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PDB: 42 results

3PO3
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BU of 3po3 by Molmil
Arrested RNA Polymerase II reactivation intermediate
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, DNA non-template strand, ...
Authors:Cheung, A.C.M, Cramer, P.
Deposit date:2010-11-21
Release date:2011-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of RNA polymerase II backtracking, arrest and reactivation.
Nature, 471, 2011
3PO2
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BU of 3po2 by Molmil
Arrested RNA Polymerase II elongation complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cheung, A.C.M, Cramer, P.
Deposit date:2010-11-21
Release date:2011-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of RNA polymerase II backtracking, arrest and reactivation.
Nature, 471, 2011
4A3C
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BU of 4a3c by Molmil
RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-11-16
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3M
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RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP* TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*GP*GP*A)-3', ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3D
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BU of 4a3d by Molmil
RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3F
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BU of 4a3f by Molmil
RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*C BRU*GP*GP*TP*CP*AP*TP*T)-3', DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3G
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BU of 4a3g by Molmil
RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2012-02-08
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3I
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BU of 4a3i by Molmil
RNA Polymerase II binary complex with DNA
Descriptor: 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*GP*CP*T)-3', DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2012-02-08
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3E
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BU of 4a3e by Molmil
RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3L
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BU of 4a3l by Molmil
RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3B
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BU of 4a3b by Molmil
RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
4A3J
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BU of 4a3j by Molmil
RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP
Descriptor: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*TP*CP*BRUP*AP*CP*CP *TP*GP*AP*AP*CP*AP*AP*CP*TP*AP*AP*CP)-3', 5'-D(*GP*TP*AP*GP*AP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', 5'-R(*CP*AP)-3', ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Basis of Initial RNA Polymerase II Transcription.
Embo J., 30, 2011
4A3K
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BU of 4a3k by Molmil
RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid
Descriptor: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Basis of Initial RNA Polymerase II Transcription.
Embo J., 30, 2011
2FRH
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BU of 2frh by Molmil
Crystal Structure of Sara, A Transcription Regulator From Staphylococcus Aureus
Descriptor: CALCIUM ION, Staphylococcal accessory regulator A
Authors:Liu, Y, Manna, A.C, Ingavale, S, Cheung, A.L, Zhang, G.
Deposit date:2006-01-19
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6HV9
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BU of 6hv9 by Molmil
S. cerevisiae CMG-Pol epsilon-DNA
Descriptor: Cell division control protein 45, DNA (5'-D(*GP*CP*AP*GP*CP*CP*AP*CP*GP*CP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*A)-3'), DNA (5'-D(P*TP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*GP*CP*GP*TP*GP*GP*CP*TP*GP*C)-3'), ...
Authors:Abid Ali, F, Purkiss, A.G, Cheung, A, Costa, A.
Deposit date:2018-10-10
Release date:2018-12-12
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (4.98 Å)
Cite:Structure of DNA-CMG-Pol epsilon elucidates the roles of the non-catalytic polymerase modules in the eukaryotic replisome.
Nat Commun, 9, 2018
6HV8
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BU of 6hv8 by Molmil
Cryo-EM structure of S. cerevisiae Polymerase epsilon deltacat mutant
Descriptor: DNA polymerase epsilon catalytic subunit A, DNA polymerase epsilon subunit B, ZINC ION
Authors:Goswami, P, Purkiss, A, Cheung, A, Costa, A.
Deposit date:2018-10-10
Release date:2018-12-12
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of DNA-CMG-Pol epsilon elucidates the roles of the non-catalytic polymerase modules in the eukaryotic replisome.
Nat Commun, 9, 2018
6ZGA
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BU of 6zga by Molmil
COPII on membranes, inner coat
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, PRO-PRO-PRO, ...
Authors:Zanetti, G, Hutchings, J, Cheung, A.C.M.
Deposit date:2020-06-18
Release date:2021-02-17
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structure of the complete, membrane-assembled COPII coat reveals a complex interaction network.
Nat Commun, 12, 2021
2FNP
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BU of 2fnp by Molmil
Crystal structure of SarA
Descriptor: Staphylococcal accessory regulator A
Authors:Liu, Y, Manna, A.C, Pan, C.H, Cheung, A.L, Zhang, G.
Deposit date:2006-01-11
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3LPE
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BU of 3lpe by Molmil
Crystal structure of Spt4/5NGN heterodimer complex from Methanococcus jannaschii
Descriptor: DNA-directed RNA polymerase subunit E'', Putative transcription antitermination protein nusG, ZINC ION
Authors:Hirtreiter, A, Damsma, G.E, Cheung, A.C.M, Klose, D, Grohmann, D, Vojnic, E, Martin, A.C.R, Cramer, P, Werner, F.
Deposit date:2010-02-05
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif.
Nucleic Acids Res., 38, 2010
5OJS
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BU of 5ojs by Molmil
Cryo-EM structure of the SAGA and NuA4 coactivator subunit Tra1
Descriptor: Transcription-associated protein 1
Authors:Diaz-Santin, L.M, Lukoyanova, N, Aciyan, E, Cheung, A.C.M.
Deposit date:2017-07-24
Release date:2017-08-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the SAGA and NuA4 coactivator subunit Tra1 at 3.7 angstrom resolution.
Elife, 6, 2017
3TJ1
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BU of 3tj1 by Molmil
Crystal Structure of RNA Polymerase I Transcription Initiation Factor Rrn3
Descriptor: RNA polymerase I-specific transcription initiation factor RRN3
Authors:Blattner, C, Jennebach, S, Herzog, F, Mayer, A, Cheung, A.C.M, Witte, G, Lorenzen, K, Hopfner, K.-P, Heck, A.J.R, Aebersold, R, Cramer, P.
Deposit date:2011-08-23
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth.
Genes Dev., 25, 2011
6T9K
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BU of 6t9k by Molmil
SAGA Core module
Descriptor: Protein SPT3, SAGA-associated factor 73, Transcription factor SPT20, ...
Authors:Wang, H, Cheung, A, Cramer, P.
Deposit date:2019-10-28
Release date:2020-01-29
Last modified:2020-02-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the transcription coactivator SAGA.
Nature, 577, 2020
1P4X
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BU of 1p4x by Molmil
Crystal structure of SarS protein from Staphylococcus Aureus
Descriptor: staphylococcal accessory regulator A homologue
Authors:Li, R, Manna, A.C, Dai, S, Cheung, A.L, Zhang, G.
Deposit date:2003-04-24
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the SarS protein from Staphylococcus aureus
J.BACTERIOL., 185, 2003
4MZP
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BU of 4mzp by Molmil
MazF from S. aureus crystal form III, C2221, 2.7 A
Descriptor: MazF mRNA interferase
Authors:Zorzini, V, Loris, R, van Nuland, N.A.J, Cheung, A.
Deposit date:2013-09-30
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.
Nucleic Acids Res., 42, 2014
4MZT
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BU of 4mzt by Molmil
MazF from S. aureus crystal form II, C2221, 2.3 A
Descriptor: MazF mRNA interferase
Authors:Zorzini, V, Loris, R, van Nuland, N.A.J, Cheung, A.
Deposit date:2013-09-30
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.
Nucleic Acids Res., 42, 2014

 

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