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2N55
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BU of 2n55 by Molmil
Structure of constitutively monomeric CXCL12 in complex with the CXCR4 N-terminus
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Ziarek, J.J, Peterson, F.C, Volkman, B.F.
Deposit date:2015-07-07
Release date:2016-04-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation.
Sci Signal, 10, 2017
1T0Y
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BU of 1t0y by Molmil
Solution Structure of a Ubiquitin-Like Domain from Tubulin-binding Cofactor B
Descriptor: tubulin folding cofactor B
Authors:Lytle, B.L, Peterson, F.C, Qui, S.H, Luo, M, Volkman, B.F, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-04-13
Release date:2004-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a Ubiquitin-like Domain from Tubulin-binding Cofactor B.
J.Biol.Chem., 279, 2004
1SJG
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BU of 1sjg by Molmil
Solution Structure of T4moC, the Rieske Ferredoxin Component of the Toluene 4-Monooxygenase Complex
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Toluene-4-monooxygenase system protein C
Authors:Skjeldal, L, Peterson, F.C, Doreleijers, J.F, Moe, L.A, Pikus, J.D, Volkman, B.F, Westler, W.M, Markley, J.L, Fox, B.G.
Deposit date:2004-03-03
Release date:2004-09-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex
J.Biol.Inorg.Chem., 9, 2004
1RY4
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BU of 1ry4 by Molmil
NMR Structure of the CRIB-PDZ module of Par-6
Descriptor: CG5884-PA
Authors:Peterson, F.C, Penkert, R.R, Volkman, B.F, Prehoda, K.E.
Deposit date:2003-12-19
Release date:2004-03-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Cdc42 Regulates the Par-6 PDZ Domain through an Allosteric CRIB-PDZ Transition.
Mol.Cell, 13, 2004
2QL0
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BU of 2ql0 by Molmil
Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris
Descriptor: Rubredoxin, ZINC ION
Authors:Goodfellow, B.J, Nunes, S.G, Volkman, B.F, Moura, J.G, Macedo, A.L, Duarte, I.C, Markley, J.L, Moura, I.
Deposit date:2007-07-12
Release date:2008-07-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:
To be published
8UEK
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BU of 8uek by Molmil
Solution structure of ACKR3-targeting nanobody VUN701
Descriptor: ACKR3-targeting nanobody VUN701
Authors:Schlimgen, R.R, Peterson, F.C, Volkman, B.F.
Deposit date:2023-10-01
Release date:2024-06-12
Method:SOLUTION NMR
Cite:Structural basis for selectivity and antagonism in extracellular GPCR-nanobodies.
Nat Commun, 15, 2024
7LP5
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BU of 7lp5 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: Angiomotin,E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
7LP4
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BU of 7lp4 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
7MLC
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BU of 7mlc by Molmil
PYL10 bound to the ABA pan-antagonist 4a
Descriptor: 1-{2-[3,5-dicyclopropyl-4-(4-{[(quinoxaline-2-carbonyl)amino]methyl}-1H-1,2,3-triazol-1-yl)phenyl]acetamido}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10, GLYCEROL
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MLD
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BU of 7mld by Molmil
PYL10 bound to the ABA pan-antagonist antabactin
Descriptor: Abscisic acid receptor PYL10, CITRIC ACID, antabactin
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
1B3I
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BU of 1b3i by Molmil
NMR SOLUTION STRUCTURE OF PLASTOCYANIN FROM THE PHOTOSYNTHETIC PROKARYOTE, PROCHLOROTHRIX HOLLANDICA (MINIMIZED AVERAGE STRUCTURE)
Descriptor: COPPER (I) ION, PROTEIN (PLASTOCYANIN)
Authors:Babu, C.R, Volkman, B.F, Bullerjahn, G.S.
Deposit date:1998-12-11
Release date:1999-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR solution structure of plastocyanin from the photosynthetic prokaryote, Prochlorothrix hollandica.
Biochemistry, 38, 1999
7JH1
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BU of 7jh1 by Molmil
Solution structure of a reconstructed XCL1 ancestor
Descriptor: XCL1 ancestor
Authors:Tyler, R.C, Peterson, F.C, Volkman, B.F.
Deposit date:2020-07-20
Release date:2020-12-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Evolution of fold switching in a metamorphic protein.
