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PDB: 365 results

2LJA
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Solution Structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus
Descriptor: Putative thiol-disulfide oxidoreductase
Authors:Harris, R, Seidel, R.D, Hillerich, B, Gizzi, A, Kar, A, Lafleur, J, Chamala, S, Foti, R, Villegas, G, Evans, B, Zencheck, W, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-09-09
Release date:2011-10-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus
To be Published
2M4M
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Solution structure of the RRM domain of the hypothetical protein CAGL0M09691g from Candida glabrata
Descriptor: hypothetical protein
Authors:Harris, R, Hillerich, B, Ahmed, M, Bonanno, J.B, Chamala, S, Evans, B, Lafleur, J, Hammonds, J, Washington, E, Stead, M, Love, J, Attonito, J, Patel, H, Seidel, R.D, Chook, Y.M, Rout, M.P, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXstals)
Deposit date:2013-02-07
Release date:2013-02-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the RRM domain of the hypothetical protein CAGL0M09691g from Candida glabrata
To be Published
2M72
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Solution structure of uncharacterized thioredoxin-like protein PG_2175 from Porphyromonas gingivalis
Descriptor: Uncharacterized thioredoxin-like protein
Authors:Harris, R, Ahmed, M, Attonito, J, Bonanno, J.B, Chamala, S, Chowdhury, S, Evans, B, Fiser, A, Glenn, A.S, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Love, J.D, Seidel, R.D, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-16
Release date:2013-05-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of uncharacterized thioredoxin-like protein PG_2175 from Porphyromonas gingivalis
To be Published
2M71
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Solution structure of the a C-terminal domain of translation initiation factor IF-3 from Campylobacter jejuni
Descriptor: Translation initiation factor IF-3
Authors:Harris, R, Ahmed, M, Attonito, J, Bonanno, J.B, Chamala, S, Chowdhury, S, Evans, B, Fiser, A, Glenn, A.S, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Love, J.D, Seidel, R.D, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-16
Release date:2013-05-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the a C-terminal domain of translation initiation factor IF-3 from Campylobacter jejuni
To be Published
4RP4
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Crystal Structure of the L27 domain of Discs Large 1 (target ID NYSGRC-010766) from Drosophila melanogaster (space group P212121)
Descriptor: Disks large 1 tumor suppressor protein, FORMIC ACID
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-10-29
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module.
Biochemistry, 57, 2018
4RP3
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Crystal Structure of the L27 Domain of Discs Large 1 (target ID NYSGRC-010766) from Drosophila melanogaster bound to a potassium ion (space group P212121)
Descriptor: CHLORIDE ION, Disks large 1 tumor suppressor protein, FORMIC ACID, ...
Authors:Ghosh, A, Ramagopal, U, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-10-29
Release date:2014-11-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module.
Biochemistry, 57, 2018
4RP5
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Crystal Structure of the L27 domain of Discs Large 1 (target ID NYSGRC-010766) from Drosophila melanogaster (space group P21)
Descriptor: CHLORIDE ION, Disks large 1 tumor suppressor protein
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-10-29
Release date:2014-11-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module.
Biochemistry, 57, 2018
4MZY
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Crystal structure of enterococcus faecalis nicotinate phosphoribosyltransferase with malonate and phosphate bound
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Patskovsky, Y, Toro, R, Wasserman, S.R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-09-30
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Enterococcus Faecalis Nicotinate Phosphoribosyltransferase
To be Published
4N7T
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Crystal structure of phosphorylated phosphopentomutase from streptococcus mutans
Descriptor: AZIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Fedorov, A.A, Fedorov, E.V, Bonanno, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-10-16
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Crystal structure of phosphorylated phosphopentomutase from streptococcus mutans
To be Published
4NOF
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Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Polymeric immunoglobulin receptor
Authors:Sampathkumar, P, Kumar, P.R, Ahmed, M, Banu, R, Bhosle, R, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Glenn, A.S, Hillerich, B, Khafizov, K, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-11-19
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor
to be published
4NOB
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Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
Authors:Kumar, P.R, Banu, R, Bhosle, R, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Glenn, A.S, Hillerich, B, Khafizov, K, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-11-19
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor
to be published
4P5N
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Structure of CNAG_02591 from Cryptococcus neoformans
Descriptor: CADMIUM ION, GLYCEROL, Hypothetical protein CNAG_02591, ...
Authors:Ramagopal, U.A, McClelland, E.E, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-03-18
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A Small Protein Associated with Fungal Energy Metabolism Affects the Virulence of Cryptococcus neoformans in Mammals.
Plos Pathog., 12, 2016
4ESK
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BU of 4esk by Molmil
Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 (NYSGRC-006047)IG-like domain
