8ENK
Crystal structure of UAP56 in complex with Tho1, the yeast homolog of human SARNP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Spliceosome RNA helicase DDX39B | polymer | 390 | 44905.0 | 2 | UniProt (Q13838) Pfam (PF00270) Pfam (PF00271) In PDB | Homo sapiens (human) | 56 kDa U2AF65-associated protein,ATP-dependent RNA helicase p47,DEAD box protein UAP56,HLA-B-associated transcript 1 protein |
2 | E | Protein THO1 | polymer | 61 | 6775.7 | 1 | UniProt (P40040) Pfam (PF18592) In PDB | Saccharomyces cerevisiae (baker's yeast) | |
3 | M, N | RNA | polymer | 15 | 4547.5 | 2 | synthetic construct | ||
4 | A, B | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
5 | A, B | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 2 | Chemie (BEF) | |||
6 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
7 | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A, B: 44 - 428 (UniProt: Q13838)
E: 123 - 178 (UniProt: P40040)
PDB | External Database | Details |
---|---|---|
Gly 39 | - | expression tag |
Ala 40 | - | expression tag |
Met 41 | - | expression tag |
Gly 42 | - | expression tag |
Ser 43 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 118 | - | expression tag |
Ala 119 | - | expression tag |
Met 120 | - | expression tag |
Gly 121 | - | expression tag |
Ser 122 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 105680.7 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1035.0 | |
All* | Total formula weight | 106715.7 |