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PDB: 49 results

1CKE
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BU of 1cke by Molmil
CMP KINASE FROM ESCHERICHIA COLI FREE ENZYME STRUCTURE
Descriptor: PROTEIN (CYTIDINE MONOPHOSPHATE KINASE), SULFATE ION
Authors:Briozzo, P, Golinelli-Pimpaneau, B.
Deposit date:1998-09-24
Release date:1999-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity.
Structure, 6, 1998
5EGW
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2.70 A crystal structure of the Amb a 11 cysteine protease, a major ragweed pollen allergen, in its proform
Descriptor: Cysteine protease
Authors:Briozzo, P, Kopecny, D.
Deposit date:2015-10-27
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen.
J.Biol.Chem., 291, 2016
5EF4
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2.05 A crystal structure of the Amb a 11 cysteine protease, a major ragweed pollen allergen, in its proform
Descriptor: Cysteine protease, GLYCEROL
Authors:Briozzo, P, Kopecny, D, Savko, M.
Deposit date:2015-10-23
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen.
J.Biol.Chem., 291, 2016
2QKN
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Crystal structure of Maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor CPPU
Descriptor: 1-(2-chloropyridin-4-yl)-3-phenylurea, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Briozzo, P.
Deposit date:2007-07-11
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
Biochimie, 92, 2010
2QPM
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Leu492Ala mutant of Maize cytokinin oxidase/dehydrogenase complexed with benzylurea inhibitor CPBU
Descriptor: 1-benzyl-3-(2-chloropyridin-4-yl)urea, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Briozzo, P.
Deposit date:2007-07-24
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
Biochimie, 92, 2010
2BNE
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BU of 2bne by Molmil
The structure of E. coli UMP kinase in complex with UMP
Descriptor: GLYCEROL, URIDINE-5'-MONOPHOSPHATE, URIDYLATE KINASE
Authors:Briozzo, P, Evrin, C, Meyer, P, Assairi, L, Joly, N, Barzu, O, Gilles, A.M.
Deposit date:2005-03-23
Release date:2005-04-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Escherichia Coli Ump Kinase Differs from that of Other Nucleoside Monophosphate Kinases and Sheds New Light on Enzyme Regulation.
J.Biol.Chem., 280, 2005
2BNF
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BU of 2bnf by Molmil
The structure of E. coli UMP kinase in complex with UTP
Descriptor: GLYCEROL, URIDINE 5'-TRIPHOSPHATE, URIDYLATE KINASE
Authors:Briozzo, P, Evrin, C, Meyer, P, Assairi, L, Joly, N, Barzu, O, Gilles, A.M.
Deposit date:2005-03-23
Release date:2005-04-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of Escherichia Coli Ump Kinase Differs from that of Other Nucleoside Monophosphate Kinases and Sheds New Light on Enzyme Regulation.
J.Biol.Chem., 280, 2005
2BND
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The structure of E. coli UMP kinase in complex with UDP
Descriptor: GLYCEROL, PYROPHOSPHATE 2-, URIDINE-5'-DIPHOSPHATE, ...
Authors:Briozzo, P, Evrin, C, Meyer, P, Assairi, L, Joly, N, Barzu, O, Gilles, A.M.
Deposit date:2005-03-23
Release date:2005-04-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Escherichia Coli Ump Kinase Differs from that of Other Nucleoside Monophosphate Kinases and Sheds New Light on Enzyme Regulation.
J.Biol.Chem., 280, 2005
3BW7
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BU of 3bw7 by Molmil
Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog HA-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokinin dehydrogenase 1, ...
Authors:Briozzo, P, Kopecny, D.
Deposit date:2008-01-08
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor
J.Mol.Biol., 380, 2008
3C0P
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BU of 3c0p by Molmil
Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog HA-8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokinin dehydrogenase 1, ...
Authors:Briozzo, P, Kopecny, D.
Deposit date:2008-01-21
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor
J.Mol.Biol., 380, 2008
3FLC
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BU of 3flc by Molmil
Crystal structure of the His-tagged H232R mutant of glycerol kinase from Enterococcus casseliflavus with glycerol
Descriptor: GLYCEROL, Glycerol kinase, SULFATE ION
Authors:Briozzo, P.
Deposit date:2008-12-18
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Characterizations of Glycerol Kinase: Unraveling Phosphorylation-Induced Long-Range Activation
Biochemistry, 2008
2V4Y
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BU of 2v4y by Molmil
THE STRUCTURE OF E. COLI UMP KINASE IN COMPLEX WITH ITS ALLOSTERIC REGULATOR GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, URIDYLATE KINASE
Authors:Meyer, P, Evrin, C, Briozzo, P, Joly, N, Barzu, O, Gilles, A.M.
Deposit date:2008-09-30
Release date:2008-10-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and Functional Characterization of Escherichia Coli Ump Kinase in Complex with its Allosteric Regulator GTP.
J.Biol.Chem., 283, 2008
6YAQ
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BU of 6yaq by Molmil
Crystal sttructure of ZmCKO8 in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
