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2P6G
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BU of 2p6g by Molmil
Crystal structures of Saccharomyces cerevisiae N-myristoyltransferase with bound myristoyl-CoA and inhibitors
Descriptor: 1-(CYCLOHEXYLAMINO)-3-(6-METHYL-3,4-DIHYDRO-1H-CARBAZOL-9(2H)-YL)PROPAN-2-OL, Glycylpeptide N-tetradecanoyltransferase, TETRADECANOYL-COA
Authors:Wu, J, Ding, J.
Deposit date:2007-03-18
Release date:2007-06-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Saccharomyces cerevisiae N-myristoyltransferase with bound myristoyl-CoA and inhibitors reveal the functional roles of the N-terminal region.
J.Biol.Chem., 282, 2007
2P6F
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BU of 2p6f by Molmil
Crystal structures of Saccharomyces cerevisiae N-myristoyltransferase with bound myristoyl-CoA and inhibitors
Descriptor: (Z)-3-BENZYL-5-(2-HYDROXY-3-NITROBENZYLIDENE)-2-THIOXOTHIAZOLIDIN-4-ONE, Glycylpeptide N-tetradecanoyltransferase, TETRADECANOYL-COA
Authors:Wu, J, Ding, J.
Deposit date:2007-03-18
Release date:2007-06-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of Saccharomyces cerevisiae N-myristoyltransferase with bound myristoyl-CoA and inhibitors reveal the functional roles of the N-terminal region.
J.Biol.Chem., 282, 2007
8JKS
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BU of 8jks by Molmil
T95R mutant IRF4 DNA-binding domain bound to an DNA containing GAGA motif
Descriptor: GAGA-Forward, GAGA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8JKL
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BU of 8jkl by Molmil
IRF4 DNA-binding domain bound to an DNA containing GATA motif
Descriptor: GATA-Forward, GATA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8JKQ
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BU of 8jkq by Molmil
T95R mutant IRF4 DNA-binding domain bound to an DNA containing GACA motif
Descriptor: GACA-Forward, GACA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8JKN
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BU of 8jkn by Molmil
T95R mutant IRF4 DNA-binding domain bound to an DNA containing GAAA motif
Descriptor: GAAA-Forward, GAAA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8JKO
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BU of 8jko by Molmil
T95R mutant IRF4 DNA-binding domain bound to an DNA containing GATA motif
Descriptor: GATA-Forward, GATA-Reverse, Interferon regulatory factor 4
Authors:Wang, G, Feng, X, Ding, J.
Deposit date:2023-06-01
Release date:2023-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular basis for the functional roles of the multimorphic T95R mutation of IRF4 causing human autosomal dominant combined immunodeficiency.
Structure, 31, 2023
8J6K
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BU of 8j6k by Molmil
Crystal structure of pro-interleukin-18 and caspase-4 complex
Descriptor: Arginine ADP-riboxanase OspC3, Caspase-4 subunit p10, Caspase-4 subunit p20, ...
Authors:Sun, Q, Hou, Y.J, Ding, J.
Deposit date:2023-04-26
Release date:2023-11-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Recognition and maturation of IL-18 by caspase-4 noncanonical inflammasome.
Nature, 624, 2023
8JYY
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BU of 8jyy by Molmil
Crystal structure of the gasdermin-like protein RCD-1-2 from Neurospora crassa
Descriptor: RCD-1-2
Authors:Li, Y, Hou, Y.J, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
8JYV
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BU of 8jyv by Molmil
Crystal structure of the gasdermin from Trichoplax adhaerens
Descriptor: Gasdermin pore forming domain-containing protein
Authors:Zeng, H, Hou, Y.J, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
8JYW
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BU of 8jyw by Molmil
Cryo-EM structure of the gasdermin pore from Trichoplax adhaerens
Descriptor: Gasdermin pore forming domain-containing protein
Authors:Hou, Y.J, Sun, Q, Zeng, H, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
8JYZ
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BU of 8jyz by Molmil
Cryo-EM structure of RCD-1 pore from Neurospora crassa
Descriptor: Gasdermin-like protein rcd-1-1, Gasdermin-like protein rcd-1-2
Authors:Hou, Y.J, Sun, Q, Li, Y, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
8JYX
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BU of 8jyx by Molmil
Crystal structure of the gasdermin-like protein RCD-1-1 from Neurospora crassa
Descriptor: Maltodextrin-binding protein,Gasdermin-like protein rcd-1-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Li, Y, Hou, Y.J, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
3DOF
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BU of 3dof by Molmil
Complex of ARL2 and BART, Crystal Form 2
Descriptor: ADP-ribosylation factor-like protein 2, ADP-ribosylation factor-like protein 2-binding protein, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, T, Li, S, Ding, J.
