Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 211 results

8HVP
DownloadVisualize
BU of 8hvp by Molmil
STRUCTURE AT 2.5-ANGSTROMS RESOLUTION OF CHEMICALLY SYNTHESIZED HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 PROTEASE COMPLEXED WITH A HYDROXYETHYLENE*-BASED INHIBITOR
Descriptor: HIV-1 PROTEASE, INHIBITOR VAL-SER-GLN-ASN-LEU-PSI(CH(OH)-CH2)-VAL-ILE-VAL (U-85548E)
Authors:Jaskolski, M, Miller, M, Tomasselli, A.G, Sawyer, T.K, Staples, D.G, Heinrikson, R.L, Schneider, J, Kent, S.B.H, Wlodawer, A.
Deposit date:1990-10-26
Release date:1993-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure at 2.5-A resolution of chemically synthesized human immunodeficiency virus type 1 protease complexed with a hydroxyethylene-based inhibitor.
Biochemistry, 30, 1991
3SQF
DownloadVisualize
BU of 3sqf by Molmil
Crystal structure of monomeric M-PMV retroviral protease
Descriptor: Protease
Authors:Jaskolski, M, Kazmierczyk, M, Gilski, M, Krzywda, S, Pichova, I, Zabranska, H, Khatib, F, DiMaio, F, Cooper, S, Thompson, J, Popovic, Z, Baker, D, Group, Foldit Contenders
Deposit date:2011-07-05
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6324 Å)
Cite:Crystal structure of a monomeric retroviral protease solved by protein folding game players.
Nat.Struct.Mol.Biol., 18, 2011
1HO3
DownloadVisualize
BU of 1ho3 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF E. COLI L-ASPARAGINASE II (Y25F MUTANT)
Descriptor: ASPARTIC ACID, L-ASPARAGINASE II
Authors:Jaskolski, M, Kozak, M, Lubkowski, P, Palm, J.G, Wlodawer, A.
Deposit date:2000-12-08
Release date:2001-03-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of two highly homologous bacterial L-asparaginases: a case of enantiomorphic space groups.
Acta Crystallogr.,Sect.D, 57, 2001
9EWK
DownloadVisualize
BU of 9ewk by Molmil
Solvent organization in ultrahigh-resolution protein crystal structure at room temperature
Descriptor: Crambin, ETHANOL
Authors:Chen, J.C.-H, Gilski, M, Chang, C, Borek, D, Rosenbaum, G, Lavens, A, Otwinowski, Z, Kubicki, M, Dauter, Z, Jaskolski, M, Joachimiak, A.
Deposit date:2024-04-04
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (0.7 Å)
Cite:Solvent organization in the ultrahigh-resolution crystal structure of crambin at room temperature.
Iucrj, 11, 2024
5I8F
DownloadVisualize
BU of 5i8f by Molmil
Crystal structure of St. John's wort Hyp-1 protein in complex with melatonin
Descriptor: GLYCEROL, N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide, Phenolic oxidative coupling protein, ...
Authors:Sliwiak, J, Dauter, Z, Jaskolski, M.
Deposit date:2016-02-18
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Hyp-1, a Hypericum perforatum PR-10 Protein, in Complex with Melatonin.
Front Plant Sci, 7, 2016
5M65
DownloadVisualize
BU of 5m65 by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenine
Descriptor: 1,2-ETHANEDIOL, ADENINE, Adenosylhomocysteinase, ...
Authors:Manszewski, T, Jaskolski, M.
Deposit date:2016-10-24
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Crystallographic and SAXS studies ofS-adenosyl-l-homocysteine hydrolase fromBradyrhizobium elkanii.
IUCrJ, 4, 2017
5M5K
DownloadVisualize
BU of 5m5k by Molmil
S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine and cordycepin
Descriptor: 3'-DEOXYADENOSINE, ACETATE ION, ADENOSINE, ...
Authors:Manszewski, T, Mueller-Dieckamann, J, Jaskolski, M.
Deposit date:2016-10-21
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystallographic and SAXS studies of S-adenosyl-l-homocysteine hydrolase from Bradyrhizobium elkanii.
