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PDB: 88 results

5JQE
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BU of 5jqe by Molmil
Crystal structure of caspase8 tDED
Descriptor: Sugar ABC transporter substrate-binding protein,Caspase-8 chimera
Authors:Fu, T, Li, Y, Lu, A, Wu, H.
Deposit date:2016-05-04
Release date:2016-10-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.157 Å)
Cite:Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.
Mol. Cell, 64, 2016
1LS3
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BU of 1ls3 by Molmil
Crystal Structure of the Complex between Rabbit Cytosolic Serine Hydroxymethyltransferase and TriGlu-5-formyl-tetrahydrofolate
Descriptor: 2-[4-(4-{4-[(2-AMINO-5-FORMYL-4-OXO-3,4,5,6,7,8-HEXAHYDRO-PTERIDIN-6-YLMETHYL)-AMINO]-BENZOYLAMINO}-4-CARBOXY-BUTYRYLAM INO)-4-CARBOXY-BUTYRYLAMINO]-PENTANEDIOIC ACID, GLYCEROL, GLYCINE, ...
Authors:Fu, T.F, Scarsdale, J.N, Kazanina, G, Schirch, V, Wright, H.T.
Deposit date:2002-05-16
Release date:2003-02-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Location of the Pteroylpolyglutamate Binding Site on Rabbit Cytosolic Serine Hydroxymethyltransferase
J.Biol.Chem., 278, 2003
5L08
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BU of 5l08 by Molmil
Cryo-EM structure of Casp-8 tDED filament
Descriptor: Caspase-8
Authors:Fu, T.M, Li, Y, Lu, A, Wu, H.
Deposit date:2016-07-26
Release date:2016-11-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.
Mol.Cell, 64, 2016
5ZAT
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BU of 5zat by Molmil
Crystal structure of 5-carboxylcytosine containing decamer dsDNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*(CAC)P*GP*CP*TP*GP*G)-3')
Authors:Fu, T.R, Zhang, L.
Deposit date:2018-02-08
Release date:2019-02-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine.
Chem Sci, 10, 2019
5ZAS
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BU of 5zas by Molmil
Crystal structure of 5-formylcytosine containing decamer dsDNA
Descriptor: BICARBONATE ION, DNA (5'-D(*CP*CP*AP*GP*(5FC)P*GP*CP*TP*GP*G)-3')
Authors:Fu, T.R, Zhang, L.
Deposit date:2018-02-08
Release date:2019-02-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine.
Chem Sci, 10, 2019
5Z7L
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BU of 5z7l by Molmil
Crystal structure of NDP52 SKICH region in complex with NAP1
Descriptor: 5-azacytidine-induced protein 2, Calcium-binding and coiled-coil domain-containing protein 2, GLYCEROL
Authors:Fu, T, Pan, L.F.
Deposit date:2018-01-29
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Mechanistic insights into the interactions of NAP1 with the SKICH domains of NDP52 and TAX1BP1
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3T0C
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BU of 3t0c by Molmil
Crystal structure of Streptococcus mutans MetE complexed with Zinc
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, SULFATE ION, ZINC ION
Authors:Fu, T.M, Liang, Y.H, Su, X.D.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Crystal Structures of Cobalamin-Independent Methionine Synthase (MetE) from Streptococcus mutans: A Dynamic Zinc-Inversion Model
J.Mol.Biol., 412, 2011
3LFG
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BU of 3lfg by Molmil
Crystal structure of HPr-C-His from Thermoanaerobacter tengcongensis
Descriptor: Phosphotransferase system, HPr-related proteins
Authors:Fu, T.M, Su, X.D.
Deposit date:2010-01-17
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Dimerization of HPr by reversible domain swapping
To be Published
3LE5
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BU of 3le5 by Molmil
Crystal structure of HPr dimer from Thermoanaerobacter tengcongensis
Descriptor: Phosphotransferase system, HPr-related proteins
Authors:Fu, T.M, Su, X.D.
Deposit date:2010-01-14
Release date:2010-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dimerization of HPr by reversible domain swapping
To be Published
3LFJ
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BU of 3lfj by Molmil
Crystal structure of manxB from Thermoanaerobacter tengcongensis
Descriptor: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Authors:Fu, T.M, Su, X.-D.
Deposit date:2010-01-17
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.556 Å)
Cite:Crystal structure of manxA and manxB from Thermoanaerobacter tengcongensis
To be Published
3LE1
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BU of 3le1 by Molmil
Crystal structure of apoHPr monomer from Thermoanaerobacter tengcongensis
Descriptor: CADMIUM ION, Phosphotransferase system, HPr-related proteins
Authors:Fu, T.M, Su, X.D.
Deposit date:2010-01-14
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.513 Å)
Cite:Dimerization of HPr by reversible domain swapping.
To be Published
3L7R
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BU of 3l7r by Molmil
crystal structure of MetE from streptococcus mutans
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, SULFATE ION, ZINC ION
Authors:Fu, T.M, Liang, Y.H, Su, X.D.
Deposit date:2009-12-29
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Crystal Structures of Cobalamin-Independent Methionine Synthase (MetE) from Streptococcus mutans: A Dynamic Zinc-Inversion Model
J.Mol.Biol., 412, 2011
3LE3
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BU of 3le3 by Molmil
Crystal structure of apoHPr monomer from Thermoanaerobacter tengcongensis
