Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8J2P
DownloadVisualize
BU of 8j2p by Molmil
Crystal structure of PML B-box2
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Protein PML, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhou, C, Zang, N, Zhang, J.
Deposit date:2023-04-15
Release date:2023-09-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Basis of PML-RARA Oncoprotein Targeting by Arsenic Unravels a Cysteine Rheostat Controlling PML Body Assembly and Function.
Cancer Discov, 13, 2023
8J25
DownloadVisualize
BU of 8j25 by Molmil
Crystal structure of PML B-box2 mutant
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Protein PML, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhou, C, Zang, N, Zhang, J.
Deposit date:2023-04-14
Release date:2023-09-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of PML-RARA Oncoprotein Targeting by Arsenic Unravels a Cysteine Rheostat Controlling PML Body Assembly and Function.
Cancer Discov, 13, 2023
4WJN
DownloadVisualize
BU of 4wjn by Molmil
Crystal structure of SUMO1 in complex with phosphorylated PML
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WJO
DownloadVisualize
BU of 4wjo by Molmil
Crystal Structure of SUMO1 in complex with PML
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
6IMQ
DownloadVisualize
BU of 6imq by Molmil
Crystal structure of PML B1-box multimers
Descriptor: CHLORIDE ION, Protein PML, ZINC ION
Authors:Li, Y, Ma, X, Chen, Z, Wu, H, Wang, P, Wu, W, Cheng, N, Zeng, L, Zhang, H, Cai, X, Chen, S.J, Chen, Z, Meng, G.
Deposit date:2018-10-23
Release date:2019-07-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:B1 oligomerization regulates PML nuclear body biogenesis and leukemogenesis.
Nat Commun, 10, 2019
8DJI
DownloadVisualize
BU of 8dji by Molmil
Ternary complex of SUMO1 with the SIM of PML and zinc
Descriptor: Protein PML, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
1BOR
DownloadVisualize
BU of 1bor by Molmil
TRANSCRIPTION FACTOR PML, A PROTO-ONCOPROTEIN, NMR, 1 REPRESENTATIVE STRUCTURE AT PH 7.5, 30 C, IN THE PRESENCE OF ZINC
Descriptor: TRANSCRIPTION FACTOR PML, ZINC ION
Authors:Borden, K.L.B, Freemont, P.S.
Deposit date:1995-09-27
Release date:1997-04-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the RING finger domain from the acute promyelocytic leukaemia proto-oncoprotein PML.
EMBO J., 14, 1995
5YUF
DownloadVisualize
BU of 5yuf by Molmil
Crystal Structure of PML RING tetramer
Descriptor: Protein PML, ZINC ION
Authors:Wang, P, Benhend, S, Wu, H, Breitenbach, V, Zhen, T, Jollivet, F, Peres, L, Li, Y, Chen, S, Chen, Z, de THE, H, Meng, G.
Deposit date:2017-11-22
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:RING tetramerization is required for nuclear body biogenesis and PML sumoylation.
Nat Commun, 9, 2018
6UYU
DownloadVisualize
BU of 6uyu by Molmil
Crystal structure of K45-acetylated SUMO1 in complex with phosphorylated PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYO
DownloadVisualize
BU of 6uyo by Molmil
Crystal structure of K37-acetylated SUMO1 in complex with PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYQ
DownloadVisualize
BU of 6uyq by Molmil
Crystal structure of K45-acetylated SUMO1 in complex with PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYR
DownloadVisualize
BU of 6uyr by Molmil
Crystal structure of K46-acetylated SUMO1 in complex with PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYP
DownloadVisualize
BU of 6uyp by Molmil
Crystal structure of K39-acetylated SUMO1 in complex with PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.418 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYT
DownloadVisualize
BU of 6uyt by Molmil
Crystal structure of K39-acetylated SUMO1 in complex with phosphorylated PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6UYV
DownloadVisualize
BU of 6uyv by Molmil
Crystal structure of K46-acetylated SUMO1 in complex with phosphorylated PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
8DJH
DownloadVisualize
BU of 8djh by Molmil
Ternary complex of SUMO1 with a phosphomimetic SIM of PML and zinc
Descriptor: PML 4SD, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
3ELV
DownloadVisualize
BU of 3elv by Molmil
Crystal Structure of Full-Length Yeast Pml1p
Descriptor: Pre-mRNA leakage protein 1, SULFATE ION
Authors:Trowitzsch, S, Weber, G, L hrmann, R, Wahl, M.C.