IUCrJ, 4, 2017
5M66
DownloadVisualize
BU of 5m66 by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine
Descriptor: ADENOSINE, Adenosylhomocysteinase, DI(HYDROXYETHYL)ETHER, ...
Authors:Manszewski, T, Jaskolski, M.
Deposit date:2016-10-24
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Crystallographic and SAXS studies of S-adenosyl-l-homocysteine hydrolase from Bradyrhizobium elkanii.
IUCrJ, 4, 2017
1QLQ
DownloadVisualize
BU of 1qlq by Molmil
Bovine Pancreatic Trypsin Inhibitor (BPTI) Mutant with Altered Binding Loop Sequence
Descriptor: PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
Authors:Czapinska, H, Krzywda, S, Sheldrick, G.M, Otlewski, J, Jaskolski, M.
Deposit date:1999-09-10
Release date:1999-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:High Resolution Structure of Bovine Pancreatic Trypsin Inhibitor with Altered Binding Loop Sequence
J.Mol.Biol., 295, 1999
8C0I
DownloadVisualize
BU of 8c0i by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200L (acyl-enzyme intermediate)
Descriptor: CHLORIDE ION, Isoaspartyl peptidase subunit alpha, Isoaspartyl peptidase subunit beta, ...
Authors:Sciuk, A, Jaskolski, M, Loch, J.I.
Deposit date:2022-12-16
Release date:2023-05-03
Last modified:2023-06-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
8C23
DownloadVisualize
BU of 8c23 by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200T (monoclinic form M200T#m)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Sciuk, A, Ruszkowski, M, Jaskolski, M, Loch, J.I.
Deposit date:2022-12-21
Release date:2023-05-03
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
6EXI
DownloadVisualize
BU of 6exi by Molmil
NAD-free crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii complexed with adenosine
Descriptor: ADENOSINE, Adenosylhomocysteinase, DI(HYDROXYETHYL)ETHER, ...
Authors:Manszewski, T, Jaskolski, M.
Deposit date:2017-11-08
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.918 Å)
Cite:S-Adenosyl-L-Homocysteine Hydrolase Inhibition by a Synthetic Nicotinamide Cofactor Biomimetic.
Front Microbiol, 9, 2018
7NEN
DownloadVisualize
BU of 7nen by Molmil
Crystal structure of outer surface protein C (OspC) from Borrelia garinii
Descriptor: Outer surface protein C
Authors:Sliwiak, J, Bierwagen, P, Ruszkowski, M, Jaskolski, M, Urbanowicz, A.
Deposit date:2021-02-04
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural studies of outer surface proteins (OspC) from different Borrelia strains
To Be Published
1HFK
DownloadVisualize
BU of 1hfk by Molmil
Asparaginase from Erwinia chrysanthemi, hexagonal form with weak sulfate
Descriptor: L-ASPARAGINE AMIDOHYDROLASE, SULFATE ION
Authors:Lubkowski, J, Palm, G.J, Kozak, M, Jaskolski, M, Wlodawer, A.
Deposit date:2000-12-05
Release date:2000-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structures of Two Highly Homologous Bacterial L-Asparaginases: A Case of Enantiomorphic Space Groups
Acta Crystallogr.,Sect.D, 57, 2001
1HFJ
DownloadVisualize
BU of 1hfj by Molmil
Asparaginase from Erwinia chrysanthemi, hexagonal form with sulfate
Descriptor: L-ASPARAGINE AMIDOHYDROLASE, SULFATE ION
Authors:Palm, G.J, Lubkowski, J, Kozak, M, Jaskolski, M, Wlodawer, A.
Deposit date:2000-12-05
Release date:2000-12-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Two Highly Homologous Bacterial L-Asparaginases: A Case of Enantiomorphic Space Groups
Acta Crystallogr.,Sect.D, 57, 2001
4Y31
DownloadVisualize
BU of 4y31 by Molmil
Crystal structure of yellow lupine LlPR-10.1A protein in ligand-free form
Descriptor: ACETATE ION, Protein LlR18A
Authors:Sliwiak, J, Michalska, K, Sikorski, M.M, Jaskolski, M.
