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PDB: 58 results

8UH1
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Crystal structure of T. brucei EIF4E6 in complex with EIF4G5 peptide
Descriptor: Eukaryotic translation initiation factor 4E type 6, MIF4G domain-containing protein
Authors:Guimaraes, B.G, Penteado, R.F.
Deposit date:2023-10-06
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Structural analysis of the Trypanosoma brucei EIF4E6/EIF4G5 complex reveals details of the interaction between unusual eIF4F subunits.
Sci Rep, 14, 2024
6MD3
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Structure of T. brucei RRP44 PIN domain
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Rrp44p homologue, ...
Authors:Guimaraes, B.G, Cesaro, G.
Deposit date:2018-09-03
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Trypanosoma brucei RRP44 is involved in an early stage of large ribosomal subunit RNA maturation.
RNA Biol, 16, 2019
4MPM
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Wild-type human neuroglobin
Descriptor: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Guimaraes, B.G, Golinelli-Pimpaneau, B.
Deposit date:2013-09-13
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The crystal structure of wild-type human brain neuroglobin reveals flexibility of the disulfide bond that regulates oxygen affinity.
Acta Crystallogr.,Sect.D, 70, 2014
1L2A
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The Crystal Structure and Catalytic Mechanism of Cellobiohydrolase CelS, the Major Enzymatic Component of the Clostridium thermocellum cellulosome
Descriptor: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, cellobiohydrolase
Authors:Guimaraes, B.G, Souchon, H, Lytle, B.L, Wu, J.H.D, Alzari, P.M.
Deposit date:2002-02-20
Release date:2002-07-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.
J.Mol.Biol., 320, 2002
1L1Y
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The Crystal Structure and Catalytic Mechanism of Cellobiohydrolase CelS, the Major Enzymatic Component of the Clostridium thermocellum cellulosome
Descriptor: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, cellobiohydrolase
Authors:Guimaraes, B.G, Souchon, H, Lytle, B.L, Wu, J.H.D, Alzari, P.M.
Deposit date:2002-02-20
Release date:2002-07-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.
J.Mol.Biol., 320, 2002
3PQJ
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Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa
Descriptor: Biofilm growth-associated repressor
Authors:Guimaraes, B.G, Benedetti, C.E.
Deposit date:2010-11-26
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia.
J.Biol.Chem., 286, 2011
2BMX
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Mycobacterium tuberculosis AhpC
Descriptor: ALKYL HYDROPEROXIDASE C
Authors:Guimaraes, B.G, Alzari, P.M.
Deposit date:2005-03-16
Release date:2005-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Mechanism of the Alkyl Hydroperoxidase Ahpc, a Key Element of the Mycobacterium Tuberculosis Defense System Against Oxidative Stress.
J.Biol.Chem., 280, 2005
6OZU
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Crystal structure of the MIF4G domain of Trypanosoma cruzi translation initiation factor EIF4G5
Descriptor: Eukaryotic translation initiation factor 4 gamma 5, GLYCEROL, SULFATE ION
Authors:Guimaraes, B.G, Santos, L.P.C.
Deposit date:2019-05-16
Release date:2019-12-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the MIF4G domain of the Trypanosoma cruzi translation initiation factor EIF4G5
Acta Crystallogr.,Sect.F, 75, 2019
6O7Y
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Trypanosoma cruzi EIF4E5 translation initiation factor in complex with cap-4
Descriptor: 2-amino-9-[(2R,3R,4S,5R)-5-({[(R)-{[(R)-{[(S)-({(2R,3R,4R,5R)-3-{[(R)-{[(2R,3R,4R,5R)-3-{[(S)-{[(2R,3R,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3-{[(S)-hydroxy{[(2R,3R,4R,5R)-3-hydroxy-4-methoxy-5-(3-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methoxy}phosphoryl]oxy}-4-methoxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}-5-(6-amino-9H-purin-9-yl)-4-methoxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}-5-[6-(dimethylamino)-9H-purin-9-yl]-4-methoxytetrahydrofuran-2-yl}methoxy)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxytetrahydrofuran-2-yl]-7-methyl-6-oxo-6,9-dihydro-3H-purin-7-ium, Putative Eukaryotic translation initiation factor 4E type 5, SULFATE ION
Authors:Guimaraes, B.G, Reolon, L.W.