Science, 371, 2021
2HDL
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BU of 2hdl by Molmil
Solution structure of Brak/CXCL14
Descriptor: Small inducible cytokine B14
Authors:Peterson, F.C, Thorpe, J.A, Harder, A.G, Volkman, B.F, Schwarze, S.R.
Deposit date:2006-06-20
Release date:2006-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Determinants Involved in the Regulation of CXCL14/BRAK Expression by the 26 S Proteasome.
J.Mol.Biol., 363, 2006
2KKD
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BU of 2kkd by Molmil
NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin
Descriptor: NICKEL (II) ION, Rubredoxin
Authors:Nunes, S.G, Volkman, B.F, Moura, J.J.G, Moura, I, Macedo, A.L, Markley, J.L, Duarte, I.C.
Deposit date:2009-06-18
Release date:2009-12-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An NMR structural study of nickel-substituted rubredoxin
J.Biol.Inorg.Chem., 15, 2010
2KVB
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BU of 2kvb by Molmil
Solution structure of CI-MPR domain 5 bound to N-acetylglucosaminyl 6-phosphomethylmannoside
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KY5
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BU of 2ky5 by Molmil
Solution structure of the PECAM-1 cytoplasmic tail with DPC
Descriptor: Platelet endothelial cell adhesion molecule
Authors:Lytle, B.L, Peterson, F.C, Volkman, B.F, Paddock, C, Newman, D.K, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-05-14
Release date:2010-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation.
Blood, 117, 2011
2KVA
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BU of 2kva by Molmil
SOLUTION STRUCTURE OF CI-MPR ligand-free domain 5
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KQR
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BU of 2kqr by Molmil
Solution structure of the N-terminal domain (residues 1-111) of Brugia malayi asparaginyl-tRNA synthetase
Descriptor: Asparaginyl-tRNA synthetase, cytoplasmic
Authors:Volkman, B.F, Peterson, F.C, Kron, M.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-11-16
Release date:2009-12-15
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:A Hybrid Structural Model of the Complete Brugia malayi Cytoplasmic Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 405, 2011
3KB3
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BU of 3kb3 by Molmil
Crystal structure of abscisic acid-bound PYL2 in complex with HAB1
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, MAGNESIUM ION, Protein phosphatase 2C 16, ...
Authors:Zhou, X.E, Melcher, K, Soon, F.-F, Ng, L.-M, Xu, Y, Suino-Powell, K.M, Kovach, A, Li, J, Xu, H.E.
Deposit date:2009-10-20
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors
Nature, 462, 2009
7STA
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BU of 7sta by Molmil
X-ray Crystal Structure of Truncated Human Chemokine CCL19 (7-70)
Descriptor: C-C motif chemokine 19
Authors:Lewandowski, E.M, Kroeck, K, Chen, Y.
Deposit date:2021-11-12
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into Molecular Recognition by Human Chemokine CCL19.
Biochemistry, 61, 2022
4UAI
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BU of 4uai by Molmil
Crystal structure of CXCL12 in complex with inhibitor
Descriptor: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
Authors:Smith, E.W, Chen, Y.
Deposit date:2014-08-09
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
7UR7
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BU of 7ur7 by Molmil
17_bp_sh3, a small beta-barrel de novo designed protein
Descriptor: 17_bp_sh3
Authors:Bera, A.K, Kim, D, Baker, D.
Deposit date:2022-04-21
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UR8
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BU of 7ur8 by Molmil
170_h_ob, a small beta-barrel de novo designed protein
Descriptor: 170_h_ob
Authors:Bera, A.K, Kim, D, Baker, D.
Deposit date:2022-04-21
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
3U7A
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BU of 3u7a by Molmil
AL-09 Y32F Y96F
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-09 Y32F Y96F, variable domain
Authors:DiCostanzo, A.C, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2011-10-13
Release date:2012-07-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tyrosine Residues mediate crucial interactions in amyloid formation for immunoglobulin light chains
To be Published
5EKI
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BU of 5eki by Molmil
Crystal Structure of Truncated CCL21
Descriptor: C-C motif chemokine 21, SULFATE ION
Authors:Lewandowski, E.M, Smith, E.W, Chen, Y.
Deposit date:2015-11-03
Release date:2016-10-05
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site.
Biochemistry, 55, 2016

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