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1YJW

Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1023S RIBOSOMAL RNApolymer2922946141.41GenBank (55229667)Haloarcula marismortui
2150S ribosomal protein L37epolymer576330.21UniProt (P32410)
Pfam (PF01907)
In PDB		Haloarcula marismortuiL35e
3250S ribosomal protein L39epolymer506133.11UniProt (P22452)
Pfam (PF00832)
In PDB		Haloarcula marismortuiHl39e,Hl46e
4350S ribosomal protein L44epolymer9210815.21UniProt (P32411)
Pfam (PF00935)
In PDB		Haloarcula marismortuiHLA,La
54QUINUPRISTINpolymer81024.21Streptomyces graminofaciens
695S RIBOSOMAL RNApolymer12239303.41GenBank (43619)Haloarcula marismortui
7A50S ribosomal protein L2polymer24025354.71UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Haloarcula marismortuiHl4,Hmal2
8B50S ribosomal protein L3polymer33837396.41UniProt (P20279)
Pfam (PF00297)
In PDB		Haloarcula marismortuiHl1,Hmal3
9C50S ribosomal protein L4polymer24626442.11UniProt (P12735)
Pfam (PF00573)
In PDB		Haloarcula marismortuiHl6,Hmal4
10D50S ribosomal protein L5polymer17719551.71UniProt (P14124)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Haloarcula marismortuiHl13,Hmal5
11E50S ribosomal protein L6polymer17819961.71UniProt (P14135)
Pfam (PF00347)
In PDB		Haloarcula marismortuiHl10,Hmal6
12F50S ribosomal protein L7Aepolymer12012791.91UniProt (P12743)
Pfam (PF01248)
In PDB		Haloarcula marismortuiHs6,Ribosomal protein L8e
13G50S ribosomal protein L10polymer34837213.81UniProt (P15825)
Pfam (PF00466)
Pfam (PF17777)
In PDB		Haloarcula marismortuiAcidic ribosomal protein P0 homolog,HMal10,L10E
14H50S ribosomal protein L10epolymer17719942.71UniProt (P60617)
Pfam (PF00252)
In PDB		Haloarcula marismortui
15I50S ribosomal protein L11polymer16217097.51UniProt (P14122)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Haloarcula marismortuiHmal11
16J50S ribosomal protein L13polymer14516249.21UniProt (P29198)
Pfam (PF00572)
In PDB		Haloarcula marismortuiHmal13
17K50S ribosomal protein L14polymer13214191.21UniProt (P22450)
Pfam (PF00238)
In PDB		Haloarcula marismortuiHl27,Hmal14
18L50S ribosomal protein L15polymer16518005.41UniProt (P12737)
Pfam (PF00828)
In PDB		Haloarcula marismortuiHl9,Hmal15
19M50S ribosomal protein L15epolymer19522275.11UniProt (P60618)
Pfam (PF00827)
In PDB		Haloarcula marismortui50S ribosomal protein LC12
20N50S ribosomal protein L18polymer18720640.91UniProt (P14123)
Pfam (PF17144)
In PDB		Haloarcula marismortuiHl12,Hmal18
21O50S ribosomal protein L18epolymer11612438.91UniProt (P12733)
Pfam (PF00828)
In PDB		Haloarcula marismortuiHl29,L19
22P50S ribosomal protein L19epolymer14916796.51UniProt (P14119)
Pfam (PF01280)
In PDB		Haloarcula marismortuiHl24,Hmal19
23Q50S ribosomal protein L21epolymer9610567.81UniProt (P12734)
Pfam (PF01157)
In PDB		Haloarcula marismortuiHl31
24R50S ribosomal protein L22polymer15516966.91UniProt (P10970)
Pfam (PF00237)
In PDB		Haloarcula marismortuiHl23,Hmal22
25S50S ribosomal protein L23polymer859612.51UniProt (P12732)
Pfam (PF00276)
In PDB		Haloarcula marismortuiHl25,Hmal23,L21
26T50S ribosomal protein L24polymer12013671.01UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Haloarcula marismortuiHl15,Hl16,Hmal24
27U50S ribosomal protein L24epolymer667233.71UniProt (P14116)
Pfam (PF01246)
In PDB		Haloarcula marismortuiHl21/Hl22
28V50S ribosomal protein L29polymer717889.91UniProt (P10971)
Pfam (PF00831)
In PDB		Haloarcula marismortuiHl33,Hmal29
29W50S ribosomal protein L30polymer15417062.91UniProt (P14121)
Pfam (PF00327)
In PDB		Haloarcula marismortuiHl16,Hl20,Hmal30
30X50S ribosomal protein L31epolymer9210384.61UniProt (P18138)
Pfam (PF01198)
In PDB		Haloarcula marismortuiHl30,L34
31Y50S ribosomal protein L32epolymer24126455.71UniProt (P12736)
Pfam (PF14520)
Pfam (PF01655)
In PDB		Haloarcula marismortuiHl5
32Z50S ribosomal protein L37Aepolymer839409.31UniProt (P60619)
Pfam (PF01780)
In PDB		Haloarcula marismortuiRibosomal protein L43e
330, A, Y, B, K...MAGNESIUM IONnon-polymer24.3117Chemie (MG)
340POTASSIUM IONnon-polymer39.12Chemie (K)
350, 9, A, C, H...SODIUM IONnon-polymer23.086Chemie (NA)
36Y, A, B, 0, J...CHLORIDE IONnon-polymer35.522Chemie (CL)
37U, Z, O, 1, 3CADMIUM IONnon-polymer112.45Chemie (CD)
38waterwater18.07810Chemie (HOH)
Sequence modifications
0: 1 - 2922 (GenBank: 55229667)
PDBExternal DatabaseDetails
A 2099G 2636308conflict
C: 1 - 246 (UniProt: P12735)
PDBExternal DatabaseDetails
Leu 73Gln 73conflict
G: 1 - 348 (UniProt: P15825)
PDBExternal DatabaseDetails
Asp 248Ala 248conflict
K: 1 - 132 (UniProt: P22450)
PDBExternal DatabaseDetails
Leu 44His 44conflict
M: 0 - 194 (UniProt: P60618)
PDBExternal DatabaseDetails
Glu 13Lys 14conflict
Z: 11 - 92 (UniProt: P60619)
PDBExternal DatabaseDetails
Arg 10-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains32
Total formula weight1475351.8
Non-Polymers*Number of molecules232
Total formula weight6241.0
All*Total formula weight1481592.8
*Water molecules are not included.

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PDB entries from 2024-04-24

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