Descriptor: Phosphotransferase system, HPr-related proteins
Authors:Fu, T.M, Su, X.D.
Deposit date:2010-01-14
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:Dimerization of HPr by reversible domain swapping
To be Published
3LFH
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BU of 3lfh by Molmil
Crystal structure of manxA from Thermoanaerobacter tengcongensis
Descriptor: Phosphotransferase system, mannose/fructose-specific component IIA
Authors:Fu, T.M, Su, X.-D.
Deposit date:2010-01-17
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Crystal structure of manxA and manxB from Thermoanaerobacter tengcongensis
To be Published
7EAA
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BU of 7eaa by Molmil
crystal structure of NDP52 SKICH domain in complex with RB1CC1 coiled-coil domain
Descriptor: Calcium-binding and coiled-coil domain-containing protein 2, RB1-inducible coiled-coil protein 1
Authors:Fu, T, Pan, L.
Deposit date:2021-03-06
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021
7EA7
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BU of 7ea7 by Molmil
crystal structure of NAP1 LIR in complex with GABARAP
Descriptor: Gamma-aminobutyric acid receptor-associated protein, NAP1_LIR motif
Authors:Fu, T, Pan, L.
Deposit date:2021-03-06
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021
7EA2
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BU of 7ea2 by Molmil
crystal structure of NAP1 FIR in complex with RB1CC1 Claw domain
Descriptor: 5-azacytidine-induced protein 2,RB1-inducible coiled-coil protein 1, CITRATE ANION, DI(HYDROXYETHYL)ETHER, ...
Authors:Fu, T, Pan, L.
Deposit date:2021-03-06
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021
6XKK
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BU of 6xkk by Molmil
Cryo-EM structure of the NLRP1-CARD filament
Descriptor: NACHT, LRR and PYD domains-containing protein 1
Authors:Hollingsworth, L.R, David, L, Li, Y, Sharif, H, Fontana, P, Fu, T, Wu, H.
Deposit date:2020-06-26
Release date:2020-11-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.
Nat Commun, 12, 2021
5FNA
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BU of 5fna by Molmil
Cryo-EM reconstruction of caspase-1 CARD
Descriptor: Caspase-1
Authors:Li, Y, Lu, A, Schmidt, F.I, Yin, Q, Chen, S, Fu, T.M, Tong, A.B, Ploegh, H.L, Mao, Y, Wu, H.
Deposit date:2015-11-11
Release date:2016-03-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Molecular Basis of Caspase-1 Polymerization and its Inhibition by a Novel Capping Mechanism
Nat.Struct.Mol.Biol., 23, 2016
6XKJ
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BU of 6xkj by Molmil
Cryo-EM structure of CARD8-CARD filament
Descriptor: Caspase recruitment domain-containing protein 8
Authors:Hollingsworth, L.R, David, L, Li, Y, Sharif, H, Fontana, P, Fu, T, Wu, H.
Deposit date:2020-06-26
Release date:2020-11-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.
Nat Commun, 12, 2021
7U4T
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BU of 7u4t by Molmil
Human V-ATPase in state 2 with SidK and mEAK-7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, MTOR-associated protein MEAK7, ...
Authors:Wang, L, Fu, T.M.
Deposit date:2022-03-01
Release date:2022-08-24
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Identification of mEAK-7 as a human V-ATPase regulator via cryo-EM data mining.
Proc.Natl.Acad.Sci.USA, 119, 2022
3RNY
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BU of 3rny by Molmil
Crystal structure of human RSK1 C-terminal kinase domain
Descriptor: Ribosomal protein S6 kinase alpha-1, SODIUM ION
Authors:Li, D, Fu, T.-M, Nan, J, Su, X.-D.
Deposit date:2011-04-24
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the autoinhibition of the C-terminal kinase domain of human RSK1.
Acta Crystallogr.,Sect.D, 68, 2012
2NA6
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BU of 2na6 by Molmil
Transmembrane domain of mouse Fas/CD95 death receptor
Descriptor: Tumor necrosis factor receptor superfamily member 6
Authors:Fu, Q, Chou, J.J, Wu, H, Fu, T, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2015-12-21
Release date:2016-01-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis and Functional Role of Intramembrane Trimerization of the Fas/CD95 Death Receptor.
Mol.Cell, 61, 2016
3JBY
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BU of 3jby by Molmil
Cryo-electron microscopy structure of RAG Paired Complex (C2 symmetry)
Descriptor: '-D(P*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3', 5'-D(P*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3', CALCIUM ION, ...
Authors:Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
Deposit date:2015-10-22
Release date:2015-12-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015
3JBX
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BU of 3jbx by Molmil
Cryo-electron microscopy structure of RAG Signal End Complex (C2 symmetry)
Descriptor: 5'-D(*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3', 5'-D(*GP*CP*GP*AP*TP*GP*GP*TP*TP*AP*AP*CP*CP*A)-3', 5'-D(P*GP*TP*CP*TP*GP*TP*AP*GP*CP*AP*CP*TP*GP*TP*G)-3', ...
Authors:Ru, H, Chambers, M.G, Fu, T.-M, Tong, A.B, Liao, M, Wu, H.
Deposit date:2015-10-22
Release date:2015-12-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
Cell(Cambridge,Mass.), 163, 2015

 

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