5C7M
CRYSTAL STRUCTURE OF E3 LIGASE ITCH WITH A UB VARIANT
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | E3 ubiquitin-protein ligase Itchy homolog | polymer | 394 | 47028.7 | 1 | UniProt (Q96J02) Pfam (PF00632) In PDB | Homo sapiens (Human) | Itch,Atrophin-1-interacting protein 4,AIP4,NFE2-associated polypeptide 1,NAPP1 |
2 | B, C | Polyubiquitin-C | polymer | 84 | 9768.2 | 2 | UniProt (P0CG48) Pfam (PF00240) In PDB | Homo sapiens (Human) | |
3 | water | water | 18.0 | 3 | Chemie (HOH) |
Sequence modifications
A: 524 - 899 (UniProt: Q96J02)
B, C: 1 - 75 (UniProt: P0CG48)
PDB | External Database | Details |
---|---|---|
Met 506 | - | expression tag |
His 507 | - | expression tag |
His 508 | - | expression tag |
His 509 | - | expression tag |
His 510 | - | expression tag |
His 511 | - | expression tag |
His 512 | - | expression tag |
Ser 513 | - | expression tag |
Ser 514 | - | expression tag |
Gly 515 | - | expression tag |
Arg 516 | - | expression tag |
Glu 517 | - | expression tag |
Asn 518 | - | expression tag |
Leu 519 | - | expression tag |
Tyr 520 | - | expression tag |
Phe 521 | - | expression tag |
Gln 522 | - | expression tag |
Gly 523 | - | expression tag |
Ser 605 | Leu 605 | conflict |
Arg 801 | His 801 | conflict |
PDB | External Database | Details |
---|---|---|
His 2 | Gln 2 | engineered mutation |
Leu 4 | Phe 4 | engineered mutation |
Arg 9 | Thr 9 | engineered mutation |
Leu 44 | Ile 44 | engineered mutation |
Gly 46 | Ala 46 | engineered mutation |
Asn 48 | Lys 48 | engineered mutation |
Lys 49 | Gln 49 | engineered mutation |
Asn 66 | Thr 66 | engineered mutation |
Tyr 68 | His 68 | engineered mutation |
Leu 70 | Val 70 | engineered mutation |
Arg 73 | Leu 73 | engineered mutation |
Leu 74 | Arg 74 | engineered mutation |
Ser 76 | - | expression tag |
Lys 77 | - | expression tag |
Phe 78 | - | expression tag |
His 79 | - | expression tag |
His 80 | - | expression tag |
His 81 | - | expression tag |
His 82 | - | expression tag |
His 83 | - | expression tag |
His 84 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 66565.0 | |
All* | Total formula weight | 66565.0 |