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PDB: 434 results

2G75
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Crystal Structure of anti-SARS m396 Antibody
Descriptor: IGG Heavy Chain, IGG Light Chain
Authors:Prabakaran, P, Gan, J.H, Feng, Y, Zhu, Z.Y, Xiao, X.D, Ji, X, Dimitrov, D.S.
Deposit date:2006-02-27
Release date:2006-04-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody.
J.Biol.Chem., 281, 2006
7YWA
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BU of 7ywa by Molmil
Structure of DinI in complex with RecA filament
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), DNA damage-inducible protein I, MAGNESIUM ION, ...
Authors:Gao, B, Feng, Y.
Deposit date:2022-08-22
Release date:2022-12-21
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis for regulation of SOS response in bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
1RKN
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Solution structure of 1-110 fragment of Staphylococcal Nuclease with G88W mutation
Descriptor: Thermonuclease
Authors:Liu, D.S, Feng, Y.G, Ye, K.Q, Shan, L, Wang, J.F.
Deposit date:2003-11-22
Release date:2004-12-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
2F3W
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solution structure of 1-110 fragment of staphylococcal nuclease in 2M TMAO
Descriptor: Thermonuclease
Authors:Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J.
Deposit date:2005-11-22
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
8J8O
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BU of 8j8o by Molmil
Structure of Acb2 complexed with 2',3'-cGAMP
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, cGAMP, ...
Authors:Cao, X.L, Xiao, Y, Feng, Y.
Deposit date:2023-05-02
Release date:2024-02-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Phage anti-CBASS protein simultaneously sequesters cyclic trinucleotides and dinucleotides.
Mol.Cell, 84, 2024
6IE0
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BU of 6ie0 by Molmil
X-ray crystal structure of 2R,3R-butanediol dehydrogenase from Bacillus subtilis
Descriptor: (R,R)-butanediol dehydrogenase, ZINC ION
Authors:Wang, X.F, Feng, Y.B, Ji, F.L.
Deposit date:2018-09-12
Release date:2019-09-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.976 Å)
Cite:X-ray crystal structure of 2R,3R-butanediol dehydrogenase from Bacillus subtilis
To Be Published
1MG4
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BU of 1mg4 by Molmil
STRUCTURE OF N-TERMINAL DOUBLECORTIN DOMAIN FROM DCLK: WILD TYPE PROTEIN
Descriptor: DOUBLECORTIN-LIKE KINASE (N-TERMINAL DOMAIN), SULFATE ION
Authors:Kim, M.H, Cierpickil, T, Derewenda, U, Krowarsch, D, Feng, Y, Devedjiev, Y, Dauter, Z, Walsh, C.A, Otlewski, J, Bushweller, J.H, Derewenda, Z.
Deposit date:2002-08-14
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:The DCX-domain Tandems of Doublecortin and Doublecortin-like Kinase
Nat.Struct.Biol., 10, 2003
1MJD
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Structure of N-terminal domain of human doublecortin
Descriptor: DOUBLECORTIN
Authors:Kim, M.H, Cierpicki, T, Derewenda, U, Krowarsch, D, Feng, Y, Devedjiev, Y, Dauter, Z, Walsh, C.A, Otlewski, J, Bushweller, J.H, Derewenda, Z.S.
Deposit date:2002-08-27
Release date:2003-04-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The DCX-domain Tandems of Doublecortin and Doublecortin-like Kinase
Nat.Struct.Biol., 10, 2003
1MFW
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STRUCTURE OF N-TERMINAL DOUBLECORTIN DOMAIN FROM DCLK: SELENOMETHIONINE LABELED PROTEIN
Descriptor: DOUBLECORTIN-LIKE KINASE (N-TERMINAL DOMAIN), SULFATE ION
Authors:Kim, M.H, Cierpickil, T, Derewenda, U, Krowarsch, D, Feng, Y, Devedjiev, Y, Dauter, Z, Walsh, C.A, Otlewski, J, Bushweller, J.H, Derewenda, Z.
Deposit date:2002-08-13
Release date:2003-04-29
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The DCX-domain Tandems of Doublecortin and Doublecortin-like Kinase
Nat.Struct.Biol., 10, 2003
2F3V
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Solution structure of 1-110 fragment of staphylococcal nuclease with V66W mutation
Descriptor: Thermonuclease
Authors:Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J.
Deposit date:2005-11-22
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
2FDX
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BU of 2fdx by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT N137A OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-24
Release date:1997-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
2FAX
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CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: N137A OXIDIZED (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-24
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
2FLV
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BU of 2flv by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T REDUCED (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-19
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
1Q51
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BU of 1q51 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB in Complex with Acetoacetyl-Coenzyme A, a Key Enzyme in Vitamin K2 Biosynthesis
Descriptor: ACETOACETYL-COENZYME A, menB
Authors:Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-08-05
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
6TYS
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BU of 6tys by Molmil
A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Hendra virus infection
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5B3 antibody heavy chain, ...