Descriptor: 1,2-ETHANEDIOL, 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea, Cytokinin dehydrogenase 8, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2020-03-12
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
6YAO
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BU of 6yao by Molmil
Crystal structure of ZmCKO4a in complex with inhibitor 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea
Descriptor: 1,2-ETHANEDIOL, 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea, Cytokinin dehydrogenase 4, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2020-03-12
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
6YAP
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BU of 6yap by Molmil
Crystal structure of ZmCKO4a in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
Descriptor: 1,2-ETHANEDIOL, 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea, Cytokinin dehydrogenase 4, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2020-03-12
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
5HHZ
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BU of 5hhz by Molmil
Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (ZmCKO4) in complex with 6-(3-methylpyrrol-1-yl)-9H-purine
Descriptor: 6-(3-methyl-1H-pyrrol-1-yl)-9H-purine, Cytokinin dehydrogenase 4, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kopecny, D, Briozzo, P.
Deposit date:2016-01-11
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cytokinin metabolism in maize: Novel evidence of cytokinin abundance, interconversions and formation of a new trans-zeatin metabolic product with a weak anticytokinin activity.
Plant Sci., 247, 2016
7ZKT
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BU of 7zkt by Molmil
Moss spermine/spermidine acetyl transferase (PpSSAT) in complex with CoA and lysine
Descriptor: 1,2-ETHANEDIOL, COENZYME A, LYSINE, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A, Briozzo, P.
Deposit date:2022-04-13
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Biochemical and structural basis of polyamine, lysine and ornithine acetylation catalyzed by spermine/spermidine N-acetyl transferase in moss and maize.
Plant J., 114, 2023
5MZ8
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BU of 5mz8 by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in complex with the reaction product succinate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Kopecny, D, Vigouroux, A, Briozzo, P, Morera, S.
Deposit date:2017-01-31
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
5MZ5
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BU of 5mz5 by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in its apoform
Descriptor: 1,2-ETHANEDIOL, ALDH21), DI(HYDROXYETHYL)ETHER, ...
Authors:Kopecny, D, Koncitikova, R, Briozzo, P, Morera, S.
Deposit date:2017-01-30
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
2FEO
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BU of 2feo by Molmil
Mutant R188M of The Cytidine Monophosphate Kinase from E. coli complexed with dCMP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase, SULFATE ION
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
2FEM
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BU of 2fem by Molmil
Mutant R188M of the Cytidine Monophosphate Kinase From E. Coli
Descriptor: Cytidylate kinase
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
5HMR
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BU of 5hmr by Molmil
Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (ZmCKO4) in complex with phenylurea inhibitor 3FMTDZ
Descriptor: 1-(1,2,3-thiadiazol-5-yl)-3-[3-(trifluoromethoxy)phenyl]urea, Cytokinin dehydrogenase 4, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kopecny, D, Koncitikova, R, Briozzo, P.
Deposit date:2016-01-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase.
Plant Mol.Biol., 92, 2016
5HQX
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BU of 5hqx by Molmil
Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (ZmCKO4) in complex with phenylurea inhibitor HETDZ
Descriptor: 1-[2-(2-hydroxyethyl)phenyl]-3-(1,2,3-thiadiazol-5-yl)urea, Cytokinin dehydrogenase 4, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kopecny, D, Koncitikova, R, Briozzo, P.
Deposit date:2016-01-22
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase.
Plant Mol.Biol., 92, 2016
5N5S
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BU of 5n5s by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in complex with NADP+
Descriptor: 1,2-ETHANEDIOL, Aldehyde dehydrogenase 21 (ALDH21), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kopecny, D, Vigouroux, A, Briozzo, P, Morera, S.
Deposit date:2017-02-14
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
4DLA
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BU of 4dla by Molmil
Crystal structure of S-nitrosoglutathione reductase apoenzyme from tomato (Solanum lycopersicum)
Descriptor: Alcohol dehydrogenase class III, GLYCEROL, ZINC ION
Authors:Kopecny, D, Tylichova, M, Briozzo, P.
Deposit date:2012-02-06
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural and functional characterization of a plant S-nitrosoglutathione reductase from Solanum lycopersicum.
Biochimie, 95, 2013

 

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