Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2WFD
DownloadVisualize
BU of 2wfd by Molmil
Structure of the human cytosolic leucyl-tRNA synthetase editing domain
Descriptor: LEUCYL-TRNA SYNTHETASE, CYTOPLASMIC
Authors:Seiradake, E, Mao, W, Hernandez, V, Baker, S.J, Plattner, J.J, Alley, M.R.K, Cusack, S.
Deposit date:2009-04-03
Release date:2009-05-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal Structures of the Human and Fungal Cytosolic Leucyl-tRNA Synthetase Editing Domains: A Structural Basis for the Rational Design of Antifungal Benzoxaboroles.
J.Mol.Biol., 390, 2009
2VTW
DownloadVisualize
BU of 2vtw by Molmil
Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre
Descriptor: FIBER PROTEIN 2, GLYCEROL, SULFATE ION
Authors:ElBakkouri, M, Seiradake, E, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
Deposit date:2008-05-16
Release date:2008-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the C-Terminal Head Domain of the Fowl Adenovirus Type 1 Short Fibre.
Virology, 378, 2008
2WFH
DownloadVisualize
BU of 2wfh by Molmil
The Human Slit 2 Dimerization Domain D4
Descriptor: SLIT HOMOLOG 2 PROTEIN C-PRODUCT, SULFATE ION
Authors:Seiradake, E, von Philipsborn, A.C, Henry, M, Fritz, M, Lortat-Jacob, H, Jamin, M, Hemrika, W, Bastmeyer, M, Cusack, S, McCarthy, A.A.
Deposit date:2009-04-06
Release date:2009-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and functional relevance of the Slit2 homodimerization domain.
EMBO Rep., 10, 2009
2WFE
DownloadVisualize
BU of 2wfe by Molmil
Structure of the Candida albicans cytosolic leucyl-tRNA synthetase editing domain
Descriptor: CYTOSOLIC LEUCYL-TRNA SYNTHETASE
Authors:Seiradake, E, Mao, W, Hernandez, V, Baker, S.J, Plattner, J.J, Alley, M.R.K, Cusack, S.
Deposit date:2009-04-04
Release date:2009-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of the Human and Fungal Cytosolic Leucyl-tRNA Synthetase Editing Domains: A Structural Basis for the Rational Design of Antifungal Benzoxaboroles.
J.Mol.Biol., 390, 2009
2VY8
DownloadVisualize
BU of 2vy8 by Molmil
The 627-domain from influenza A virus polymerase PB2 subunit with Glu- 627
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
Deposit date:2008-07-19
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
2VY6
DownloadVisualize
BU of 2vy6 by Molmil
Two domains from the C-terminal region of influenza A virus polymerase PB2 subunit
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
Deposit date:2008-07-18
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
2W4S
DownloadVisualize
BU of 2w4s by Molmil
novel RNA-binding domain in Cryptosporidium parvum at 2.5 angstrom resolution
Descriptor: Ankyrin-repeat protein
Authors:Varrot, A, Mackereth, C, Mourao, A, Sattler, M, Cusack, S.
Deposit date:2008-12-02
Release date:2009-12-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure and RNA Recognition by the Snrna and Snorna Transport Factor Phax.
RNA, 16, 2010
2W69
DownloadVisualize
BU of 2w69 by Molmil
Influenza polymerase fragment
Descriptor: MANGANESE (II) ION, POLYMERASE ACIDIC PROTEIN, SULFATE ION
Authors:Dias, A, Bouvier, D, Crepin, T, McCarthy, A.A, Hart, D.J, Baudin, F, Cusack, S, Ruigrok, R.W.H.