Deposit date:2008-09-23
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Pml1p subunit of the yeast precursor mRNA retention and splicing complex.
J.Mol.Biol., 385, 2009
3ELS
DownloadVisualize
BU of 3els by Molmil
Crystal Structure of Yeast Pml1p, Residues 51-204
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Trowitzsch, S, Weber, G, Luehrmann, R, Wahl, M.C.
Deposit date:2008-09-23
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Pml1p subunit of the yeast precursor mRNA retention and splicing complex.
J.Mol.Biol., 385, 2009
2JKD
DownloadVisualize
BU of 2jkd by Molmil
Structure of the yeast Pml1 splicing factor and its integration into the RES complex
Descriptor: GLYCEROL, PRE-MRNA LEAKAGE PROTEIN 1, SULFATE ION
Authors:Brooks, M.A, Dziembowski, A, Quevillon-Cheruel, S, Henriot, V, Faux, C, van Tilbeurgh, H, Seraphin, B.
Deposit date:2008-08-27
Release date:2008-09-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Yeast Pml1 Splicing Factor and its Integration Into the Res Complex
Nucleic Acids Res., 37, 2009
5YE2
DownloadVisualize
BU of 5ye2 by Molmil
mammalian endo-lysosomal TRPML1 channel inserting into amphipol
Descriptor: mammalian endo-lysosomal TRPML1 channel
Authors:Yang, M, Gao, N.
Deposit date:2017-09-15
Release date:2017-12-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Cryo-EM structures of the mammalian endo-lysosomal TRPML1 channel elucidate the combined regulation mechanism
Protein Cell, 8, 2017
5YDZ
DownloadVisualize
BU of 5ydz by Molmil
structure of endo-lysosomal TRPML1 channel inserting into amphipol: state 1
Descriptor: mammalian endo-lysosomal TRPML1 channel
Authors:Yang, M, Gao, N.
Deposit date:2017-09-15
Release date:2017-12-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Cryo-EM structures of the mammalian endo-lysosomal TRPML1 channel elucidate the combined regulation mechanism
Protein Cell, 8, 2017
5YE5
DownloadVisualize
BU of 5ye5 by Molmil
structure of endo-lysosomal TRPML1 channel inserting into nanodisc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, mammalian endo-lysosomal TRPML1 channel
Authors:Yang, M, Gao, N.
Deposit date:2017-09-15
Release date:2017-11-15
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Cryo-EM structures of the mammalian endo-lysosomal TRPML1 channel elucidate the combined regulation mechanism
Protein Cell, 8, 2017
2MWX
DownloadVisualize
BU of 2mwx by Molmil
The RING Domain of human Promyelocytic Leukemia Protein (PML)
Descriptor: Protein PML, ZINC ION
Authors:Huang, S.Y, Chang, C.F, Fan, P.J, Guntert, P, Shih, H.M, Huang, T.H.
Deposit date:2014-12-02
Release date:2015-02-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The RING domain of human promyelocytic leukemia protein (PML).
J.Biomol.Nmr, 61, 2015
6UYS
DownloadVisualize
BU of 6uys by Molmil
Crystal structure of K37-acetylated SUMO1 in complex with phosphorylated PML-SIM
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-11-14
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
6AYF
DownloadVisualize
BU of 6ayf by Molmil
TRPML3/ML-SA1 complex at pH 7.4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Mucolipin-3
Authors:Zhou, X, Li, M, Su, D, Jia, Q, Li, H, Li, X, Yang, J.
Deposit date:2017-09-08
Release date:2017-11-08
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states.
Nat. Struct. Mol. Biol., 24, 2017

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon