Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4HU7
DownloadVisualize
BU of 4hu7 by Molmil
E. coli thioredoxin variant with Pro76 as single proline residue
Descriptor: COPPER (II) ION, SODIUM ION, Thioredoxin-1
Authors:Glockshuber, R, Scharer, M.A, Capitani, G, Rubini, M.
Deposit date:2012-11-02
Release date:2013-05-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:(4R)- and (4S)-Fluoroproline in the Conserved cis-Prolyl Peptide Bond of the Thioredoxin Fold: Tertiary Structure Context Dictates Ring Puckering.
Chembiochem, 14, 2013
4W9Z
DownloadVisualize
BU of 4w9z by Molmil
Crystal structure of the periplasmic domain of subunit II of cytochrome oxidase (CoxB) of Bradyrhizobium japonicum
Descriptor: COPPER (II) ION, Cytochrome c oxidase subunit 2
Authors:Quade, N, Abicht, H.K, Hennecke, H, Glockshuber, R.
Deposit date:2014-08-28
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the periplasmic domain of subunit II of cytochrome oxidase (CoxB) of Bradyrhizobium japonicum
To Be Published
5OVW
DownloadVisualize
BU of 5ovw by Molmil
Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli
Descriptor: GLYCEROL, Nanobody, Vitamin B12-binding protein
Authors:Mireku, S.A, Sauer, M.M, Glockshuber, R, Locher, K.P.
Deposit date:2017-08-30
Release date:2017-11-08
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Structural basis of nanobody-mediated blocking of BtuF, the cognate substrate-binding protein of the Escherichia coli vitamin B12 transporter BtuCD.
Sci Rep, 7, 2017
6R7E
DownloadVisualize
BU of 6r7e by Molmil
N-terminally reversed variant of FimA E. coli with alanine insertion at position 20
Descriptor: FimA, SULFATE ION
Authors:Zyla, D, Echeverria, B, Glockshuber, R.
Deposit date:2019-03-28
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
6R74
DownloadVisualize
BU of 6r74 by Molmil
N-terminally reversed variant of FimA E. coli
Descriptor: SULFATE ION, Type-1 fimbrial protein, A chain
Authors:Zyla, D, Echeverria, B, Glockshuber, R.
Deposit date:2019-03-28
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
6Y7S
DownloadVisualize
BU of 6y7s by Molmil
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Zyla, D, Hospenthal, M, Waksman, G, Glockshuber, R.
Deposit date:2020-03-02
Release date:2021-03-31
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
3C7M
DownloadVisualize
BU of 3c7m by Molmil
Crystal structure of reduced DsbL
Descriptor: CADMIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Stirnimann, C.U, Grimshaw, J.P.A, Glockshuber, R, Grutter, M.G, Capitani, G.
Deposit date:2008-02-07
Release date:2008-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:DsbL and DsbI form a specific dithiol oxidase system for periplasmic arylsulfate sulfotransferase in uropathogenic Escherichia coli.
J.Mol.Biol., 380, 2008
1GAM
DownloadVisualize
BU of 1gam by Molmil
GAMMA B CRYSTALLIN TRUNCATED C-TERMINAL DOMAIN
Descriptor: GAMMA B CRYSTALLIN
Authors:Norledge, B.V, Mayr, E.-M, Glockshuber, R, Bateman, O.A, Slingsby, C, Jaenicke, R, Driessen, H.P.C.
Deposit date:1996-02-02
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The X-ray structures of two mutant crystallin domains shed light on the evolution of multi-domain proteins.
Nat.Struct.Biol., 3, 1996
8PSV
DownloadVisualize
BU of 8psv by Molmil
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Hospenthal, M, Zyla, D, Glockshuber, R, Waksman, G.
Deposit date:2023-07-13
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
8PTU
DownloadVisualize
BU of 8ptu by Molmil
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Zyla, D, Hospenthal, M, Glockshuber, R, Waksman, G.
Deposit date:2023-07-14
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
1JAE
DownloadVisualize
BU of 1jae by Molmil
STRUCTURE OF TENEBRIO MOLITOR LARVAL ALPHA-AMYLASE
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Strobl, S, Maskos, K, Betz, M, Wiegand, G, Huber, R, Gomis-Rueth, F.X, Frank, G, Glockshuber, R.
Deposit date:1997-09-30
Release date:1998-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of yellow meal worm alpha-amylase at 1.64 A resolution.
J.Mol.Biol., 278, 1998
8OSY
DownloadVisualize
BU of 8osy by Molmil
Trimeric catalytic domain of the E. coli Dihydrolipoamide Acetyltransferase (E2) of the pyruvate dehydrogenase complex
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Authors:Meinhold, S, Zdanowicz, R, Glockshuber, R.
Deposit date:2023-04-20
Release date:2024-02-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Dimerization of a 5-kDa domain defines the architecture of the 5-MDa gammaproteobacterial pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
8ORB
DownloadVisualize
BU of 8orb by Molmil
24-meric catalytic domain of dihydrolipoamide acetyltransferase (E2) of the E. coli pyruvate dehydrogenase complex.
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Authors:Zdanowicz, R, Meinhold, S, Glockshuber, R.
Deposit date:2023-04-13
Release date:2024-02-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Dimerization of a 5-kDa domain defines the architecture of the 5-MDa gammaproteobacterial pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
8OQJ
DownloadVisualize
BU of 8oqj by Molmil
Peripheral subunit binding domain of the E. coli Dihydrolipoamide Acetyltransferase (E2) of the pyruvate dehydrogenase complex
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, ZINC ION
Authors:Meinhold, S, Zdanowicz, R, Glockshuber, R.
Deposit date:2023-04-12
Release date:2024-02-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Dimerization of a 5-kDa domain defines the architecture of the 5-MDa gammaproteobacterial pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
2FWG
DownloadVisualize
BU of 2fwg by Molmil
high resolution crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (photoreduced form)
Descriptor: Thiol:disulfide interchange protein dsbD
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G.
Deposit date:2006-02-02
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study
J.Mol.Biol., 358, 2006
2FWH
DownloadVisualize
BU of 2fwh by Molmil
atomic resolution crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (reduced form at pH7)
Descriptor: DI(HYDROXYETHYL)ETHER, IODIDE ION, Thiol:disulfide interchange protein dsbD
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G.
Deposit date:2006-02-02
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study
J.Mol.Biol., 358, 2006
2FWF
DownloadVisualize
BU of 2fwf by Molmil
high resolution crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (reduced form)
Descriptor: IODIDE ION, SODIUM ION, Thiol:disulfide interchange protein dsbD
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G.
Deposit date:2006-02-02
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study
J.Mol.Biol., 358, 2006
2FWE
DownloadVisualize
BU of 2fwe by Molmil
crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (oxidized form)
Descriptor: IODIDE ION, NICKEL (II) ION, SODIUM ION, ...
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G.
Deposit date:2006-02-02
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study
J.Mol.Biol., 358, 2006
5LP9
DownloadVisualize
BU of 5lp9 by Molmil
FimA wt from S. flexneri
Descriptor: Major type 1 subunit fimbrin (Pilin)
Authors:Zyla, D, Capitani, G, Prota, A, Glockshuber, R.
Deposit date:2016-08-12
Release date:2017-12-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (0.88626635 Å)
Cite:Alternative folding to a monomer or homopolymer is a common feature of the type 1 pilus subunit FimA from enteroinvasive bacteria.
J.Biol.Chem., 2019
4TXV
DownloadVisualize
BU of 4txv by Molmil
Crystal structure of the mixed disulfide intermediate between thioredoxin-like TlpAs(C110S) and subunit II of cytochrome c oxidase CoxBPD (C233S)
Descriptor: Cytochrome c oxidase subunit 2, Thiol:disulfide interchange protein TlpA
Authors:Quade, N, Abicht, H.K, Hennecke, H, Glockshuber, R.
Deposit date:2014-07-07
Release date:2014-10-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:How Periplasmic Thioredoxin TlpA Reduces Bacterial Copper Chaperone ScoI and Cytochrome Oxidase Subunit II (CoxB) Prior to Metallation.
J.Biol.Chem., 289, 2014
4TXO
DownloadVisualize
BU of 4txo by Molmil
Crystal structure of the mixed disulfide complex of thioredoxin-like TlpAs(C110S) and copper chaperone ScoIs(C74S)
Descriptor: Blr1131 protein, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Scharer, M.A, Abicht, H.K, Glockshuber, R, Hennecke, H.
Deposit date:2014-07-04
Release date:2014-10-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:How Periplasmic Thioredoxin TlpA Reduces Bacterial Copper Chaperone ScoI and Cytochrome Oxidase Subunit II (CoxB) Prior to Metallation.
J.Biol.Chem., 289, 2014
2WCD
DownloadVisualize
BU of 2wcd by Molmil
Crystal structure of the assembled cytolysin A pore
Descriptor: ETHYL MERCURY ION, HEMOLYSIN E, CHROMOSOMAL
Authors:Mueller, M, Grauschopf, U, Maier, T, Glockshuber, R, Ban, N.
Deposit date:2009-03-11
Release date:2009-05-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:The Structure of a Cytolytic Alpha-Helical Toxin Pore Reveals its Assembly Mechanism
Nature, 459, 2009
7OT4
DownloadVisualize
BU of 7ot4 by Molmil
Crystal structure of MsrA variant C198C206 from Escherichia coli, oxidized
Descriptor: POTASSIUM ION, Peptide methionine sulfoxide reductase MsrA
Authors:Napolitano, S, Glockshuber, R.
Deposit date:2021-06-09
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Exploring the unique mechanism of methionine sulphoxide reduction by Escherichia coli
To Be Published
4WBR
DownloadVisualize
BU of 4wbr by Molmil
Structure of Bradyrhizobium japonicum ScoI with copper bound
Descriptor: Blr1131 protein, COPPER (II) ION
Authors:Quade, N, Abicht, H.K, Hennecke, H, Glockshuber, R.
Deposit date:2014-09-03
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Bradyrhizobium japonicum ScoI with copper bound
To Be Published
4WBJ
DownloadVisualize
BU of 4wbj by Molmil
Crystal structure of Bradyrhizobium japonicum ScoI in the oxidized state
Descriptor: Blr1131 protein, SUCCINIC ACID
Authors:Quade, N, Abicht, H.K, Hennecke, H, Glockshuber, R.
Deposit date:2014-09-03
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of Bradyrhizobium japonicum ScoI in the oxidized state
To Be Published

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon