7PKT

Large subunit of the Chlamydomonas reinhardtii mitoribosome

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	a	Ribosomal_L2_C domain-containing protein	polymer	383	41087.1	1	UniProt (A0A2K3DL58) Pfam (PF00181) Pfam (PF03947) In PDB	Chlamydomonas reinhardtii
2	b	uL3m	polymer	417	44936.2	1	UniProt (A0A2K3E681) Pfam (PF00297) In PDB	Chlamydomonas reinhardtii
3	c	uL4m	polymer	427	45910.9	1	UniProt (A0A2K3D422) Pfam (PF00573) In PDB	Chlamydomonas reinhardtii
4	d	uL5m	polymer	216	23054.8	1	UniProt (A0A2K3DYN2) In PDB	Chlamydomonas reinhardtii
5	f	50S ribosomal protein L9, chloroplastic	polymer	304	30622.4	1	UniProt (A0A2K3DRF9) Pfam (PF01281) In PDB	Chlamydomonas reinhardtii	CL9
6	i	Mitochondrial ribosomal protein L13	polymer	277	29714.8	1	UniProt (A8J810) Pfam (PF00572) In PDB	Chlamydomonas reinhardtii
7	j	uL14m	polymer	120	13356.7	1	UniProt (A8IYH4) Pfam (PF00238) In PDB	Chlamydomonas reinhardtii
8	k	Ribosomal_L18e/L15P domain-containing protein	polymer	337	35532.3	1	UniProt (A0A2K3D8F3) Pfam (PF00828) In PDB	Chlamydomonas reinhardtii
9	l	Ribosomal_L16 domain-containing protein	polymer	270	27922.5	1	UniProt (A0A2K3DP67) Pfam (PF00252) In PDB	Chlamydomonas reinhardtii
10	m	Mitochondrial ribosomal protein L17,bL17m	polymer	183	21380.7	1	UniProt (A8JH49) UniProt (A0A2K3DXS2) Pfam (PF01196) In PDB	Chlamydomonas reinhardtii
11	n	Mitochondrial ribosomal protein L19	polymer	312	33412.9	1	UniProt (A8I7A8) Pfam (PF01245) In PDB	Chlamydomonas reinhardtii
12	o	50S ribosomal protein L20	polymer	115	13140.5	1	UniProt (A8HNL1) Pfam (PF00453) In PDB	Chlamydomonas reinhardtii
13	p	bL21m	polymer	370	40170.9	1	UniProt (A0A2K3DDN8) Pfam (PF00829) In PDB	Chlamydomonas reinhardtii
14	q	uL22m	polymer	377	39180.1	1	UniProt (A0A2K3DSG6) Pfam (PF00237) In PDB	Chlamydomonas reinhardtii
15	r	Mitochondrial ribosomal protein L23	polymer	226	25593.8	1	UniProt (A8J6R9) In PDB	Chlamydomonas reinhardtii
16	s	KOW domain-containing protein,uL24m	polymer	309	31164.6	1	UniProt (A0A2K3DJU3) Pfam (PF00467) Pfam (PF17136) In PDB	Chlamydomonas reinhardtii
17	t	Ribosomal_TL5_C domain-containing protein	polymer	366	38730.9	1	UniProt (A0A2K3E0K7) Pfam (PF14693) In PDB	Chlamydomonas reinhardtii
18	u	bL27m	polymer	173	18010.9	1	UniProt (A0A2K3E880) Pfam (PF01016) In PDB	Chlamydomonas reinhardtii
19	v	bL28m	polymer	153	17000.6	1	UniProt (A0A2K3D077) In PDB	Chlamydomonas reinhardtii
20	w	uL29m	polymer	127	14799.2	1	UniProt (A8HUW1) In PDB	Chlamydomonas reinhardtii
21	x	Ribosomal_L30 domain-containing protein	polymer	214	24367.8	1	UniProt (A0A2K3DSP9) Pfam (PF00327) In PDB	Chlamydomonas reinhardtii
22	y	bL32m	polymer	123	13370.1	1	UniProt (A8JGW4) Pfam (PF01783) In PDB	Chlamydomonas reinhardtii
23	z	Mitochondrial ribosomal protein L33	polymer	59	6864.2	1	UniProt (A8J9C3) Pfam (PF00471) In PDB	Chlamydomonas reinhardtii
24	A	bL34m	polymer	280	29646.5	1	UniProt (A0A2K3CX36) Pfam (PF00468) In PDB	Chlamydomonas reinhardtii
25	B	bL35m	polymer	151	17494.0	1	UniProt (A0A2K3DKX8) In PDB	Chlamydomonas reinhardtii
26	e	Plastid ribosomal protein L6	polymer	207	22275.3	1	UniProt (A8J503) Pfam (PF00347) In PDB	Chlamydomonas reinhardtii
27	D	mL40	polymer	172	17749.0	1	UniProt (A0A2K3D9N2) In PDB	Chlamydomonas reinhardtii
28	E	mL41	polymer	112	12623.6	1	UniProt (A8J2J1) In PDB	Chlamydomonas reinhardtii
29	F	mL43	polymer	141	16217.6	1	UniProt (A8HW20) In PDB	Chlamydomonas reinhardtii
30	G	Mitochondrial ribosomal protein L17	polymer	259	27320.8	1	UniProt (A8IWI1) In PDB	Chlamydomonas reinhardtii
31	I	mL63/57/60	polymer	132	14645.2	1	UniProt (A8IS96) In PDB	Chlamydomonas reinhardtii
32	J	mL59/64	polymer	134	14372.9	1	UniProt (A8HPK3) In PDB	Chlamydomonas reinhardtii
33	K	mL80	polymer	249	27176.4	1	UniProt (A0A2K3DBX4) In PDB	Chlamydomonas reinhardtii
34	L	mL87	polymer	206	23535.3	1	UniProt (A8J535) In PDB	Chlamydomonas reinhardtii
35	C	bL36m	polymer	36	3081.8	1		Chlamydomonas reinhardtii
36	M	mL113	polymer	876	84437.9	1	UniProt (A0A2K3DVD3) In PDB	Chlamydomonas reinhardtii
37	N	mL114	polymer	455	48757.9	1	UniProt (A0A2K3DR53) In PDB	Chlamydomonas reinhardtii
38	O	mL115	polymer	688	72344.5	1	UniProt (A8J070) In PDB	Chlamydomonas reinhardtii
39	P	mL116	polymer	530	53018.8	1	UniProt (A0A2K3DXQ3) In PDB	Chlamydomonas reinhardtii
40	Q	mL117	polymer	820	75804.1	1	UniProt (A0A2K3CXJ4) In PDB	Chlamydomonas reinhardtii
41	R	mL118	polymer	653	64122.9	1	UniProt (A0A2K3DTE5) In PDB	Chlamydomonas reinhardtii
42	S	mL119	polymer	334	36808.2	1	UniProt (A0A2K3D424) In PDB	Chlamydomonas reinhardtii
43	X	Unk1	polymer	31	2656.3	1		Chlamydomonas reinhardtii
44	Y	PPR*	polymer	172	14656.0	1		Chlamydomonas reinhardtii
45	Z	Unk2	polymer	49	4188.2	1		Chlamydomonas reinhardtii
46	1	L1 rRNA	polymer	162	51976.8	1		Chlamydomonas reinhardtii
47	2	L2a rRNA	polymer	86	27512.2	1		Chlamydomonas reinhardtii
48	0	L3a rRNA (5S)	polymer	75	24033.3	1		Chlamydomonas reinhardtii
49	3	L3b rRNA	polymer	184	59395.2	1		Chlamydomonas reinhardtii
50	4	L4 rRNA	polymer	118	38253.9	1		Chlamydomonas reinhardtii
51	5	L5 rRNA	polymer	149	47720.1	1		Chlamydomonas reinhardtii
52	6	L6 rRNA	polymer	136	43923.3	1		Chlamydomonas reinhardtii
53	7	L7 rRNA	polymer	578	186482.6	1		Chlamydomonas reinhardtii
54	8	L8 rRNA	polymer	413	132907.2	1		Chlamydomonas reinhardtii
55	y	ZINC ION	non-polymer		65.4	1	Chemie (ZN)
56	3, 7, Q, 1, 4...	MAGNESIUM ION	non-polymer		24.3	69	Chemie (MG)
57	S	FE2/S2 (INORGANIC) CLUSTER	non-polymer		175.8	1	Chemie (FES)

Sequence modifications

c: 1 - 255 (UniProt: A0A2K3D422)
c: 255 - 276 (PDB: 7PKT)
c: 291 - 427 (UniProt: A0A2K3D422)
m: 2 - 27 (UniProt: A8JH49)
m: 28 - 184 (UniProt: A0A2K3DXS2)
s: 1 - 180 (UniProt: A0A2K3DJU3)
s: 191 - 319 (PDB: 7PKT)
u: -5 - 0 (PDB: 7PKT)
u: 1 - 167 (UniProt: A0A2K3E880)
J: 1 - 113 (UniProt: A8HPK3)
J: 116 - 136 (PDB: 7PKT)
M: 1 - 523 (UniProt: A0A2K3DVD3)
M: 530 - 903 (PDB: 7PKT)
O: 1 - 596 (UniProt: A8J070)
O: 600 - 691 (PDB: 7PKT)
Q: 1 - 340 (UniProt: A0A2K3CXJ4)
Q: 340 - 541 (PDB: 7PKT)
Q: 545 - 693 (UniProt: A0A2K3CXJ4)
Q: 705 - 831 (PDB: 7PKT)
R: 1 - 477 (UniProt: A0A2K3DTE5)
R: 493 - 684 (PDB: 7PKT)
S: 1 - 264 (UniProt: A0A2K3D424)

PDB	External Database	Details
Thr 257	Gly 257	conflict

S: 264 - 286 (PDB: 7PKT)
S: 295 - 334 (UniProt: A0A2K3D424)

Contents of the asymmetric unit

Polymers	Number of chains	54
	Total formula weight	1924462.8
Non-Polymers*	Number of molecules	71
	Total formula weight	1918.3
All*	Total formula weight	1926381.1

*Water molecules are not included.