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PDB: 760 results

6XBY
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BU of 6xby by Molmil
Cryo-EM structure of V-ATPase from bovine brain, state 2
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, R, Li, X.
Deposit date:2020-06-07
Release date:2020-08-19
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryo-EM structures of intact V-ATPase from bovine brain.
Nat Commun, 11, 2020
8TZP
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BU of 8tzp by Molmil
Structure of human Wnt7a bound to WLS and RECK
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, PALMITOLEIC ACID, Protein Wnt-7a, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
8TZS
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BU of 8tzs by Molmil
Structure of human WLS
Descriptor: Protein wntless homolog
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
1C9W
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BU of 1c9w by Molmil
CHO REDUCTASE WITH NADP+
Descriptor: CHO REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ye, Q, Li, X, Hyndman, D, Flynn, T.G, Jia, Z.
Deposit date:1999-08-03
Release date:2000-01-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of CHO reductase, a member of the aldo-keto reductase superfamily.
Proteins, 38, 2000
5J8J
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BU of 5j8j by Molmil
A histone deacetylase from Saccharomyces cerevisiae
Descriptor: Histone deacetylase HDA1
Authors:Zhu, Y, Shen, H, Li, X, Teng, M.
Deposit date:2016-04-07
Release date:2017-04-19
Method:X-RAY DIFFRACTION (2.716 Å)
Cite:Structural and histone binding ability characterization of the ARB2 domain of a histone deacetylase Hda1 from Saccharomyces cerevisiae.
Sci Rep, 6, 2016
8DJM
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BU of 8djm by Molmil
HMGCR-UBIAD1 Complex State 1
Descriptor: 3-hydroxy-3-methylglutaryl-coenzyme A reductase, CHOLESTEROL HEMISUCCINATE, Digitonin, ...
Authors:Chen, H, Qi, X, Li, X.
Deposit date:2022-07-01
Release date:2022-08-03
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Regulated degradation of HMG CoA reductase requires conformational changes in sterol-sensing domain.
Nat Commun, 13, 2022
8DJK
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BU of 8djk by Molmil
HMGCR-UBIAD1 Complex State 2
Descriptor: 3-hydroxy-3-methylglutaryl-coenzyme A reductase, CHOLESTEROL HEMISUCCINATE, Digitonin, ...
Authors:Chen, H, Qi, X, Li, X.
Deposit date:2022-06-30
Release date:2022-08-03
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Regulated degradation of HMG CoA reductase requires conformational changes in sterol-sensing domain.
Nat Commun, 13, 2022
6P1Y
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BU of 6p1y by Molmil
Crystal structure of Mtb aspartate decarboxylase mutant M117I
Descriptor: AMMONIUM ION, Aspartate 1-decarboxylase alpha chain, Aspartate 1-decarboxylase beta chain, ...
Authors:Sun, Q, Li, X, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2019-05-20
Release date:2020-02-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The molecular basis of pyrazinamide activity on Mycobacterium tuberculosis PanD.
Nat Commun, 11, 2020
6XBL
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BU of 6xbl by Molmil
Structure of human SMO-Gi complex with SAG
Descriptor: 3-chloro-N-[trans-4-(methylamino)cyclohexyl]-N-{[3-(pyridin-4-yl)phenyl]methyl}-1-benzothiophene-2-carboxamide, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Qi, X, Li, X.
Deposit date:2020-06-06
Release date:2020-09-30
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling.
Nat.Chem.Biol., 16, 2020
6XBM
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BU of 6xbm by Molmil
Structure of human SMO-Gi complex with 24(S),25-EC
Descriptor: 17-[3-(3,3-DIMETHYL-OXIRANYL)-1-METHYL-PROPYL]-10,13-DIMETHYL-2,3,4,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYC LOPENTA[A]PHENANTHREN-3-OL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Qi, X, Long, T, Li, X.
Deposit date:2020-06-06
Release date:2020-09-30
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling.
Nat.Chem.Biol., 16, 2020
6XBK
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BU of 6xbk by Molmil
Structure of human SMO-G111C/I496C complex with Gi
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Qi, X, Long, T, Li, X.
Deposit date:2020-06-06
Release date:2020-09-30
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling.
Nat.Chem.Biol., 16, 2020
6XBJ
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BU of 6xbj by Molmil
Structure of human SMO-D384R complex with Gi
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Qi, X, Long, T, Li, X.
Deposit date:2020-06-06
Release date:2020-09-30
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling.
Nat.Chem.Biol., 16, 2020
5ADY
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BU of 5ady by Molmil
Cryo-EM structures of the 50S ribosome subunit bound with HflX
Descriptor: 23S RRNA, 50S RIBOSOMAL PROTEIN L1, 50S RIBOSOMAL PROTEIN L10, ...
Authors:Zhang, Y, Mandava, C.S, Cao, W, Li, X, Zhang, D, Li, N, Zhang, Y, Zhang, X, Qin, Y, Mi, K, Lei, J, Sanyal, S, Gao, N.
Deposit date:2015-08-25
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Hflx is a Ribosome Splitting Factor Rescuing Stalled Ribosomes Under Stress Conditions
Nat.Struct.Mol.Biol., 22, 2015
8T07
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BU of 8t07 by Molmil
Structure of mouse Myomaker mutant-Y118A bound to Fab18G7
Descriptor: 18G7 Fab heavy chain, 18G7 Fab light chain, Protein myomaker, ...
Authors:Long, T, Li, X.
Deposit date:2023-05-31
Release date:2023-09-27
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structures of Myomaker reveal a molecular basis for myoblast fusion.
Nat.Struct.Mol.Biol., 30, 2023
8T03
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BU of 8t03 by Molmil
Structure of mouse Myomaker bound to Fab18G7 in detergent
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 18G7 Fab heavy chain, 18G7 Fab light chain, ...
Authors:Long, T, Li, X.
Deposit date:2023-05-31
Release date:2023-09-27
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Cryo-EM structures of Myomaker reveal a molecular basis for myoblast fusion.
Nat.Struct.Mol.Biol., 30, 2023
8T06
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BU of 8t06 by Molmil
Structure of mouse Myomaker mutant-R107A bound to Fab18G7
Descriptor: 18G7 Fab heavy chain, 18G7 Fab light chain, Protein myomaker, ...
Authors:Long, T, Li, X.
Deposit date:2023-05-31
Release date:2023-09-27
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structures of Myomaker reveal a molecular basis for myoblast fusion.
Nat.Struct.Mol.Biol., 30, 2023
8T04
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BU of 8t04 by Molmil
Structure of mouse Myomaker bound to Fab18G7 in nanodiscs
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 18G7 Fab heavy chain, 18G7 Fab light chain, ...
Authors:Long, T, Li, X.
Deposit date:2023-05-31
Release date:2023-09-27
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM structures of Myomaker reveal a molecular basis for myoblast fusion.
Nat.Struct.Mol.Biol., 30, 2023
8T05
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BU of 8t05 by Molmil
Structure of Ciona Myomaker bound to Fab1A1
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 1A1 Fab heavy chain, 1A1 Fab light chain, ...
Authors:Long, T, Li, X.
Deposit date:2023-05-31
Release date:2023-09-27
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Cryo-EM structures of Myomaker reveal a molecular basis for myoblast fusion.
Nat.Struct.Mol.Biol., 30, 2023
8SDE
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BU of 8sde by Molmil
Electrostatic-Mediated Tetramerization of the Coiled-Coil Domain in TRIM29
Descriptor: GLYCEROL, Tripartite motif-containing protein 29
Authors:Lou, X.H, Zhuang, Y, Ma, B.B, Li, X.C.
Deposit date:2023-04-06
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Electrostatic-Mediated Tetramerization of the Coiled-Coil Domain in TRIM29
To Be Published
8TZO
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BU of 8tzo by Molmil
Structure of human Wnt7a bound to WLS and CALR
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, Calreticulin, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
8TZR
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BU of 8tzr by Molmil
Structure of human Wnt3a bound to WLS and CALR
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Calreticulin, PALMITOLEIC ACID, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of human Wnt3a bound to WLS and CALR
To Be Published
8FXF
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BU of 8fxf by Molmil
Crystal structure of the coiled-coil domain of TRIM56
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase TRIM56
Authors:Lou, X.H, Ma, B.B, Zhuang, Y, Li, X.C.
Deposit date:2023-01-24
Release date:2023-05-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:TRIM56 coiled-coil domain structure provides insights into its E3 ligase functions.
Comput Struct Biotechnol J, 21, 2023
5VBL
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BU of 5vbl by Molmil
Structure of apelin receptor in complex with agonist peptide
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apelin receptor,Rubredoxin,Apelin receptor Chimera, ZINC ION, ...
Authors:Ma, Y, Yue, Y, Ma, Y, Zhang, Q, Zhou, Q, Song, Y, Shen, Y, Li, X, Ma, X, Li, C, Hanson, M.A, Han, G.W, Sickmier, E.A, Swaminath, G, Zhao, S, Stevems, R.C, Hu, L.A, Zhong, W, Zhang, M, Xu, F.
Deposit date:2017-03-29
Release date:2017-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Apelin Control of the Human Apelin Receptor
Structure, 25, 2017
3T8B
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BU of 3t8b by Molmil
Crystal structure of Mycobacterium tuberculosis MenB with altered hexameric assembly
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, GLYCEROL
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011
3T88
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BU of 3t88 by Molmil
Crystal structure of Escherichia coli MenB in complex with substrate analogue, OSB-NCoA
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011

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PDB entries from 2024-05-15

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