7XXH
Cryo-EM structure of the purinergic receptor P2Y1R in complex with 2MeSADP and G11
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | R | P2Y purinoceptor 1 | polymer | 413 | 46296.9 | 1 | UniProt (P47900) Pfam (PF00001) In PDB | Homo sapiens (human) | P2Y1,ADP receptor,Purinergic receptor |
2 | A | Guanine nucleotide-binding protein G(11) subunit alpha | polymer | 353 | 41385.3 | 1 | Pfam (PF00503) UniProt (by SIFTS) (P63096) UniProt (by SIFTS) (P29992) In PDB | Homo sapiens | |
3 | B | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | polymer | 346 | 38245.8 | 1 | UniProt (P62873) Pfam (PF00400) In PDB | Homo sapiens (human) | |
4 | G | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | polymer | 71 | 7861.1 | 1 | UniProt (P59768) Pfam (PF00631) In PDB | Homo sapiens (human) | G gamma-I |
5 | H | scfv16 | polymer | 247 | 26337.3 | 1 | Homo sapiens | ||
6 | R | 2-(methylsulfanyl)adenosine 5'-(trihydrogen diphosphate) | non-polymer | 473.3 | 1 | Chemie (6AD) |
Sequence modifications
R: 2 - 373 (UniProt: P47900)
B: 2 - 340 (UniProt: P62873)
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Pro 1 | - | expression tag |
Glu 374 | - | expression tag |
Phe 375 | - | expression tag |
Leu 376 | - | expression tag |
Glu 377 | - | expression tag |
Val 378 | - | expression tag |
Leu 379 | - | expression tag |
Phe 380 | - | expression tag |
Gln 381 | - | expression tag |
Gly 382 | - | expression tag |
Pro 383 | - | expression tag |
Gly 384 | - | expression tag |
Ser 385 | - | expression tag |
Trp 386 | - | expression tag |
Ser 387 | - | expression tag |
His 388 | - | expression tag |
Pro 389 | - | expression tag |
Gln 390 | - | expression tag |
Phe 391 | - | expression tag |
Glu 392 | - | expression tag |
Lys 393 | - | expression tag |
Gly 394 | - | expression tag |
Ser 395 | - | expression tag |
Gly 396 | - | expression tag |
Ala 397 | - | expression tag |
Gly 398 | - | expression tag |
Ala 399 | - | expression tag |
Ser 400 | - | expression tag |
Ala 401 | - | expression tag |
Gly 402 | - | expression tag |
Ser 403 | - | expression tag |
Trp 404 | - | expression tag |
Ser 405 | - | expression tag |
His 406 | - | expression tag |
Pro 407 | - | expression tag |
Gln 408 | - | expression tag |
Phe 409 | - | expression tag |
Glu 410 | - | expression tag |
Lys 411 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -5 | - | initiating methionine |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 160126.4 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 473.3 | |
All* | Total formula weight | 160599.7 |