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10MH
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10mh
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET
Descriptor:CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX
Authors:Sheikhnejad, G., Brank, A., Christman, J.K., Goddard, A., Alvarez, E., Ford Junior, H., Marquez, V.E., Marasco, C.J., Sufrin, J.R., O'Gara, M., Cheng, X.
Deposit date:1998-08-10
Release date:1999-02-09
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.
J.Mol.Biol., 285, 1999
1DCT
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1dct
DNA (CYTOSINE-5) METHYLASE FROM HAEIII COVALENTLY BOUND TO DNA
Descriptor:MODIFICATION METHYLASE HAEIII (E.C.2.1.1.73)/DNA COMPLEX
Authors:Reinisch, K.M., Chen, L., Verdine, G.L., Lipscomb, W.N.
Deposit date:1995-05-17
Release date:1995-09-15
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of HaeIII methyltransferase convalently complexed to DNA: an extrahelical cytosine and rearranged base pairing.
Cell(Cambridge,Mass.), 82, 1995
1FJX
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1fjx
STRUCTURE OF TERNARY COMPLEX OF HHAI METHYLTRANSFERASE MUTANT (T250G) IN COMPLEX WITH DNA AND ADOHCY
Descriptor:HHAI METHYLTRANSFERASE MUTANT (T250G) (E.C. 2.1.1.73), DNA AND ADOHCY
Authors:Vilkaitis, G., Dong, A., Weinhold, E., Cheng, X., Klimasauskas, S.
Deposit date:2000-08-08
Release date:2000-12-15
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Functional roles of the conserved threonine 250 in the target recognition domain of HhaI DNA methyltransferase.
J.Biol.Chem., 275, 2000
1G55
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1g55
STRUCTURE OF HUMAN DNMT2, AN ENIGMATIC DNA METHYLTRANSFERASE HOMOLOGUE
Descriptor:DNA CYTOSINE METHYLTRANSFERASE DNMT2 (E.C.2.1.1.37)
Authors:Dong, A., Yoder, J.A., Zhang, X., Zhou, L., Bestor, T.H., Cheng, X.
Deposit date:2000-10-30
Release date:2001-01-17
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA.
Nucleic Acids Res., 29, 2001
1HMY
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1hmy
CRYSTAL STRUCTURE OF THE HHAI DNA METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYL-L-METHIONINE
Descriptor:HHAI DNA (CYTOSINE-C5-)-METHYLTRANSFERASE (E.C.2.1.1.37) COMPLEX WITH S-ADENOSYL-L-METHIONINE
Authors:Cheng, X.
Deposit date:1993-08-05
Release date:1993-10-31
Modification date:2012-02-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.
Cell(Cambridge,Mass.), 74, 1993
1M0E
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1m0e
ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASE
Descriptor:Modification methylase HhaI/DNA Complex
Authors:Zhou, L., Cheng, X., Connolly, B.A., Dickman, M.J., Hurd, P.J., Hornby, D.P.
Deposit date:2002-06-12
Release date:2002-09-18
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASES
J.MOL.BIOL., 321, 2002
1MHT
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1mht
COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DNA AND S-ADENOSYL-L-HOMOCYSTEINE
Descriptor:HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L- HOMOSYTEINE
Authors:Cheng, X.
Deposit date:1994-12-08
Release date:1995-06-03
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:HhaI methyltransferase flips its target base out of the DNA helix.
Cell(Cambridge,Mass.), 76, 1994
1SKM
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1skm
HHAI METHYLTRANSFERASE IN COMPLEX WITH DNA CONTAINING AN ABASIC SOUTH CARBOCYCLIC SUGAR AT ITS TARGET SITE
Descriptor:Modification methylase HhaI /5'-D(*TP*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3' /5'-D(*T*GP*TP*CP*AP*GP*(HCX)P*GP*CP*AP*TP*GP*G)-3'
Authors:Horton, J.R., Ratner, G., Banavali, N., Huang, N., Marquez, V.E., MacKerell, A.D., Cheng, X.
Deposit date:2004-03-05
Release date:2004-08-24
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
Nucleic Acids Res., 32, 2004
1SVU
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1svu
STRUCTURE OF THE Q237W MUTANT OF HHAI DNA METHYLTRANSFERASE: AN INSIGHT INTO PROTEIN-PROTEIN INTERACTIONS
Descriptor:Modification methylase HhaI (E.C.2.1.1.37)
Authors:Dong, A., Zhou, L., Zhang, X., Stickel, S., Roberts, R.J., Cheng, X.
Deposit date:2004-03-30
Release date:2004-06-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Biol.Chem., 385, 2004
2HMY
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2hmy
BINARY COMPLEX OF HHAI METHYLTRANSFERASE WITH ADOMET FORMED IN THE PRESENCE OF A SHORT NONPSECIFIC DNA OLIGONUCLEOTIDE
Descriptor:CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI
Authors:O'Gara, M., Zhang, X., Roberts, R.J., Cheng, X.
Deposit date:1999-02-08
Release date:1999-03-19
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure of a binary complex of HhaI methyltransferase with S-adenosyl-L-methionine formed in the presence of a short non-specific DNA oligonucleotide.
J.Mol.Biol., 287, 1999
2HR1
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2hr1
TERNARY STRUCTURE OF WT M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Transferase/DNA Complex
Authors:Shieh, F.
Deposit date:2006-07-19
Release date:2006-09-19
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The Role of Arg165 Towards Base Flipping, Base Stabilization and Catalysis in M.HhaI.
J.Mol.Biol., 362, 2006
2I9K
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2i9k
ENGINEERED EXTRAHELICAL BASE DESTABILIZATION ENHANCES SEQUENCE DISCRIMINATION OF DNA METHYLTRANSFERASE M.HHAI
Descriptor:Modification methylase HhaI/DNA Complex, S-Adenosyl-L-Homocysteine
Authors:Youngblood, B., Shieh, F.K., De Los Rios, S., Perona, J.J., Reich, N.O.
Deposit date:2006-09-05
Release date:2006-10-10
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination of DNA Methyltransferase M.HhaI
J.Mol.Biol., 362, 2006
2Z6A
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2z6a
S-ADENOSYL-L-METHIONINE-DEPENDENT METHYL TRANSFER: OBSERVABLE PRECATALYTIC INTERMEDIATES DURING DNA CYTOSINE METHYLATION
Descriptor:Transferase(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-07-25
Release date:2007-08-21
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:S-Adenosyl-l-methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates during DNA Cytosine Methylation
Biochemistry, 46, 2007
2Z6Q
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2z6q
TERNARY STRUCTURE OF ARG165ALA M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Modification methylase HhaI(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-08-08
Release date:2007-08-28
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:The role of Arg165 towards base flipping, base stabilization and catalysis in M.HhaI
J.Mol.Biol., 362, 2006
2Z6U
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2z6u
TERNARY STRUCTURE OF THE GLU119ALA M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Transferase(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K.
Deposit date:2007-08-09
Release date:2007-11-20
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:AdoMet-dependent Methyl-transfer: Glu(119) Is Essential for DNA C5-Cytosine Methyltransferase M.HhaI
J.Mol.Biol., 373, 2007
2ZCJ
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2zcj
TERNARY STRUCTURE OF THE GLU119GLN M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY
Descriptor:Modification methylase HhaI(E.C.2.1.1.37)/DNA Complex
Authors:Shieh, F.K., Reich, N.O.
Deposit date:2007-11-09
Release date:2007-12-04
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:AdoMet-dependent Methyl-transfer: Glu(119) Is Essential for DNA C5-Cytosine Methyltransferase M.HhaI
J.Mol.Biol., 373, 2007
3EEO
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3eeo
M. HHAI CO-CRYSTALLIZED WITH SYNTHETIC DSDNA CONTAINING A PROPANE DIOL IN PLACE OF THE DEOXYCYTIDINE RESIDUE TARGETED FOR METHYLATION.
Descriptor:Modification methylase HhaI (E.C.2.1.1.37)/DNA Complex
Authors:Porta, J.C., Christman, J.K., Borgstahl, G.E.O.
Deposit date:2008-09-05
Release date:2010-03-02
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:M. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.
To be Published
3G7U
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3g7u
CRYSTAL STRUCTURE OF PUTATIVE DNA MODIFICATION METHYLTRANSFERASE ENCODED WITHIN PROPHAGE CP-933R (E.COLI)
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Patskovsky, Y., Ramagopal, U.A., Toro, R., Gilmore, M., Iizuka, M., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-10
Release date:2009-02-24
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of DNA Modification Methyltransferase Encoded within Prophage Cp-933R (E.coli)
To be Published
3LX6
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3lx6
CRYSTAL STRUCTURE OF PUTATIVE DNA CYTOSINE METHYLASE FROM SHIGELLA FLEXNERI 2A STR. 2457T
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-24
Release date:2010-03-23
Modification date:2012-05-23
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3ME5
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3me5
CRYSTAL STRUCTURE OF PUTATIVE DNA CYTOSINE METHYLASE FROM SHIGELLA FLEXNERI 2A STR. 2457T
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Ramagopal, U.A., Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-31
Release date:2010-04-21
Modification date:2012-05-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3MHT
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3mht
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Descriptor:URACIL-DNA GLYCOSYLASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L-HOMOCYSTEINE
Authors:O'Gara, M., Klimasauskas, S., Roberts, R.J., Cheng, X.
Deposit date:1996-07-24
Release date:1997-01-27
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes.
J.Mol.Biol., 261, 1996
3QV2
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3qv2
STRUCTURE ANALYSIS OF ENTAMOEBA HISTOLYTICA METHYLTRANSFERASE EHMETH
Descriptor:5-cytosine DNA methyltransferase (E.C.2.1.1.37)
Authors:Schulz, E.C., Roth, H.M., Ankri, S., Ficner, R.
Deposit date:2011-02-25
Release date:2012-04-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure Analysis of Entamoeba histolytica Methyltransferase
To be Published
4DKJ
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4dkj
CPG SPECIFIC METHYLTRANSFERASE IN COMPLEX WITH TARGET DNA
Descriptor:Cytosine-specific methyltransferase (E.C.2.1.1.37)
Authors:Wojciechowski, M., Czapinska, H., Bochtler, M.
Deposit date:2012-02-03
Release date:2012-12-05
Modification date:2013-01-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:CpG underrepresentation and the bacterial CpG-specific DNA methyltransferase M.MpeI.
Proc.Natl.Acad.Sci.USA, 110, 2013
4H0N
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4h0n
CRYSTAL STRUCTURE OF SPODOPTERA FRUGIPERDA DNMT2 E260A/E261A/K263A MUTANT
Descriptor:DNMT2 (E.C.2.1.1.-)
Authors:Li, S., Du, J., Yang, H., Yin, J., Zhong, J., Ding, J.
Deposit date:2012-09-09
Release date:2012-11-14
Modification date:2013-02-27
Method:X-RAY DIFFRACTION (2.712 Å)
Cite:Functional and structural characterization of DNMT2 from Spodoptera frugiperda.
J Mol Cell Biol, 5, 2013
4MHT
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4mht
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH NATIVE DNA AND ADOHCY
Descriptor:HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA COMPLEX + S-ADENOSYL-L-HOMOSYTEINE
Authors:Cheng, X.
Deposit date:1996-07-24
Release date:1997-01-27
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes.
J.Mol.Biol., 261, 1996
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