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PDB: 585 results

6L03
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BU of 6l03 by Molmil
structure of PTP-MEG2 and MUNC18-1-pY145 peptide complex
Descriptor: Tyrosine-protein phosphatase non-receptor type 9, stxbp1-pY145 peptide
Authors:Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
Deposit date:2019-09-25
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.084 Å)
Cite:PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6KZQ
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BU of 6kzq by Molmil
structure of PTP-MEG2 and NSF-pY83 peptide complex
Descriptor: NSF-pY83 peptide, Tyrosine-protein phosphatase non-receptor type 9
Authors:Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
Deposit date:2019-09-25
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6M4Q
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BU of 6m4q by Molmil
Cytochrome P450 monooxygenase StvP2 substrate-free structure
Descriptor: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sun, G, Hu, C, Mei, Q, Luo, M, Chen, X, Li, Z, Liu, Y, Deng, Z, Zhang, Z, Sun, Y.
Deposit date:2020-03-08
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Uncovering the cytochrome P450-catalyzed methylenedioxy bridge formation in streptovaricins biosynthesis.
Nat Commun, 11, 2020
7CZH
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BU of 7czh by Molmil
PL24 ulvan lyase-Uly1
Descriptor: CALCIUM ION, GLYCEROL, Uly1
Authors:Zhang, Y.Z, Chen, X.L, Dong, F, Xu, F.
Deposit date:2020-09-08
Release date:2021-04-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Mechanistic Insights into Substrate Recognition and Catalysis of a New Ulvan Lyase of Polysaccharide Lyase Family 24.
Appl.Environ.Microbiol., 87, 2021
7WLT
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BU of 7wlt by Molmil
the Curved Structure of mPIEZO1 in Lipid Bilayer
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, ...
Authors:Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7W6V
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BU of 7w6v by Molmil
Crystal structure of a dicobalt-substituted small laccase at 2.47 angstrom
Descriptor: COBALT (II) ION, Putative copper oxidase
Authors:Yang, X, Wu, F, Wu, W, Chen, X, Fan, S, Yu, P, Mao, L.
Deposit date:2021-12-02
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:A versatile artificial metalloenzyme scaffold enabling direct bioelectrocatalysis in solution.
Sci Adv, 8, 2022
7YJI
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BU of 7yji by Molmil
Crystal structure of Lpg1083 from Legionella pneumophila
Descriptor: ACETATE ION, T4SS effector Lpg1083
Authors:Ge, H, Gao, J, Chen, X.
Deposit date:2022-07-20
Release date:2023-06-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The bacterial effector SidN/Lpg1083 promotes cell death by targeting Lamin-B2.
J Mol Cell Biol, 15, 2023
7UU5
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BU of 7uu5 by Molmil
Crystal structure of APOBEC3G complex with 5'-Overhang dsRNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*CP*CP*GP*CP*AP*GP*CP*G)-3'), RNA (5'-R(P*UP*AP*AP*CP*GP*CP*UP*GP*CP*GP*G)-3'), ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU4
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Crystal structure of APOBEC3G complex with ssRNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*UP*UP*U)-3'), SULFATE ION, ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU3
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BU of 7uu3 by Molmil
Crystal structure of APOBEC3G complex with 3'overhangs RNA-Complex
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(*CP*CP*CP*AP*CP*GP*GP*GP*AP*AP*U)-3'), RNA (5'-R(*CP*CP*CP*GP*UP*GP*GP*GP*AP*AP*U)-3'), ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.099 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7VKM
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BU of 7vkm by Molmil
Crystal structure of TrkA (G595R) kinase domain
Descriptor: Tyrosine-protein kinase receptor
Authors:Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A.
Deposit date:2021-09-30
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations.
Mol.Cancer Ther., 20, 2021
6L6H
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BU of 6l6h by Molmil
Crystal structure of Lpg0189
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein Lpg0189
Authors:Ge, H, Chen, X.
Deposit date:2019-10-29
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Crystal structure of a hypothetical T2SS effector Lpg0189 from Legionella pneumophila reveals a novel protein fold.
Biochem.Biophys.Res.Commun., 521, 2020
6L6G
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BU of 6l6g by Molmil
Crystal structure of SeMet_Lpg0189
Descriptor: GLYCEROL, Uncharacterized protein Lpg0189
Authors:Ge, H, Chen, X.
Deposit date:2019-10-29
Release date:2019-11-27
Last modified:2020-01-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of a hypothetical T2SS effector Lpg0189 from Legionella pneumophila reveals a novel protein fold.
Biochem.Biophys.Res.Commun., 521, 2020
7WLU
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BU of 7wlu by Molmil
The Flattened Structure of mPIEZO1 in Lipid Bilayer
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Piezo-type mechanosensitive ion channel component 1
Authors:Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (6.81 Å)
Cite:Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7JKS
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BU of 7jks by Molmil
Crystal structure of vaccine-elicited broadly neutralizing VRC01-class antibody 2411a in complex with HIV-1 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 gp120 core, The heavy chain of antibody 2411a, ...
Authors:Zhou, T, Chen, X, Kwong, P.D, Mascola, J.R.
Deposit date:2020-07-28
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Vaccination induces maturation in a mouse model of diverse unmutated VRC01-class precursors to HIV-neutralizing antibodies with >50% breadth.