Deposit date:2015-02-10
Release date:2015-12-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystallographic and CD probing of ligand-induced conformational changes in a plant PR-10 protein.
J.Struct.Biol., 193, 2016
2FLH
DownloadVisualize
BU of 2flh by Molmil
Crystal structure of cytokinin-specific binding protein from mung bean in complex with cytokinin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, SODIUM ION, cytokinin-specific binding protein
Authors:Pasternak, O, Bujacz, G.D, Sikorski, M.M, Jaskolski, M.
Deposit date:2006-01-06
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure of Vigna radiata Cytokinin-Specific Binding Protein in Complex with Zeatin.
Plant Cell, 18, 2006
4R15
DownloadVisualize
BU of 4r15 by Molmil
High-resolution crystal structure of Z-DNA in complex with Cr3+ cations
Descriptor: CHROMIUM ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
Authors:Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M.
Deposit date:2014-08-04
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:High-resolution crystal structure of Z-DNA in complex with Cr(3+) cations.
J.Biol.Inorg.Chem., 20, 2015
3IE5
DownloadVisualize
BU of 3ie5 by Molmil
Crystal structure of Hyp-1 protein from Hypericum perforatum (St John's wort) involved in hypericin biosynthesis
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Michalska, K, Fernandes, H, Sikorski, M.M, Jaskolski, M.
Deposit date:2009-07-22
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.688 Å)
Cite:Crystal structure of Hyp-1, a St. John's wort protein implicated in the biosynthesis of hypericin
J.Struct.Biol., 169, 2010
7BGU
DownloadVisualize
BU of 7bgu by Molmil
Mason-Pfizer Monkey Virus Protease mutant C7A/D26N/C106A in complex with peptidomimetic inhibitor
Descriptor: Gag-Pro-Pol polyprotein, PENTAETHYLENE GLYCOL, peptidomimetic inhibitor
Authors:Wosicki, S, Gilski, M, Kazmierczyk, M, Jaskolski, M, Zabranska, H, Pichova, I.
Deposit date:2021-01-08
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.433 Å)
Cite:Crystal structures of inhibitor complexes of M-PMV protease with visible flap loops.
Protein Sci., 30, 2021
7BGT
DownloadVisualize
BU of 7bgt by Molmil
Mason-Pfizer Monkey Virus Protease mutant C7A/D26N/C106A in complex with peptidomimetic inhibitor
Descriptor: ACETATE ION, Gag-Pro-Pol polyprotein, PENTAETHYLENE GLYCOL, ...
Authors:Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I.
Deposit date:2021-01-08
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of inhibitor complexes of M-PMV protease with visible flap loops.
Protein Sci., 30, 2021
6S1U
DownloadVisualize
BU of 6s1u by Molmil
Crystal structure of dimeric M-PMV protease C7A/D26N/C106A mutant in complex with inhibitor
Descriptor: Gag-Pro-Pol polyprotein, PRO-0A1-VAL-PSA-ALA-MET-THR
Authors:Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I.
Deposit date:2019-06-19
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparison of a retroviral protease in monomeric and dimeric states.
Acta Crystallogr D Struct Biol, 75, 2019
6S1W
DownloadVisualize
BU of 6s1w by Molmil
Crystal structure of dimeric M-PMV protease D26N mutant
Descriptor: Gag-Pro-Pol polyprotein
Authors:Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I.
Deposit date:2019-06-19
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Comparison of a retroviral protease in monomeric and dimeric states.
Acta Crystallogr D Struct Biol, 75, 2019
6S1V
DownloadVisualize
BU of 6s1v by Molmil
Crystal structure of dimeric M-PMV protease D26N mutant in complex with inhibitor
Descriptor: Gag-Pro-Pol polyprotein, PRO-0A1-VAL-PSA-ALA-MET-THR
Authors:Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I.
Deposit date:2019-06-19
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Comparison of a retroviral protease in monomeric and dimeric states.
Acta Crystallogr D Struct Biol, 75, 2019
8COL
DownloadVisualize
BU of 8col by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (orthorombic form R4oP-2)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imioloczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
Deposit date:2023-02-28
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon