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8FKR

Human nucleolar pre-60S ribosomal subunit (State B1)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
BA0002181biological_processcytoplasmic translation
BA0003723molecular_functionRNA binding
BA0003735molecular_functionstructural constituent of ribosome
BA0005515molecular_functionprotein binding
BA0005634cellular_componentnucleus
BA0005730cellular_componentnucleolus
BA0005737cellular_componentcytoplasm
BA0005829cellular_componentcytosol
BA0005840cellular_componentribosome
BA0005925cellular_componentfocal adhesion
BA0006412biological_processtranslation
BA0014069cellular_componentpostsynaptic density
BA0016020cellular_componentmembrane
BA0022625cellular_componentcytosolic large ribosomal subunit
BA0022626cellular_componentcytosolic ribosome
BA0045202cellular_componentsynapse
BA0070062cellular_componentextracellular exosome
BA0070180molecular_functionlarge ribosomal subunit rRNA binding
BA1990904cellular_componentribonucleoprotein complex
L60001824biological_processblastocyst development
L60002181biological_processcytoplasmic translation
L60003723molecular_functionRNA binding
L60003735molecular_functionstructural constituent of ribosome
L60005515molecular_functionprotein binding
L60005634cellular_componentnucleus
L60005730cellular_componentnucleolus
L60005737cellular_componentcytoplasm
L60005783cellular_componentendoplasmic reticulum
L60005829cellular_componentcytosol
L60005840cellular_componentribosome
L60006412biological_processtranslation
L60016020cellular_componentmembrane
L60022625cellular_componentcytosolic large ribosomal subunit
L60022626cellular_componentcytosolic ribosome
L60045202cellular_componentsynapse
L60060348biological_processbone development
L61990904cellular_componentribonucleoprotein complex
L70002181biological_processcytoplasmic translation
L70003723molecular_functionRNA binding
L70003729molecular_functionmRNA binding
L70003735molecular_functionstructural constituent of ribosome
L70005634cellular_componentnucleus
L70005730cellular_componentnucleolus
L70005737cellular_componentcytoplasm
L70005829cellular_componentcytosol
L70005840cellular_componentribosome
L70005925cellular_componentfocal adhesion
L70006412biological_processtranslation
L70006417biological_processregulation of translation
L70015934cellular_componentlarge ribosomal subunit
L70016020cellular_componentmembrane
L70017148biological_processnegative regulation of translation
L70022625cellular_componentcytosolic large ribosomal subunit
L70022626cellular_componentcytosolic ribosome
L70032496biological_processresponse to lipopolysaccharide
L70042592biological_processhomeostatic process
L70045202cellular_componentsynapse
L70048246biological_processmacrophage chemotaxis
L70060425biological_processlung morphogenesis
L70071346biological_processcellular response to type II interferon
L70097452cellular_componentGAIT complex
L71901194biological_processnegative regulation of formation of translation preinitiation complex
L71990904cellular_componentribonucleoprotein complex
L80002181biological_processcytoplasmic translation
L80003723molecular_functionRNA binding
L80003735molecular_functionstructural constituent of ribosome
L80005515molecular_functionprotein binding
L80005737cellular_componentcytoplasm
L80005829cellular_componentcytosol
L80005840cellular_componentribosome
L80006364biological_processrRNA processing
L80006412biological_processtranslation
L80014069cellular_componentpostsynaptic density
L80016020cellular_componentmembrane
L80022625cellular_componentcytosolic large ribosomal subunit
L80022626cellular_componentcytosolic ribosome
L80042273biological_processribosomal large subunit biogenesis
L80045202cellular_componentsynapse
L80045296molecular_functioncadherin binding
L80070062cellular_componentextracellular exosome
L81990904cellular_componentribonucleoprotein complex
L90002181biological_processcytoplasmic translation
L90003723molecular_functionRNA binding
L90003735molecular_functionstructural constituent of ribosome
L90005515molecular_functionprotein binding
L90005634cellular_componentnucleus
L90005737cellular_componentcytoplasm
L90005829cellular_componentcytosol
L90005840cellular_componentribosome
L90006412biological_processtranslation
L90022625cellular_componentcytosolic large ribosomal subunit
L90022626cellular_componentcytosolic ribosome
L90031672cellular_componentA band
L90045202cellular_componentsynapse
L90045296molecular_functioncadherin binding
L90045471biological_processresponse to ethanol
L91990904cellular_componentribonucleoprotein complex
LA0002181biological_processcytoplasmic translation
LA0003723molecular_functionRNA binding
LA0003735molecular_functionstructural constituent of ribosome
LA0005515molecular_functionprotein binding
LA0005634cellular_componentnucleus
LA0005737cellular_componentcytoplasm
LA0005829cellular_componentcytosol
LA0005840cellular_componentribosome