Descriptor: GLYCEROL, Leukocyte-associated immunoglobulin-like receptor 1, POTASSIUM ION, ...
Authors:Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-04-23
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 IG-like domain
to be published
4ETY
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BU of 4ety by Molmil
Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 (NYSGRC-006047) Extra Cellular Domain
Descriptor: 1,2-ETHANEDIOL, Leukocyte-associated immunoglobulin-like receptor 1
Authors:Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-04-24
Release date:2012-06-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 Extra Cellular Domain
to be published
4F0R
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BU of 4f0r by Molmil
Crystal structure of an adenosine deaminase homolog from Chromobacterium violaceum (target NYSGRC-019589) bound Zn and 5'-Methylthioadenosine (unproductive complex)
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 5-methylthioadenosine/S-adenosylhomocysteine deaminase, GLYCEROL, ...
Authors:Kim, J, Vetting, M.W, Sauder, J.M, Burley, S.K, Raushel, F.M, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-05-04
Release date:2012-06-06
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of an adenosine deaminase homolog from Chromobacterium violaceum (target NYSGRC-019589) bound Zn and 5'-Methylthioadenosine (unproductive complex)
To be Published
4F0S
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Crystal structure of an adenosine deaminase homolog from Chromobacterium violaceum (target NYSGRC-019589) with bound inosine.
Descriptor: 5-methylthioadenosine/S-adenosylhomocysteine deaminase, CHLORIDE ION, INOSINE, ...
Authors:Kim, J, Vetting, M.W, Sauder, J.M, Burley, S.K, Raushel, F.M, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-05-04
Release date:2012-06-06
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Crystal structure of an adenosine deaminase homolog from Chromobacterium violaceum (target NYSGRC-019589) with bound inosine.
To be Published
2LRN
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Solution structure of a thiol:disulfide interchange protein from Bacteroides sp.
Descriptor: Thiol:disulfide interchange protein
Authors:Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-04-10
Release date:2012-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a thiol:disulfide interchange protein from Bacteroides sp.
To be Published
2LST
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Solution structure of a thioredoxin from Thermus thermophilus
Descriptor: Thioredoxin
Authors:Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-05-04
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a thioredoxin from Thermus thermophilus
To be Published
2LRT
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Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus
Descriptor: Uncharacterized protein
Authors:Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-04-13
Release date:2012-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus
To be Published
2LS8
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Solution structure of human C-type lectin domain family 4 member D
Descriptor: C-type lectin domain family 4 member D
Authors:Harris, R, Gaudette, J, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-04-23
Release date:2012-05-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human C-type lectin domain family 4 member D
To be Published
4GEK
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Crystal Structure of wild-type CmoA from E.coli
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, SULFATE ION, tRNA (cmo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bonanno, J.B, Bhosle, R, Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-08-02
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function
Nature, 498, 2013
2M4N
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Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans
Descriptor: Protein AFD-1, isoform a
Authors:Harris, R, Hillerich, B, Ahmed, M, Bonanno, J.B, Chamala, S, Evans, B, Lafleur, J, Hammonds, J, Washington, E, Stead, M, Love, J, Attonito, J, Seidel, R.D, Liddington, R.C, Weis, W.I, Nelson, W.J, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)
Deposit date:2013-02-07
Release date:2013-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the putative Ras interaction domain of AFD-1, isoform a from Caenorhabditis elegans
To be Published
4MSV
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Crystal structure of FASL and DcR3 complex
Descriptor: GLYCEROL, MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 6, ...
Authors:Liu, W, Ramagopal, U.A, Zhan, C, Bonanno, J.B, Bhosle, R.C, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-09-18
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3.
Structure, 24, 2016
4HB9
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Crystal structure of a putative FAD containing monooxygenase from Photorhabdus luminescens subsp. laumondii TTO1 (Target PSI-012791)
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Similarities with probable monooxygenase
Authors:Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-27
Release date:2012-10-17
Last modified:2022-06-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Stilbene epoxidation and detoxification in a Photorhabdus luminescens -nematode symbiosis.
J.Biol.Chem., 292, 2017
4N21
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Crystal structure of the GP2 Core Domain from the California Academy of Science Virus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GP2 Ectodomain
Authors:Malashkevich, V.N, Koellhoffer, J.F, Dai, Z, Toro, R, Lai, J.R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-10-04
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Characterization of the Glycoprotein GP2 Core Domain from the CAS Virus, a Novel Arenavirus-Like Species.
J.Mol.Biol., 426, 2014

219869

PDB entries from 2024-05-15

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