Immunity, 54, 2021
7JKT
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BU of 7jkt by Molmil
Crystal structure of vaccine-elicited broadly neutralizing VRC01-class antibody 2413a in complex with HIV-1 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 gp120 core from strain d45-01dG5, ...
Authors:Zhou, T, Chen, X, Kwong, P.D, Mascola, J.R.
Deposit date:2020-07-28
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Vaccination induces maturation in a mouse model of diverse unmutated VRC01-class precursors to HIV-neutralizing antibodies with >50% breadth.
Immunity, 54, 2021
7VKO
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BU of 7vko by Molmil
Crystal structure of TrkA kinase with repotrectinib
Descriptor: Repotrectinib, SULFATE ION, Tyrosine-protein kinase receptor
Authors:Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A.
Deposit date:2021-09-30
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations.
Mol.Cancer Ther., 20, 2021
7VKN
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BU of 7vkn by Molmil
Crystal structure of TrkA (G595R) kinase with repotrectinib
Descriptor: Repotrectinib, SULFATE ION, Tyrosine-protein kinase receptor
Authors:Murray, B.W, Rogers, E, Zhai, D, Deng, W, Chen, X, Sprengeler, P.A, Zhang, X, Graber, A, Reich, S.H, Stopatschinskaja, S, Solomon, B, Besse, B, Drilon, A.
Deposit date:2021-09-30
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Characteristics of Repotrectinib That Enable Potent Inhibition of TRK Fusion Proteins and Resistant Mutations.
Mol.Cancer Ther., 20, 2021
6M4P
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BU of 6m4p by Molmil
Cytochrome P450 monooxygenase StvP2 substrate-bound structure
Descriptor: 6-methoxy-streptovaricin C, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sun, G, Hu, C, Mei, Q, Luo, M, Chen, X, Li, Z, Liu, Y, Deng, Z, Zhang, Z, Sun, Y.
Deposit date:2020-03-08
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Uncovering the cytochrome P450-catalyzed methylenedioxy bridge formation in streptovaricins biosynthesis.
Nat Commun, 11, 2020
7DL2
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BU of 7dl2 by Molmil
Cryo-EM structure of human TSC complex
Descriptor: Hamartin, Isoform 7 of Tuberin, TBC1 domain family member 7, ...
Authors:Yang, H, Yu, Z, Chen, X, Li, J, Li, N, Cheng, J, Gao, N, Yuan, H, Ye, D, Guan, K, Xu, Y.
Deposit date:2020-11-25
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural insights into TSC complex assembly and GAP activity on Rheb.
Nat Commun, 12, 2021
6IZK
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BU of 6izk by Molmil
Structural characterization of mutated NreA protein in nitrate binding site from Staphylococcus aureus
Descriptor: CHLORIDE ION, IMIDAZOLE, L(+)-TARTARIC ACID, ...
Authors:Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2018-12-19
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural characterization of mutated NreA protein in nitrate binding site from Staphylococcus aureus
To Be Published
6JQF
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BU of 6jqf by Molmil
Crystallization analysis of a beta-N-acetylhexosaminidase (Am2136) from Akkermansia muciniphila
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glycoside hydrolase, ...
Authors:Zhang, M, Chen, X.
Deposit date:2019-03-31
Release date:2019-12-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical characteristics and crystallographic evidence for substrate-assisted catalysis of a beta-N-acetylhexosaminidase in Akkermansia muciniphila.
Biochem.Biophys.Res.Commun., 517, 2019
6LS4
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BU of 6ls4 by Molmil
A novel anti-tumor agent S-40 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-cyclopropylphenyl)sulfonylamino]-4-methyl-N-(pyridin-3-ylmethyl)benzamide, GLYCEROL, ...
Authors:Du, T, Lin, S, Ji, M, Xue, N, Liu, Y, Zhang, K, Lu, D, Chen, X, Xu, H.
Deposit date:2020-01-17
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel orally active microtubule destabilizing agent S-40 targets the colchicine-binding site and shows potent antitumor activity.
Cancer Lett., 495, 2020
7VI6
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BU of 7vi6 by Molmil
Crystal structure of GH3 beta-N-acetylhexosaminidase Amuc_2109 from Akkermansia muciniphila
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, MAGNESIUM ION
Authors:Qian, K, Yang, W, Chen, X, Wang, Y, Zhang, M, Wang, M.
Deposit date:2021-09-26
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of a GH3 beta-N-acetylhexosaminidase from Akkermansia muciniphila involved in mucin degradation
Biochem.Biophys.Res.Commun., 589, 2022
7VI7
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BU of 7vi7 by Molmil
Crystal structure of GH3 beta-N-acetylhexosaminidase Amuc_2109 from Akkermansia muciniphila in complex with GlcNAc
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Beta-N-acetylhexosaminidase, CHLORIDE ION, ...
Authors:Qian, K, Yang, W, Chen, X, Wang, Y, Zhang, M, Wang, M.
Deposit date:2021-09-26
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of a GH3 beta-N-acetylhexosaminidase from Akkermansia muciniphila involved in mucin degradation
Biochem.Biophys.Res.Commun., 589, 2022

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