4WYC
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a thiazole benzamide inhibitor
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | polymer | 457 | 48536.5 | 2 | UniProt (P9WQ81) Pfam (PF00202) In PDB | Mycobacterium tuberculosis | 7,8-diamino-pelargonic acid aminotransferase,DAPA aminotransferase,8-diaminononanoate synthase,DANS,Diaminopelargonic acid synthase |
2 | A, B | PYRIDOXAL-5'-PHOSPHATE | non-polymer | 247.1 | 2 | Chemie (PLP) | |||
3 | A, B | 4-(1H-imidazol-1-yl)benzamide | non-polymer | 187.2 | 2 | Chemie (3VS) | |||
4 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
5 | A | FORMYL GROUP | non-polymer | 30.0 | 1 | Chemie (FOR) | |||
6 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
7 | B | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
8 | water | water | 18.0 | 776 | Chemie (HOH) |
Sequence modifications
A, B: 7 - 437 (UniProt: P9WQ81)
PDB | External Database | Details |
---|---|---|
Met -19 | - | initiating methionine |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Met 1 | - | expression tag |
Ala 2 | - | expression tag |
Ala 3 | - | expression tag |
Ala 4 | - | expression tag |
Thr 5 | - | expression tag |
Gly 6 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 97073.0 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1143.2 | |
All* | Total formula weight | 98216.3 |