PDB: 19 件ウェブページステータス検索Chemie searchBIRD

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5VYM	Crystal structure of beta-galactosidase from Bifidobacterium adolescentis 分子名称: Beta-galactosidase BgaB 著者 Chang, C, Cuff, M, Tesar, C, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2017-05-25 公開日 2017-08-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.456 Å) 主引用文献 Crystal structure of beta-galactosidase from Bifidobacterium adolescentis To Be Published
7OMI	Bs164 in complex with mannocyclophellitol epoxide 分子名称: (1R,2S,4S,5R)-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol, 1,2-ETHANEDIOL, CHLORIDE ION, ... 著者 Armstrong, Z, Mcgregor, N, Davies, G. 登録日 2021-05-24 公開日 2022-02-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases. Org.Biomol.Chem., 20, 2022
7OMS	Bs164 in complex with mannocyclophellitol aziridine 分子名称: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, CHLORIDE ION, ... 著者 McGregor, N, Beenakker, T, Kuo, C.L, Wong, C.S, Offren, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H, Davies, G.J. 登録日 2021-05-24 公開日 2022-02-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases. Org.Biomol.Chem., 20, 2022
6T6G	Bacteroides salyersiae GH164 beta-mannosidase in complex with noeuromycin 分子名称: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, 1,2-ETHANEDIOL, CHLORIDE ION, ... 著者 Armstrong, Z, Davies, G. 登録日 2019-10-18 公開日 2020-01-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Structure and function ofBs164 beta-mannosidase fromBacteroides salyersiaethe founding member of glycoside hydrolase family GH164. J.Biol.Chem., 295, 2020
6T75	Bacteroides salyersiae GH164 beta-mannosidase 2-deoxy-2-fluoro-beta-D-mannosyl enzyme intermediate 分子名称: 2-deoxy-2-fluoro-alpha-D-mannopyranose, CHLORIDE ION, Glyco_hydro_42M domain-containing protein 著者 Armstrong, Z, Davies, G. 登録日 2019-10-21 公開日 2020-01-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structure and function ofBs164 beta-mannosidase fromBacteroides salyersiaethe founding member of glycoside hydrolase family GH164. J.Biol.Chem., 295, 2020
6T5O	Bacteroides salyersiae GH164 beta-mannosidase 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D(-)-TARTARIC ACID, ... 著者 Armstrong, Z, Davies, G. 登録日 2019-10-16 公開日 2020-01-01 最終更新日 2020-04-08 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Structure and function ofBs164 beta-mannosidase fromBacteroides salyersiaethe founding member of glycoside hydrolase family GH164. J.Biol.Chem., 295, 2020
6T7G	Bacteroides salyersiae GH164 beta-mannosidase in complex with mannoimidazole 分子名称: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ... 著者 Armstrong, Z, Davies, G. 登録日 2019-10-21 公開日 2019-12-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure and function ofBs164 beta-mannosidase fromBacteroides salyersiaethe founding member of glycoside hydrolase family GH164. J.Biol.Chem., 295, 2020
6TVK	Alpha-L-fucosidase isoenzyme 2 from Paenibacillus thiaminolyticus 分子名称: Alpha-L-fucosidase, GLYCEROL, HEXATANTALUM DODECABROMIDE, ... 著者 Kovalova, T, Koval, T, Lipovova, P, Dohnalek, J. 登録日 2020-01-09 公開日 2021-07-21 最終更新日 2022-05-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The first structure-function study of GH151 alpha-l-fucosidase uncovers new oligomerization pattern, active site complementation, and selective substrate specificity Febs J., 2022
5XB7	GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 分子名称: Beta-galactosidase, GLYCEROL, SULFATE ION 著者 Viborg, A.H, Katayama, T, Arakawa, T, Abou Hachem, M, Lo Leggio, L, Kitaoka, M, Svensson, B, Fushinobu, S. 登録日 2017-03-16 公開日 2017-11-01 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of alpha-l-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42. J. Biol. Chem., 292, 2017
4OIF	3D structure of Gan42B, a GH42 beta-galactosidase from G. 分子名称: Beta-galactosidase, GLYCEROL, ZINC ION 著者 Solomon, H.V, Tabachnikov, O, Feinberg, H, Shoham, Y, Shoham, G. 登録日 2014-01-19 公開日 2015-02-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.448 Å) 主引用文献 Crystallization and preliminary crystallographic analysis of GanB, a GH42 intracellular beta-galactosidase from Geobacillus stearothermophilus. Acta Crystallogr.,Sect.F, 69, 2013
6JOW	Exo-beta-D-glucosaminidase from Pyrococcus furiosus 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-galactosidase, CALCIUM ION 著者 Mine, S, Watanabe, M. 登録日 2019-03-24 公開日 2020-03-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Exo-beta-D-glucosaminidase from Pyrococcus furiosus To Be Published
5DFA	3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus 分子名称: Beta-galactosidase, GLYCEROL, ZINC ION 著者 Solomon, H.V, Tabachnikov, O, Lansky, S, Feinberg, H, Govada, L, Chayen, N.E, Shoham, Y, Shoham, G. 登録日 2015-08-26 公開日 2015-12-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure-function relationships in Gan42B, an intracellular GH42 beta-galactosidase from Geobacillus stearothermophilus. Acta Crystallogr.,Sect.D, 71, 2015
5E9A	Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 分子名称: ACETATE ION, Beta-galactosidase, ZINC ION 著者 Zhang, Y.Z, Fan, Y.T. 登録日 2015-10-14 公開日 2016-10-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.561 Å) 主引用文献 Cloning, expression and structural stability of a cold-adapted beta-galactosidase from Rahnella sp. R3. Protein Expr.Purif., 115, 2015
1KWK	Crystal structure of Thermus thermophilus A4 beta-galactosidase in complex with galactose 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, BETA-GALACTOSIDASE, ... 著者 Hidaka, M, Fushinobu, S, Ohtsu, N, Motoshima, H, Matsuzawa, H, Shoun, H, Wakagi, T. 登録日 2002-01-29 公開日 2002-10-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Trimeric crystal structure of the glycoside hydrolase family 42 beta-galactosidase from Thermus thermophilus A4 and the structure of its complex with galactose. J.Mol.Biol., 322, 2002
1KWG	Crystal structure of Thermus thermophilus A4 beta-galactosidase 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, BETA-GALACTOSIDASE, ... 著者 Hidaka, M, Fushinobu, S, Ohtsu, N, Motoshima, H, Matsuzawa, H, Shoun, H, Wakagi, T. 登録日 2002-01-29 公開日 2002-09-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Trimeric Crystal Structure of the Glycoside Hydrolase Family 42 beta-Galactosidase from Thermus thermophilus A4 and the Structure of its Complex with Galactose J.MOL.BIOL., 322, 2002
6LVW	Polyextremophilic Beta-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi 分子名称: Beta-galactosidase Bga, MAGNESIUM ION, ZINC ION 著者 Muhammad, R, Arold, S.T. 登録日 2020-02-06 公開日 2020-10-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.493 Å) 主引用文献 Understanding High-Salt and Cold Adaptation of a Polyextremophilic Enzyme. Microorganisms, 8, 2020
8IBS	Crystal structure of GH42 beta-galactosidase BiBga42A from Bifidobacterium longum subspecies infantis E160A/E318A mutant in complex with galactose 分子名称: Beta-galactosidase, alpha-D-galactopyranose 著者 Hidaka, M, Fushinobu, S, Gotoh, A, Katayama, T. 登録日 2023-02-10 公開日 2023-06-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Substrate recognition mode of a glycoside hydrolase family 42 beta-galactosidase from Bifidobacterium longum subspecies infantis ( Bi Bga42A) revealed by crystallographic and mutational analyses. Microbiome Res Rep, 2, 2023
8IBT	Crystal structure of GH42 beta-galactosidase BiBga42A from Bifidobacterium longum subspecies infantis E318S mutant in complex with lacto-N-tetraose 分子名称: Beta-galactosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Hidaka, M, Fushinobu, S, Gotoh, A, Katayama, T. 登録日 2023-02-10 公開日 2023-06-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Substrate recognition mode of a glycoside hydrolase family 42 beta-galactosidase from Bifidobacterium longum subspecies infantis ( Bi Bga42A) revealed by crystallographic and mutational analyses. Microbiome Res Rep, 2, 2023
8IBR	Crystal structure of GH42 beta-galactosidase BiBga42A from Bifidobacterium longum subspecies infantis in complex with glycerol 分子名称: Beta-galactosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL 著者 Hidaka, M, Fushinobu, S, Gotoh, A, Katayama, T. 登録日 2023-02-10 公開日 2023-06-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Substrate recognition mode of a glycoside hydrolase family 42 beta-galactosidase from Bifidobacterium longum subspecies infantis ( Bi Bga42A) revealed by crystallographic and mutational analyses. Microbiome Res Rep, 2, 2023