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8R2I

Cryo-EM Structure of native Photosystem II assembly intermediate from Chlamydomonas reinhardtii

Functional Information from GO Data
ChainGOidnamespacecontents
10009507cellular_componentchloroplast
10009523cellular_componentphotosystem II
10009535cellular_componentchloroplast thylakoid membrane
10009579cellular_componentthylakoid
10015979biological_processphotosynthesis
10016020cellular_componentmembrane
A0005506molecular_functioniron ion binding
A0009055molecular_functionelectron transfer activity
A0009507cellular_componentchloroplast
A0009523cellular_componentphotosystem II
A0009535cellular_componentchloroplast thylakoid membrane
A0009579cellular_componentthylakoid
A0009635biological_processresponse to herbicide
A0010242molecular_functionoxygen evolving activity
A0015979biological_processphotosynthesis
A0016020cellular_componentmembrane
A0016168molecular_functionchlorophyll binding
A0016491molecular_functionoxidoreductase activity
A0016682molecular_functionoxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
A0046872molecular_functionmetal ion binding
B0009507cellular_componentchloroplast
B0009523cellular_componentphotosystem II
B0009535cellular_componentchloroplast thylakoid membrane
B0009579cellular_componentthylakoid
B0015979biological_processphotosynthesis
B0016020cellular_componentmembrane
B0016168molecular_functionchlorophyll binding
C0005737cellular_componentcytoplasm
C0009507cellular_componentchloroplast
C0009523cellular_componentphotosystem II
C0009535cellular_componentchloroplast thylakoid membrane
C0009579cellular_componentthylakoid
C0015979biological_processphotosynthesis
C0016020cellular_componentmembrane
C0016168molecular_functionchlorophyll binding
C0043229cellular_componentintracellular organelle
C0046872molecular_functionmetal ion binding
D0005506molecular_functioniron ion binding
D0009055molecular_functionelectron transfer activity
D0009507cellular_componentchloroplast
D0009523cellular_componentphotosystem II
D0009535cellular_componentchloroplast thylakoid membrane
D0009579cellular_componentthylakoid
D0010242molecular_functionoxygen evolving activity
D0015979biological_processphotosynthesis
D0016020cellular_componentmembrane
D0016168molecular_functionchlorophyll binding
D0016491molecular_functionoxidoreductase activity
D0046872molecular_functionmetal ion binding
E0005506molecular_functioniron ion binding
E0009055molecular_functionelectron transfer activity
E0009507cellular_componentchloroplast
E0009523cellular_componentphotosystem II
E0009535cellular_componentchloroplast thylakoid membrane
E0009536cellular_componentplastid
E0009579cellular_componentthylakoid
E0015979biological_processphotosynthesis
E0016020cellular_componentmembrane
E0046872molecular_functionmetal ion binding
Functional Information from PROSITE/UniProt
site_idPS00244
Number of Residues27
DetailsREACTION_CENTER Photosynthetic reaction center proteins signature. NilmhPfHmlGvagvfggslfsAmHGS
ChainResidueDetails
AASN191-SER217
DASN190-ALA216

site_idPS00537
Number of Residues15
DetailsCYTOCHROME_B559 Cytochrome b559 subunits heme-binding site signature. LtSIRYwvIHSITVP
ChainResidueDetails
ELEU14-PRO28
FILE14-PRO28

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues20
DetailsTRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_00441
ChainResidueDetails
DGLY124-PRO140
DVAL152-SER165
DALA207-ASP227
DGLY278-ARG294
BCYS457-ARG472
KPHE18-VAL38

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_00643
ChainResidueDetails
DHIS197
FHIS23

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01383
ChainResidueDetails
DASN142
DHIS214
DPHE261
DHIS268
AHIS272
AHIS332
AGLU333
DGLN129

site_idSWS_FT_FI4
Number of Residues1
DetailsSITE: Tyrosine radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379
ChainResidueDetails
ATYR161

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Stabilizes free radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379
ChainResidueDetails
AHIS190

219869

PDB entries from 2024-05-15

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