Deposit date:2008-12-17
Release date:2009-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The CAP-Snatching Endonuclease of Influenza Virus Polymerase Resides in the Pa Subunit
Nature, 458, 2009
2WFG
DownloadVisualize
BU of 2wfg by Molmil
Structure of the Candida albicans cytosolic leucyl-tRNA synthetase editing domain bound to a benzoxaborole-AMP adduct
Descriptor: CYTOSOLIC LEUCYL-TRNA SYNTHETASE, [(1S,3S,5R,6R,8R)-6-(6-AMINOPURIN-9-YL)-4'-ETHYLAMINO-3'-FLUORO-SPIRO[2,4,7-TRIOXA-3-BORANUIDABICYCLO[3.3.0]OCTANE-3,7'-8-OXA-7-BORANUIDABICYCLO[4.3.0]NONA-1,3,5-TRIENE]-8-YL]METHYL DIHYDROGEN PHOSPHATE
Authors:Seiradake, E, Mao, W, Hernandez, V, Baker, S.J, Plattner, J.J, Alley, M.R.K, Cusack, S.
Deposit date:2009-04-05
Release date:2009-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of the Human and Fungal Cytosolic Leucyl-tRNA Synthetase Editing Domains: A Structural Basis for the Rational Design of Antifungal Benzoxaboroles.
J.Mol.Biol., 390, 2009
2WJY
DownloadVisualize
BU of 2wjy by Molmil
Crystal structure of the complex between human nonsense mediated decay factors UPF1 and UPF2 Orthorhombic form
Descriptor: REGULATOR OF NONSENSE TRANSCRIPTS 1, SULFATE ION, ZINC ION
Authors:Clerici, M, Mourao, A, Gutsche, I, Gehring, N.H, Hentze, M.W, Kulozik, A, Kadlec, J, Sattler, M, Cusack, S.
Deposit date:2009-06-01
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Unusual Bipartite Mode of Interaction between the Nonsense-Mediated Decay Factors, Upf1 and Upf2.
Embo J., 28, 2009
2WJV
DownloadVisualize
BU of 2wjv by Molmil
Crystal structure of the complex between human nonsense mediated decay factors UPF1 and UPF2
Descriptor: REGULATOR OF NONSENSE TRANSCRIPTS 1, REGULATOR OF NONSENSE TRANSCRIPTS 2, SULFATE ION, ...
Authors:Clerici, M, Mourao, A, Gutsche, I, Gehring, N.H, Hentze, M.W, Kulozik, A, Kadlec, J, Sattler, M, Cusack, S.
Deposit date:2009-06-01
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Unusual Bipartite Mode of Interaction between the Nonsense-Mediated Decay Factors, Upf1 and Upf2.
Embo J., 28, 2009
2XI5
DownloadVisualize
BU of 2xi5 by Molmil
N-terminal endonuclease domain of La Crosse virus L-protein
Descriptor: MANGANESE (II) ION, RNA POLYMERASE L
Authors:Reguera, J, Weber, F, Cusack, S.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2012-07-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bunyaviridae RNA Polymerases (L-Protein) Have an N-Terminal, Influenza-Like Endonuclease Domain, Essential for Viral CAP-Dependent Transcription.
Plos Pathog., 6, 2010
2XI7
DownloadVisualize
BU of 2xi7 by Molmil
N-terminal endonuclease domain of La Crosse virus L-protein
Descriptor: 2-4-DIOXO-4-PHENYLBUTANOIC ACID, MANGANESE (II) ION, RNA POLYMERASE L
Authors:Reguera, J, Weber, F, Cusack, S.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bunyaviridae RNA Polymerases (L-Protein) Have an N-Terminal, Influenza-Like Endonuclease Domain, Essential for Viral CAP-Dependent Transcription.
Plos Pathog., 6, 2010
3ZIU
DownloadVisualize
BU of 3ziu by Molmil
Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site
Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE
Authors:Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T.
Deposit date:2013-01-10
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
4A2Q
DownloadVisualize
BU of 4a2q by Molmil
Structure of duck RIG-I tandem CARDs and helicase domain
Descriptor: RETINOIC ACID INDUCIBLE PROTEIN I
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-28
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4ARC
DownloadVisualize
BU of 4arc by Molmil
Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucine in the editing conformation
Descriptor: LEUCINE, LEUCINE--TRNA LIGASE, MAGNESIUM ION, ...
Authors:Palencia, A, Crepin, T, Vu, M.T, Lincecum Jr, T.L, Martinis, S.A, Cusack, S.
Deposit date:2012-04-23
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Dynamics of the Aminoacylation and Proofreading Functional Cycle of Bacterial Leucyl-tRNA Synthetase
Nat.Struct.Mol.Biol., 19, 2012
4AQ7
DownloadVisualize
BU of 4aq7 by Molmil
Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation
Descriptor: E. COLI TRNALEU UAA ISOACCEPTOR, LEUCINE, LEUCINE--TRNA LIGASE, ...
Authors:Palencia, A, Crepin, T, Vu, M.T, Lincecum Jr, T.L, Martinis, S.A, Cusack, S.
Deposit date:2012-04-13
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Dynamics of the Aminoacylation and Proofreading Functional Cycle of Bacterial Leucyl-tRNA Synthetase
Nat.Struct.Mol.Biol., 19, 2012
4A2V
DownloadVisualize
BU of 4a2v by Molmil
Structure of duck RIG-I C-terminal domain (CTD)
Descriptor: GLYCEROL, RETINOIC ACID INDUCIBLE PROTEIN I, ZINC ION
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-29
Release date:2011-10-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2W
DownloadVisualize
BU of 4a2w by Molmil
Structure of full-length duck RIG-I
Descriptor: RETINOIC ACID INDUCIBLE PROTEIN I
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-29
Release date:2011-10-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4A2X
DownloadVisualize
BU of 4a2x by Molmil
Structure of duck RIG-I C-terminal domain (CTD) with 14-mer dSRNA
Descriptor: 5'-R(*CP*GP*CP*GP*UP*UP*GP*UP*UP*CP*UP*CP*CP*CP)-3', 5'-R(*GP*GP*GP*AP*GP*AP*AP*CP*AP*AP*CP*GP*CP*GP)-3', RETINOIC ACID INDUCIBLE PROTEIN I, ...
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-29
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural basis for the activation of innate immune pattern-recognition receptor RIG-I by viral RNA.
Cell, 147, 2011
4AQQ
DownloadVisualize
BU of 4aqq by Molmil
Dodecahedron formed of penton base protein from adenovirus Ad3
Descriptor: CALCIUM ION, L2 PROTEIN III (PENTON BASE)
Authors:Burmeister, W.P, Szolajska, E, Zochowska, M, Nerlo, B, Andreev, I, Schoehn, G, Andrieu, J.-P, Fender, P, Naskalska, A, Zubieta, C, Cusack, S, Chroboczek, J.
Deposit date:2012-04-19
Release date:2012-10-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.75 Å)
Cite:The Structural Basis for the Integrity of Adenovirus Ad3 Dodecahedron.
Plos One, 7, 2012
4A36
DownloadVisualize
BU of 4a36 by Molmil
Structure of duck RIG-I helicase domain bound to 19-mer dsRNA and ATP transition state analogue
Descriptor: 5'-R(*GP*CP*AP*UP*GP*CP*GP*AP*CP*CP*UP*CP*UP*GP *UP*UP*UP*GP*A)-3', 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-30
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4AR2
DownloadVisualize
BU of 4ar2 by Molmil
Dodecahedron formed of penton base protein from adenovirus Ad3
Descriptor: CALCIUM ION, FIBER PROTEIN, L2 PROTEIN III (PENTON BASE)
Authors:Burmeister, W.P, Szolajska, E, Zochowska, M, Nerlo, B, Andreev, I, Schoehn, G, Andrieu, J.-P, Fender, P, Naskalska, A, Zubieta, C, Cusack, S, Chroboczek, J.
Deposit date:2012-04-20
Release date:2012-10-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The Structural Basis for the Integrity of Adenovirus Ad3 Dodecahedron.
Plos One, 7, 2012
4A2P
DownloadVisualize
BU of 4a2p by Molmil
Structure of duck RIG-I helicase domain
Descriptor: RETINOIC ACID INDUCIBLE PROTEIN I
Authors:Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S.
Deposit date:2011-09-28
Release date:2011-10-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA.
Cell(Cambridge,Mass.), 147, 2011
4AVL
DownloadVisualize
BU of 4avl by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with dTMP
Descriptor: MANGANESE (II) ION, POLYMERASE PA, THYMIDINE-5'-PHOSPHATE
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H.J, Ruigrok, R.W.H, Cusack, S.
Deposit date:2012-05-28
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon