05-13
Release date:2021-06-02
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cryo-EM and crystal structures of a herbicide development target, HISN5
To Be Published
6SMW
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A. thaliana serine hydroxymethyltransferase isoform 2 (AtSHMT2) in complex with pemetrexed
Descriptor: 1,2-ETHANEDIOL, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Ruszkowski, M, Sekula, B, Dauter, Z.
Deposit date:2019-08-23
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models.
Sci Rep, 9, 2019
6SMN
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A. thaliana serine hydroxymethyltransferase isoform 2 (AtSHMT2) in complex with methotrexate
Descriptor: 1,2-ETHANEDIOL, METHOTREXATE, SERINE, ...
Authors:Ruszkowski, M, Sekula, B, Dauter, Z.
Deposit date:2019-08-22
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models.
Sci Rep, 9, 2019
6SMR
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A. thaliana serine hydroxymethyltransferase isoform 4 (AtSHMT4) in complex with methotrexate
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, METHOTREXATE, ...
Authors:Ruszkowski, M, Sekula, B, Dauter, Z.
Deposit date:2019-08-22
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models.
Sci Rep, 9, 2019
7PE1
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Cryo-EM structure of BMV-derived VLP expressed in E. coli and assembled in the presence of tRNA (tVLP)
Descriptor: Coat protein
Authors:Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
Deposit date:2021-08-09
Release date:2022-03-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
7PE2
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Cryo-EM structure of BMV-derived VLP expressed in E. coli (eVLP)
Descriptor: Coat protein
Authors:Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
Deposit date:2021-08-09
Release date:2022-03-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
7PXY
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Crystal structure of Arabidopsis thaliana 5-enol-pyruvyl-shikimate-3-phosphate synthase (EPSPS) in open conformation
Descriptor: 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic, CHLORIDE ION, ...
Authors:Ruszkowski, M.
Deposit date:2021-10-08
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Deciphering the structure of Arabidopsis thaliana 5- enol -pyruvyl-shikimate-3-phosphate synthase: An essential step toward the discovery of novel inhibitors to supersede glyphosate.
Comput Struct Biotechnol J, 20, 2022

 

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