Authors:Dang, H.V, Chan, Y.P, Park, Y.J, Snijder, J, Da Silva, S.C, Vu, B, Yan, L, Feng, Y.R, Rockx, B, Geisbert, T, Mire, C.E, Broder, C.B, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-09
Release date:2019-10-09
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An antibody against the F glycoprotein inhibits Nipah and Hendra virus infections.
Nat.Struct.Mol.Biol., 26, 2019
5YJ7
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BU of 5yj7 by Molmil
Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae Nannochloropsis
Descriptor: CALCIUM ION, GLYCEROL, Glycoside hydrolase
Authors:Dong, S, Liu, Y.J, Zhou, H.X, Xiao, Y, Xu, J, Cui, Q, Wang, X.Q, Feng, Y.G.
Deposit date:2017-10-09
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insight into a GH1 beta-glucosidase from the oleaginous microalga, Nannochloropsis oceanica.
Int.J.Biol.Macromol., 170, 2021
1MJ3
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BU of 1mj3 by Molmil
Crystal Structure Analysis of rat enoyl-CoA hydratase in complex with hexadienoyl-CoA
Descriptor: ENOYL-COA HYDRATASE, MITOCHONDRIAL, HEXANOYL-COENZYME A
Authors:Bell, A.F, Feng, Y, Hofstein, H.A, Parikh, S, Wu, J, Rudolph, M.J, Kisker, C, Tonge, P.J.
Deposit date:2002-08-26
Release date:2002-09-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Stereoselectivity of Enoyl-CoA Hydratase Results from Preferential Activation of One of Two Bound Substrate Conformers
Chem.Biol., 9, 2002
6U1T
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BU of 6u1t by Molmil
Crystal structure of anti-Nipah virus (NiV) F 5B3 antibody Fab fragment
Descriptor: CHLORIDE ION, antigen-binding (Fab) fragment, heavy chain, ...
Authors:Dang, H.V, Chan, Y.P, Park, Y.J, Snijder, J, Da Silva, S.C, Vu, B, Yan, L, Feng, Y.R, Rockx, B, Geisbert, T, Mire, C, Mire, C.E, BBroder, C.C, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-16
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:An antibody against the F glycoprotein inhibits Nipah and Hendra virus infections.
Nat.Struct.Mol.Biol., 26, 2019
5YJ6
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BU of 5yj6 by Molmil
The exoglucanase CelS from Clostridium thermocellum
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxaoctatriacontane-1,38-diol, Dockerin type I repeat-containing protein
Authors:Liu, Y.J, Liu, S.Y, Dong, S, Li, R.M, Feng, Y.G, Cui, Q.
Deposit date:2017-10-09
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Determination of the native features of the exoglucanase Cel48S from Clostridium thermocellum
Biotechnol Biofuels, 11, 2018
3ELO
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BU of 3elo by Molmil
Crystal Structure of Human Pancreatic Prophospholipase A2
Descriptor: Phospholipase A2, SULFATE ION
Authors:Xu, W, Yi, L, Feng, Y, Chen, L, Liu, J.
Deposit date:2008-09-22
Release date:2009-04-14
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insight into the activation mechanism of human pancreatic prophospholipase A2
J.Biol.Chem., 284, 2009
8X39
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BU of 8x39 by Molmil
Crystal structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
Descriptor: CALCIUM ION, Serine protease
Authors:Chen, C, Dong, S, Feng, Y.
Deposit date:2023-11-12
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding features.
Protein Sci., 33, 2024
8YSA
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BU of 8ysa by Molmil
The co-crystal structure of SARS-CoV-2 Mpro in complex with compound H102
Descriptor: 3C-like proteinase nsp5, BOC-TBG-PHE-ELL
Authors:Zheng, W.Y, Fu, L.F, Feng, Y, Han, P, Qi, J.X.
Deposit date:2024-03-22
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery, Biological Activity, and Structural Mechanism of a Potent Inhibitor of SARS-CoV-2 Main Protease
To Be Published
6ACV
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BU of 6acv by Molmil
the solution NMR structure of MBD domain
Descriptor: Methyl-CpG-binding domain-containing protein 11
Authors:Li, S.L, Feng, Y.Y, Zhou, Y, Ding, Y.M, Liu, K, Nie, Y, Li, F, Yang, Y.Y.
Deposit date:2018-07-27
Release date:2019-07-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:the solution NMR structure of MBD domains
To Be Published
8WBO
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BU of 8wbo by Molmil
Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D18N complexed with sulfate ions
Descriptor: Epoxide hydrolase, SULFATE ION
Authors:Dong, S, Xuan, J.S, Feng, Y.G, Cui, Q.
Deposit date:2023-09-10
Release date:2024-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Deciphering the stereo-specific catalytic mechanisms of cis-epoxysuccinate hydrolases producing L(+)-tartaric acid.
J.Biol.Chem., 300, 2024
1Q52
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BU of 1q52 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB, a Key Enzyme in Vitamin K2 Biosynthesis
Descriptor: menB
Authors:Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-08-05
Release date:2004-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003

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