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PDB: 58 results

2I0F
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Lumazine synthase RibH1 from Brucella abortus (Gene BruAb1_0785, Swiss-Prot entry Q57DY1)
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-08-10
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2O6H
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Lumazine synthase RibH1 from Brucella melitensis (Gene BMEI1187, Swiss-Prot entry Q8YGH2) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-12-07
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2OBX
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Lumazine synthase RibH2 from Mesorhizobium loti (Gene mll7281, Swiss-Prot entry Q986N2) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, PHOSPHATE ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-12-20
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural and kinetic properties of lumazine synthase isoenzymes in the order rhizobiales
J.Mol.Biol., 373, 2007
3PQK
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Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa
Descriptor: Biofilm growth-associated repressor
Authors:Benedetti, C.E, Guimaraes, B.G.
Deposit date:2010-11-26
Release date:2011-06-01
Last modified:2011-08-03
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia.
J.Biol.Chem., 286, 2011
3D5J
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Structure of yeast Grx2-C30S mutant with glutathionyl mixed disulfide
Descriptor: GLUTATHIONE, Glutaredoxin-2, mitochondrial
Authors:Discola, K.F, de Oliveira, M.A, Barcena, J.A, Porras, P, Padilla, C.A, Guimaraes, B.G, Netto, L.E.S.
Deposit date:2008-05-16
Release date:2008-10-28
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural aspects of the distinct biochemical properties of glutaredoxin 1 and glutaredoxin 2 from Saccharomyces cerevisiae.
J.Mol.Biol., 385, 2009
2PO1
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Crystal structure of the P. abyssi exosome RNase PH ring complexed with a single stranded 10-mer poly(A) RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 10-mer poly(A), Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2PO2
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Crystal structure of the P. abyssi exosome RNase PH ring complexed with CDP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-DIPHOSPHATE, Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2KDO
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Structure of the human Shwachman-Bodian-Diamond syndrome protein, SBDS
Descriptor: Ribosome maturation protein SBDS
Authors:de Oliveira, J.F, Sforca, M.L, Blumenschein, T, Guimaraes, B.G, Zanchin, N.I.T, Zeri, A.C.
Deposit date:2009-01-14
Release date:2010-01-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structure, dynamics, and RNA interaction analysis of the human SBDS protein.
J.Mol.Biol., 396, 2010
2F59
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Lumazine synthase RibH1 from Brucella abortus (Gene BruAb1_0785, Swiss-Prot entry Q57DY1) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2005-11-25
Release date:2006-11-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
6OV6
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CRYSTALLOGRAPHIC STRUCTURE OF THE C24 PROTEIN FROM THE ANTARCTIC MICROORGANISM BIZIONIA ARGENTINENSIS
Descriptor: C24 PROTEIN, MANGANESE (II) ION
Authors:Klinke, S, Rinaldi, J, Guimaraes, B.G, Pellizza, L, Aran, M.
Deposit date:2019-05-07
Release date:2020-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of the putative long tail fiber receptor-binding tip of a novel temperate bacteriophage from the Antarctic bacterium Bizionia argentinensis JUB59.
J.Struct.Biol., 212, 2020
2PO0
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Crystal structure of the P. abyssi exosome RNase PH ring complexed with ADP in double conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2PNZ
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Crystal structure of the P. abyssi exosome RNase PH ring complexed with UDP and GMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
4RQI
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BU of 4rqi by Molmil
Structure of TRF2/RAP1 secondary interaction binding site
Descriptor: GLYCEROL, MAGNESIUM ION, Telomeric repeat-binding factor 2, ...
Authors:Miron, S, Guimaraes, B, Gaullier, G, Giraud-Panis, M.-J, Gilson, E, Le Du, M.-H.
Deposit date:2014-11-03
Release date:2016-02-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4405 Å)
Cite:A higher-order entity formed by the flexible assembly of RAP1 with TRF2.
Nucleic Acids Res., 44, 2016
3D4M
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Glutaredoxin 2 oxidized structure
Descriptor: Glutaredoxin-2, mitochondrial
Authors:Discola, K.F, de Oliveira, M.A, Barcena, J.A, Porras, P, Guimaraes, B.G, Netto, L.E.S.
Deposit date:2008-05-14
Release date:2008-10-28
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural aspects of the distinct biochemical properties of glutaredoxin 1 and glutaredoxin 2 from Saccharomyces cerevisiae.