Deposit date:2019-03-08
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Trypanosoma cruzi EIF4E5 translation factor homologue in complex with mRNA cap-4.
Nucleic Acids Res., 47, 2019
6O80
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Trypanosoma cruzi EIF4E5 translation initiation factor in complex with m7GTP
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Putative Eukaryotic translation initiation factor 4E type 5, SULFATE ION
Authors:Guimaraes, B.G, Reolon, L.W.
Deposit date:2019-03-08
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Trypanosoma cruzi EIF4E5 translation factor homologue in complex with mRNA cap-4.
Nucleic Acids Res., 47, 2019
6O7Z
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Trypanosoma cruzi EIF4E5 translation initiation factor in complex with cap-1
Descriptor: 2-amino-9-[(2R,3R,4S,5R)-5-({[(R)-{[(S)-{[(R)-({(2R,3R,4R,5R)-5-[6-(dimethylamino)-9H-purin-9-yl]-3-hydroxy-4-methoxytetrahydrofuran-2-yl}methoxy)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxytetrahydrofuran-2-yl]-7-methyl-6-oxo-6,9-dihydro-1H-purin-7-ium, Putative Eukaryotic translation initiation factor 4E type 5, SULFATE ION
Authors:Guimaraes, B.G, Reolon, L.W.
Deposit date:2019-03-08
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Trypanosoma cruzi EIF4E5 translation factor homologue in complex with mRNA cap-4.
Nucleic Acids Res., 47, 2019
2P38
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Crystal Structure of Pyrococcus Abyssi Protein Homologue of Saccharomyces Cerevisiae NIP7P
Descriptor: Protein involved in ribosomal biogenesis
Authors:Guimaraes, B.G, Coltri, P.P, Oliveira, C.C, Zanchin, N.I.T.
Deposit date:2007-03-08
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights into the Interaction of the Nip7 PUA Domain with Polyuridine RNA
Biochemistry, 46, 2007
4NLC
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BU of 4nlc by Molmil
Crystal structure of the catalytic core of RRP6 from Trypanosoma brucei, mutant C496S
Descriptor: DI(HYDROXYETHYL)ETHER, Ribosomal RNA processing protein 6
Authors:Barbosa, R.L, Guimaraes, B.G.
Deposit date:2013-11-14
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:RRP6 from Trypanosoma brucei: Crystal Structure of the Catalytic Domain, Association with EAP3 and Activity towards Structured and Non-Structured RNA Substrates
Plos One, 9, 2014
7TUV
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BU of 7tuv by Molmil
Crystal structure of the exoribonucleolytic module of T. brucei RRP44
Descriptor: MAGNESIUM ION, RNA (5'-R(P*GP*GP*UP*U)-3'), Ribonuclease RRP44, ...
Authors:Cesaro, G, Guimaraes, B.G.
Deposit date:2022-02-03
Release date:2023-01-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.225 Å)
Cite:Trypanosoma brucei RRP44: a versatile enzyme for processing structured and non-structured RNA substrates.
Nucleic Acids Res., 51, 2023
1T13
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BU of 1t13 by Molmil
Crystal Structure Of Lumazine Synthase From Brucella Abortus Bound To 5-nitro-6-(D-ribitylamino)-2,4(1H,3H) pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION
Authors:Klinke, S, Zylberman, V, Vega, D.R, Guimaraes, B.G, Braden, B.C, Goldbaum, F.A.
Deposit date:2004-04-15
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic studies on Decameric Brucella spp. Lumazine Synthase: A Novel Quaternary Arrangement Evolved for a New Function?
J.Mol.Biol., 353, 2005
2REM
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BU of 2rem by Molmil
Crystal Structure of oxidoreductase DsbA from Xylella fastidiosa
Descriptor: 8 residue peptide, Disulfide oxidoreductase
Authors:Rinaldi, F.C, Guimaraes, B.G.
Deposit date:2007-09-26
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Residues substitution in the active site of DSBA may compensate for the lack of the canonical motif CPHC
To be Published
7KCJ
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The crystal structure of the translation initiation factor EIF4E5 from Leishmania major
Descriptor: Eukaryotic translation initiation factor 4E type 5
Authors:Lima, G.B, Guimaraes, B.G.
Deposit date:2020-10-05
Release date:2021-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The translation initiation factor EIF4E5 from Leishmania: crystal structure and interacting partners.
Rna Biol., 18, 2021
3BWS
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BU of 3bws by Molmil
Crystal structure of the leptospiral antigen Lp49
Descriptor: SULFATE ION, protein Lp49
Authors:Giuseppe, P.O, Neves, F.O, Nascimento, A.L.T.O, Guimaraes, B.G.
Deposit date:2008-01-10
Release date:2008-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The leptospiral antigen Lp49 is a two-domain protein with putative protein binding function
J.Struct.Biol., 163, 2008
4WFS
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BU of 4wfs by Molmil
Crystal Structure of tRNA-dihydrouridine(20) synthase catalytic domain
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, SULFATE ION, ...
Authors:Bou-Nader, C, Pecqueur, L, Kamah, A, Bregeon, D, Golinelli-Pimpaneau, B, Guimaraes, B.G, Fontecave, M, Hamdane, D.
Deposit date:2014-09-17
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:An extended dsRBD is required for post-transcriptional modification in human tRNAs.
Nucleic Acids Res., 43, 2015
4WFT
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BU of 4wft by Molmil
Crystal structure of tRNA-dihydrouridine(20) synthase dsRBD domain
Descriptor: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Authors:Bou-Nader, C, Pecqueur, L, Kamah, A, Bregeon, D, Golinelli-Pimpaneau, B, Guimaraes, B.G, Fontecave, M, Hamdane, D.
Deposit date:2014-09-17
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An extended dsRBD is required for post-transcriptional modification in human tRNAs.
Nucleic Acids Res., 43, 2015
3NRK
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BU of 3nrk by Molmil
The crystal structure of the leptospiral hypothetical protein LIC12922
Descriptor: LIC12922
Authors:Giuseppe, P.O, Atzingen, M.V, Nascimento, A.L.T.O, Zanchin, N.I.T, Guimaraes, B.G.
Deposit date:2010-06-30
Release date:2010-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of the leptospiral hypothetical protein LIC12922 reveals homology with the periplasmic chaperone SurA.
J.Struct.Biol., 173, 2011
5EPV
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BU of 5epv by Molmil
Histidine kinase domain from the LOV-HK blue-light receptor from Brucella abortus
Descriptor: Blue-light-activated histidine kinase, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Rinaldi, J, Guimaraes, B.G, Legrand, P, Thompson, A, Paris, G, Goldbaum, F.A, Klinke, S.
Deposit date:2015-11-12
Release date:2016-02-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain.
J.Mol.Biol., 428, 2016
3ITJ
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BU of 3itj by Molmil
Crystal structure of Saccharomyces cerevisiae thioredoxin reductase 1 (Trr1)
Descriptor: CITRIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase 1
Authors:Oliveira, M.A, Discola, K.F, Alves, S.V, Medrano, F.J, Guimaraes, B.G, Netto, L.E.S.
Deposit date:2009-08-28
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into the specificity of thioredoxin reductase-thioredoxin interactions. A structural and functional investigation of the yeast thioredoxin system.
Biochemistry, 49, 2010
3H79
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Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
Descriptor: THIOCYANATE ION, Thioredoxin-like protein
Authors:Santos, C.R, Fessel, M.R, Vieira, L.C, Krieger, M.A, Goldenberg, S, Guimaraes, B.G, Zanchin, N.I.T, Barbosa, J.A.R.G.
Deposit date:2009-04-24
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
TO BE PUBLISHED
1XN1
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Crystal Structure Of Lumazine Synthase From Brucella Abortus (Orthorhombic Form At 3.05 Angstroms)
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION, SODIUM ION, ...
Authors:Klinke, S, Zylberman, V, Vega, D.R, Guimaraes, B.G, Braden, B.C, Goldbaum, F.A.
Deposit date:2004-10-04
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystallographic studies on Decameric Brucella spp. Lumazine Synthase: A Novel Quaternary Arrangement Evolved for a New Function?
J.Mol.Biol., 353, 2005

 

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