Deposit date:2008-07-04
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the ARL2-GTP-BART complex reveals a novel recognition and binding mode of small GTPase with effector
Structure, 17, 2009
3EBM
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BU of 3ebm by Molmil
Crystal structure of human translationally controlled tumour associated protein (hTCTP) mutant E12V
Descriptor: Translationally-controlled tumor protein
Authors:Yang, B, Dong, X, Zhong, C, Ding, J.
Deposit date:2008-08-28
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of the acceleration of the GDP-GTP exchange of human ras homolog enriched in brain by human translationally controlled tumor protein.
J.Biol.Chem., 284, 2009
3EOB
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BU of 3eob by Molmil
Crystal structure the Fab fragment of Efalizumab in complex with LFA-1 I domain, Form II
Descriptor: Efalizumab Fab fragment, heavy chain, light chain, ...
Authors:Li, S, Ding, J.
Deposit date:2008-09-26
Release date:2009-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Efalizumab binding to the LFA-1 alphaL I domain blocks ICAM-1 binding via steric hindrance.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EOA
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BU of 3eoa by Molmil
Crystal structure the Fab fragment of Efalizumab in complex with LFA-1 I domain, Form I
Descriptor: Efalizumab Fab fragment, heavy chain, light chain, ...
Authors:Li, S, Ding, J.
Deposit date:2008-09-26
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Efalizumab binding to the LFA-1 alphaL I domain blocks ICAM-1 binding via steric hindrance.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EO9
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BU of 3eo9 by Molmil
Crystal structure the Fab fragment of Efalizumab
Descriptor: Efalizumab Fab fragment, heavy chain, light chain
Authors:Li, S, Ding, J.
Deposit date:2008-09-26
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Efalizumab binding to the LFA-1 alphaL I domain blocks ICAM-1 binding via steric hindrance.
Proc.Natl.Acad.Sci.USA, 106, 2009
5C3S
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BU of 5c3s by Molmil
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and 5-formyluracil (5fU)
Descriptor: 1,2-ETHANEDIOL, 2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde, 2-OXOGLUTARIC ACID, ...
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
5C3P
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BU of 5c3p by Molmil
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, NICKEL (II) ION, ...
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
5C77
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BU of 5c77 by Molmil
A novel protein arginine methyltransferase
Descriptor: Protein arginine N-methyltransferase SFM1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Lv, F, Zhang, T, Ding, J.
Deposit date:2015-06-24
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for Sfm1 functioning as a protein arginine methyltransferase.
Cell Discov, 1, 2015
5C3Q
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BU of 5c3q by Molmil
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and thymine (T)
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, NICKEL (II) ION, ...
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
5C3O
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BU of 5c3o by Molmil
Crystal structure of the C-terminal truncated Neurospora crassa T7H (NcT7HdeltaC) in apo form
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Thymine dioxygenase
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2015-12-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
5C3R
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BU of 5c3r by Molmil
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and 5-hydroxymethyluracil (5hmU)
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 5-HYDROXYMETHYL URACIL, ...
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
5C74
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BU of 5c74 by Molmil
Structure of a novel protein arginine methyltransferase
Descriptor: NICKEL (II) ION, Protein arginine N-methyltransferase SFM1, SULFATE ION
Authors:Lv, F, Ding, J.
Deposit date:2015-06-24
Release date:2016-01-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for Sfm1 functioning as a protein arginine methyltransferase.
Cell Discov, 1, 2015

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PDB entries from 2024-05-22

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