4KHW
Ternary complex of RB69 mutant L415F with ribonucleotide at -2 position
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA polymerase | polymer | 903 | 104689.2 | 1 | UniProt (Q38087) Pfam (PF03104) Pfam (PF00136) In PDB | Enterobacteria phage RB69 | Gp43 |
2 | T | DNA/RNA (5'-D(*AP*CP*AP*G)-R(P*G)-D(P*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') | polymer | 18 | 5566.6 | 1 | |||
3 | P | DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3') | polymer | 14 | 4256.8 | 1 | |||
4 | A | THYMIDINE-5'-TRIPHOSPHATE | non-polymer | 482.2 | 1 | Chemie (TTP) | |||
5 | A | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
6 | A | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
7 | water | water | 18.0 | 534 | Chemie (HOH) |
Sequence modifications
A: 1 - 903 (UniProt: Q38087)
PDB | External Database | Details |
---|---|---|
Ala 222 | Asp 222 | engineered mutation |
Ala 327 | Asp 327 | engineered mutation |
Phe 415 | Leu 415 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 114512.5 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 848.8 | |
All* | Total formula weight | 115361.3 |