J.Mol.Biol., 385, 2009
3ER0
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BU of 3er0 by Molmil
Crystal structure of the full length eIF5A from Saccharomyces cerevisiae
Descriptor: Eukaryotic translation initiation factor 5A-2
Authors:Sanches, M, Dias, C.A.O, Aponi, L.H, Valentini, S.R, Guimaraes, B.
Deposit date:2008-10-01
Release date:2008-12-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal structure of the full length eIF5A from Saccharomyces cerevisiae
To be Published
2REM
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Crystal Structure of oxidoreductase DsbA from Xylella fastidiosa
Descriptor: 8 residue peptide, Disulfide oxidoreductase
Authors:Rinaldi, F.C, Guimaraes, B.G.
Deposit date:2007-09-26
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Residues substitution in the active site of DSBA may compensate for the lack of the canonical motif CPHC
To be Published
3H79
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Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
Descriptor: THIOCYANATE ION, Thioredoxin-like protein
Authors:Santos, C.R, Fessel, M.R, Vieira, L.C, Krieger, M.A, Goldenberg, S, Guimaraes, B.G, Zanchin, N.I.T, Barbosa, J.A.R.G.
Deposit date:2009-04-24
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
TO BE PUBLISHED
2F9L
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3D structure of inactive human Rab11b GTPase
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAB11B, ...
Authors:Scapin, S.M.N, Guimaraes, B.G, Zanchin, N.I.T.
Deposit date:2005-12-06
Release date:2006-04-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of the small GTPase Rab11b reveals critical differences relative to the Rab11a isoform.
J.Struct.Biol., 154, 2006
2F9M
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3D structure of active human Rab11b GTPase
Descriptor: MAGNESIUM ION, NICKEL (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Scapin, S.M.N, Guimaraes, B.G, Zanchin, N.I.T.
Deposit date:2005-12-06
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of the small GTPase Rab11b reveals critical differences relative to the Rab11a isoform.
J.Struct.Biol., 154, 2006
2H7W
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Crystal structure of Chagasin, the endogenous cysteine-protease inhibitor from Trypanosoma cruzi
Descriptor: Chagasin
Authors:Figueiredo da Silva, A.A, Guimaraes, B.G.
Deposit date:2006-06-05
Release date:2006-10-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of chagasin, the endogenous cysteine-protease inhibitor from Trypanosoma cruzi.
J.Struct.Biol., 157, 2007
3NRK
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BU of 3nrk by Molmil
The crystal structure of the leptospiral hypothetical protein LIC12922
Descriptor: LIC12922
Authors:Giuseppe, P.O, Atzingen, M.V, Nascimento, A.L.T.O, Zanchin, N.I.T, Guimaraes, B.G.
Deposit date:2010-06-30
Release date:2010-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of the leptospiral hypothetical protein LIC12922 reveals homology with the periplasmic chaperone SurA.
J.Struct.Biol., 173, 2011
4OWY
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Crystal Structure of Ahp1 from Saccharomyces cerevisiae. Investigating the electron transfers.
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, Peroxiredoxin type-2, ...
Authors:Schultz, L, Genu, V, Breyer, C.A, dos Santos, V.F, Guimaraes, B.G, Netto, L.E.S, de Oliveira, M.A.
Deposit date:2014-02-04
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Ahp1 from Saccharomyces cerevisiae. Investigating the electron transfers.
To be published
4GQN
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Crystallographic structure of trimeric Riboflavin Synthase from Brucella abortus in complex with 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, Riboflavin synthase subunit alpha
Authors:Serer, M.I, Bonomi, H.R, Guimaraes, B.G, Rossi, R.C, Goldbaum, F.A, Klinke, S.
Deposit date:2012-08-23
Release date:2014-03-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic and kinetic study of riboflavin synthase from Brucella abortus, a chemotherapeutic target with an enhanced intrinsic flexibility.
Acta Crystallogr.,Sect.D, 70, 2014
4P3Z
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Chlamydia pneumoniae CopN (D29 construct)
Descriptor: CopN, GLYCEROL, SULFATE ION
Authors:Nawrotek, A, Guimaraes, B.G, Knossow, M, Gigant, B.
Deposit date:2014-03-10
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Biochemical and Structural Insights into Microtubule Perturbation by CopN from Chlamydia pneumoniae.
J.Biol.Chem., 289, 2014
4P40
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Chlamydia pneumoniae CopN
Descriptor: CHLORIDE ION, CopN, DIMETHYLAMINE, ...
Authors:Nawrotek, A, Guimaraes, B.G, Knossow, M, Gigant, B.
Deposit date:2014-03-10
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Biochemical and Structural Insights into Microtubule Perturbation by CopN from Chlamydia pneumoniae.
J.Biol.Chem., 289, 2014

219869

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