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PDB: 32 results

7Z13
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S. cerevisiae CMGE dimer nucleating origin DNA melting
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
Authors:Lewis, J.S, Sousa, J.S, Costa, A.
Deposit date:2022-02-24
Release date:2022-06-15
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of replication origin melting nucleated by CMG helicase assembly.
Nature, 606, 2022
8V8P
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Sorghum Chalcone Isomerase
Descriptor: 7-HYDROXY-2-(4-HYDROXY-PHENYL)-CHROMAN-4-ONE, Chalcone-flavonone isomerase family protein
Authors:Lewis, J.A, Kang, C.
Deposit date:2023-12-05
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structural and Interactional Analysis of the Flavonoid Pathway Proteins: Chalcone Synthase, Chalcone Isomerase and Chalcone Isomerase-like Protein
Int J Mol Sci, 25, 2024
8V8M
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Switchgrass Chalcone Synthase
Descriptor: COENZYME A, Chalcone synthase, NARINGENIN
Authors:Lewis, J.A, Kang, C.
Deposit date:2023-12-05
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural and Interactional Analysis of the Flavonoid Pathway Proteins: Chalcone Synthase, Chalcone Isomerase and Chalcone Isomerase-like Protein
Int J Mol Sci, 25, 2024
8V8N
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Switchgrass Chalcone Synthase C170S
Descriptor: Chalcone synthase, GLYCEROL
Authors:Lewis, J.A, Kang, C.
Deposit date:2023-12-05
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural and Interactional Analysis of the Flavonoid Pathway Proteins: Chalcone Synthase, Chalcone Isomerase and Chalcone Isomerase-like Protein
Int J Mol Sci, 25, 2024
8V8O
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Switchgrass Chalcone Isomerase-Like Protein
Descriptor: Chalcone-flavonone isomerase family protein
Authors:Lewis, J.A, Kang, C.
Deposit date:2023-12-05
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Structural and Interactional Analysis of the Flavonoid Pathway Proteins: Chalcone Synthase, Chalcone Isomerase and Chalcone Isomerase-like Protein
Int J Mol Sci, 25, 2024
8V8L
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Switchgrass Chalcone Isomerase
Descriptor: Chalcone-flavonone isomerase family protein, GLYCEROL
Authors:Lewis, J.A, Kang, C.
Deposit date:2023-12-05
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and Interactional Analysis of the Flavonoid Pathway Proteins: Chalcone Synthase, Chalcone Isomerase and Chalcone Isomerase-like Protein
Int J Mol Sci, 25, 2024
7QHS
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S. cerevisiae CMGE nucleating origin DNA melting
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
Authors:Lewis, J.S, Sousa, J.S, Costa, A.
Deposit date:2021-12-14
Release date:2022-06-15
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanism of replication origin melting nucleated by CMG helicase assembly.
Nature, 606, 2022
8FEM
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BU of 8fem by Molmil
Panicum vigratum Dihydroflavonol 4-reductase complexed with NADP
Descriptor: Dihydroflavonol 4-Reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lewis, J.A, Kang, C.
Deposit date:2022-12-06
Release date:2023-09-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural Similarities and Overlapping Activities among Dihydroflavonol 4-Reductase, Flavanone 4-Reductase, and Anthocyanidin Reductase Offer Metabolic Flexibility in the Flavonoid Pathway.
Int J Mol Sci, 24, 2023
8FEN
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Panicum vigratum Dihydroflavonol 4-reductase complexed with NADP and DHQ
Descriptor: (2R,3R)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Panicum virgatum Dihydroflavonol 4-Reductase
Authors:Lewis, J.A, Kang, C.
Deposit date:2022-12-06
Release date:2023-09-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Similarities and Overlapping Activities among Dihydroflavonol 4-Reductase, Flavanone 4-Reductase, and Anthocyanidin Reductase Offer Metabolic Flexibility in the Flavonoid Pathway.
Int J Mol Sci, 24, 2023
3UKI
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BU of 3uki by Molmil
Crystal structure of reduced OxyR from Porphyromonas gingivalis
Descriptor: OxyR
Authors:Svintradze, D.V, Wright, H.T, Collazo-Santiago, E.A, Lewis, J.P.
Deposit date:2011-11-09
Release date:2013-07-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
6NP6
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BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: Crp/Fnr family transcriptional regulator, GLYCEROL
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
Deposit date:2019-01-17
Release date:2019-06-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
5V30
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BU of 5v30 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: GLYCEROL, SULFATE ION, Transcriptional regulator
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
Deposit date:2017-03-06
Release date:2018-06-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
5T88
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Prolyl oligopeptidase from Pyrococcus furiosus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, PROLINE, ...
Authors:Ellis-Guardiola, K, Lewis, J, Sukumar, N.
Deposit date:2016-09-06
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
6P2V
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BU of 6p2v by Molmil
RebH Variant 10S, Tryptamine 5-halogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
Authors:Andorfer, M.C, Sukumar, N, Lewis, J.C.
Deposit date:2019-05-22
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.553 Å)
Cite:Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
6P00
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BU of 6p00 by Molmil
RebH Variant 8F, Tryptamine 6-halogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
Authors:Andorfer, M.C, Sukumar, N, Lewis, J.C.
Deposit date:2019-05-16
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
6CAN
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BU of 6can by Molmil
Prolyl oligopeptidase mutant S477C from Pyrococcus furiosus
Descriptor: CHLORIDE ION, Prolyl endopeptidase
Authors:Ellis-Guardiola, K, Lewis, J.C, Sukumar, N.
Deposit date:2018-01-31
Release date:2019-02-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
7JLY
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BU of 7jly by Molmil
Crystal Structure of RNA Binding Protein PG1
Descriptor: ACETATE ION, CALCIUM ION, RNA-binding protein
Authors:Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P.
Deposit date:2020-07-30
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:High Resolution Structure of RNA Binding Protein PG1
To be published
3HO7
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BU of 3ho7 by Molmil
Crystal structure of OxyR from Porphyromonas gingivalis
Descriptor: OxyR
Authors:Svintradze, D.V, Wright, H.T, Lewis, J.P.
Deposit date:2009-06-01
Release date:2010-06-09
Last modified:2014-01-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
7JU0
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BU of 7ju0 by Molmil
RebH Variant 0S, Tryptamine 7-halogenase with bound tryptamine
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
Authors:Andorfer, M.C, Sukumar, N, Lewis, J.C.
Deposit date:2020-08-18
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
2VQZ
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BU of 2vqz by Molmil
Structure of the cap-binding domain of influenza virus polymerase subunit PB2 with bound m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Tarendeau, F, Resa-Infante, P, Coloma, R, Crepin, T, Sehr, P, Lewis, J, Ruigrok, R.W.H, Ortin, J, Hart, D.J, Cusack, S.
Deposit date:2008-03-21
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structural Basis for CAP Binding by Influenza Virus Polymerase Subunit Pb2.
Nat.Struct.Mol.Biol., 15, 2008
2LZG
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BU of 2lzg by Molmil
NMR Structure of Mdm2 (6-125) with Pip-1
Descriptor: E3 ubiquitin-protein ligase Mdm2, [(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-1-(cyclopropylmethyl)-2-oxopiperidin-3-yl]acetic acid
Authors:Michelsen, K.B, Jordan, J.B, Lewis, J, Long, A.M, Yang, E, Rew, Y, Zhou, J, Yakowec, P, Schnier, P.D, Huang, X, Poppe, L.
Deposit date:2012-10-02
Release date:2012-11-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Ordering of the N-Terminus of Human MDM2 by Small Molecule Inhibitors.
J.Am.Chem.Soc., 134, 2012
4CB6
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BU of 4cb6 by Molmil
Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 11)
Descriptor: 2,9-N,N-DI(4-CARBOXYBUTYL)-7-N-METHYLGUANINE, IODIDE ION, POLYMERASE BASIC SUBUNIT 2
Authors:Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
Deposit date:2013-10-10
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB5
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 8f)
Descriptor: 9-N-(3-CARBOXY-4-HYDROXYPHENYL)KETOMETHYL-7-N-METHYLGUANINE, CHLORIDE ION, POLYMERASE BASIC SUBUNIT 2
Authors:Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
Deposit date:2013-10-10
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB4
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, POLYMERASE BASIC SUBUNIT 2
Authors:Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
Deposit date:2013-10-10
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB7
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 8e)
Descriptor: 5-[2-(2-azanyl-7-methyl-6-oxidanylidene-1H-purin-9-ium-9-yl)ethanoyl]-2-oxidanyl-benzoic acid, GLYCEROL, POLYMERASE BASIC SUBUNIT 2
Authors:Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
Deposit date:2013-10-10
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013

 

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