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8ISI

Photochromobilin-free form of Arabidopsis thaliana phytochrome A - apo-AtphyA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000155molecular_functionphosphorelay sensor kinase activity
A0000160biological_processphosphorelay signal transduction system
A0003729molecular_functionmRNA binding
A0004672molecular_functionprotein kinase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0006355biological_processregulation of DNA-templated transcription
A0007165biological_processsignal transduction
A0009409biological_processresponse to cold
A0009584biological_processdetection of visible light
A0009585biological_processred, far-red light phototransduction
A0009630biological_processgravitropism
A0009638biological_processphototropism
A0009640biological_processphotomorphogenesis
A0009881molecular_functionphotoreceptor activity
A0009883molecular_functionred or far-red light photoreceptor activity
A0010018biological_processfar-red light signaling pathway
A0010161biological_processred light signaling pathway
A0010201biological_processresponse to continuous far red light stimulus by the high-irradiance response system
A0010203biological_processresponse to very low fluence red light stimulus
A0010218biological_processresponse to far red light
A0016301molecular_functionkinase activity
A0016604cellular_componentnuclear body
A0016607cellular_componentnuclear speck
A0017006biological_processprotein-tetrapyrrole linkage
A0017148biological_processnegative regulation of translation
A0031516molecular_functionfar-red light photoreceptor activity
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0043231cellular_componentintracellular membrane-bounded organelle
A0046685biological_processresponse to arsenic-containing substance
B0000155molecular_functionphosphorelay sensor kinase activity
B0000160biological_processphosphorelay signal transduction system
B0003729molecular_functionmRNA binding
B0004672molecular_functionprotein kinase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0006355biological_processregulation of DNA-templated transcription
B0007165biological_processsignal transduction
B0009409biological_processresponse to cold
B0009584biological_processdetection of visible light
B0009585biological_processred, far-red light phototransduction
B0009630biological_processgravitropism
B0009638biological_processphototropism
B0009640biological_processphotomorphogenesis
B0009881molecular_functionphotoreceptor activity
B0009883molecular_functionred or far-red light photoreceptor activity
B0010018biological_processfar-red light signaling pathway
B0010161biological_processred light signaling pathway
B0010201biological_processresponse to continuous far red light stimulus by the high-irradiance response system
B0010203biological_processresponse to very low fluence red light stimulus
B0010218biological_processresponse to far red light
B0016301molecular_functionkinase activity
B0016604cellular_componentnuclear body
B0016607cellular_componentnuclear speck
B0017006biological_processprotein-tetrapyrrole linkage
B0017148biological_processnegative regulation of translation
B0031516molecular_functionfar-red light photoreceptor activity
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0043231cellular_componentintracellular membrane-bounded organelle
B0046685biological_processresponse to arsenic-containing substance
Functional Information from PROSITE/UniProt
site_idPS00245
Number of Residues10
DetailsPHYTOCHROME_1 Phytochrome chromophore attachment site signature. RAPHsCHlqY
ChainResidueDetails
AARG318-TYR327

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. ILAVdsDgLVNGWNT
ChainResidueDetails
AILE633-THR647

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: covalent => ECO:0000250
ChainResidueDetails
ACYS323
BCYS323

220113

PDB entries from 2024-05-22

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