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4WYC

Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a thiazole benzamide inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BAdenosylmethionine-8-amino-7-oxononanoate aminotransferasepolymer45748536.52UniProt (P9WQ81)
Pfam (PF00202)
In PDB
Mycobacterium tuberculosis7,8-diamino-pelargonic acid aminotransferase,DAPA aminotransferase,8-diaminononanoate synthase,DANS,Diaminopelargonic acid synthase
2A, BPYRIDOXAL-5'-PHOSPHATEnon-polymer247.12Chemie (PLP)
3A, B4-(1H-imidazol-1-yl)benzamidenon-polymer187.22Chemie (3VS)
4A, B1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
5AFORMYL GROUPnon-polymer30.01Chemie (FOR)
6ASULFATE IONnon-polymer96.11Chemie (SO4)
7BMAGNESIUM IONnon-polymer24.31Chemie (MG)
8waterwater18.0776Chemie (HOH)
Sequence modifications
A, B: 7 - 437 (UniProt: P9WQ81)
PDBExternal DatabaseDetails
Met -19-initiating methionine
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Met 1-expression tag
Ala 2-expression tag
Ala 3-expression tag
Ala 4-expression tag
Thr 5-expression tag
Gly 6-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight97073.0
Non-Polymers*Number of molecules9
Total formula weight1143.2
All*Total formula weight98216.3
*Water molecules are not included.

220113

PDB entries from 2024-05-22

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