LA0006412biological_processtranslation
LA0015934cellular_componentlarge ribosomal subunit
LA0022625cellular_componentcytosolic large ribosomal subunit
LA0022626cellular_componentcytosolic ribosome
LA1990904cellular_componentribonucleoprotein complex
LB0002181biological_processcytoplasmic translation
LB0003723molecular_functionRNA binding
LB0003735molecular_functionstructural constituent of ribosome
LB0005515molecular_functionprotein binding
LB0005634cellular_componentnucleus
LB0005730cellular_componentnucleolus
LB0005737cellular_componentcytoplasm
LB0005783cellular_componentendoplasmic reticulum
LB0005791cellular_componentrough endoplasmic reticulum
LB0005829cellular_componentcytosol
LB0005840cellular_componentribosome
LB0005925cellular_componentfocal adhesion
LB0006412biological_processtranslation
LB0016020cellular_componentmembrane
LB0022625cellular_componentcytosolic large ribosomal subunit
LB0022626cellular_componentcytosolic ribosome
LB0043232cellular_componentintracellular non-membrane-bounded organelle
LB1990904cellular_componentribonucleoprotein complex
LC0002181biological_processcytoplasmic translation
LC0003723molecular_functionRNA binding
LC0003735molecular_functionstructural constituent of ribosome
LC0005515molecular_functionprotein binding
LC0005737cellular_componentcytoplasm
LC0005829cellular_componentcytosol
LC0005840cellular_componentribosome
LC0006412biological_processtranslation
LC0016020cellular_componentmembrane
LC0022625cellular_componentcytosolic large ribosomal subunit
LC0022626cellular_componentcytosolic ribosome
LC1990904cellular_componentribonucleoprotein complex
LE0002181biological_processcytoplasmic translation
LE0003723molecular_functionRNA binding
LE0003735molecular_functionstructural constituent of ribosome
LE0005515molecular_functionprotein binding
LE0005737cellular_componentcytoplasm
LE0005783cellular_componentendoplasmic reticulum
LE0005829cellular_componentcytosol
LE0005840cellular_componentribosome
LE0006412biological_processtranslation
LE0016020cellular_componentmembrane
LE0022625cellular_componentcytosolic large ribosomal subunit
LE0022626cellular_componentcytosolic ribosome
LE0045202cellular_componentsynapse
LE1990904cellular_componentribonucleoprotein complex
LG0000122biological_processnegative regulation of transcription by RNA polymerase II
LG0001223molecular_functiontranscription coactivator binding
LG0002181biological_processcytoplasmic translation
LG0003723molecular_functionRNA binding
LG0003735molecular_functionstructural constituent of ribosome
LG0005515molecular_functionprotein binding
LG0005654cellular_componentnucleoplasm
LG0005730cellular_componentnucleolus
LG0005737cellular_componentcytoplasm
LG0005829cellular_componentcytosol
LG0005840cellular_componentribosome
LG0005925cellular_componentfocal adhesion
LG0006412biological_processtranslation
LG0006610biological_processribosomal protein import into nucleus
LG0008284biological_processpositive regulation of cell population proliferation
LG0010628biological_processpositive regulation of gene expression
LG0016020cellular_componentmembrane
LG0022625cellular_componentcytosolic large ribosomal subunit
LG0022626cellular_componentcytosolic ribosome
LG0031625molecular_functionubiquitin protein ligase binding
LG0032986biological_processprotein-DNA complex disassembly
LG0032991cellular_componentprotein-containing complex
LG0045202cellular_componentsynapse
LG0050821biological_processprotein stabilization
LG0070062cellular_componentextracellular exosome
LG0070180molecular_functionlarge ribosomal subunit rRNA binding
LG0070314biological_processG1 to G0 transition
LG0072717biological_processcellular response to actinomycin D
LG1901798biological_processpositive regulation of signal transduction by p53 class mediator
LG1903450biological_processregulation of G1 to G0 transition
LG1904667biological_processnegative regulation of ubiquitin protein ligase activity
LG1990904cellular_componentribonucleoprotein complex
LG1990948molecular_functionubiquitin ligase inhibitor activity
LG2000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
LH0002181biological_processcytoplasmic translation
LH0003723molecular_functionRNA binding
LH0003735molecular_functionstructural constituent of ribosome
LH0005515molecular_functionprotein binding
LH0005634cellular_componentnucleus
LH0005730cellular_componentnucleolus
LH0005737cellular_componentcytoplasm
LH0005829cellular_componentcytosol
LH0005840cellular_componentribosome
LH0006412biological_processtranslation
LH0019843molecular_functionrRNA binding
LH0022625cellular_componentcytosolic large ribosomal subunit
LH0022626cellular_componentcytosolic ribosome
LH0045296molecular_functioncadherin binding
LH0070062cellular_componentextracellular exosome
LH1904841molecular_functionTORC2 complex binding
LH1990904cellular_componentribonucleoprotein complex
LI0002181biological_processcytoplasmic translation
LI0003723molecular_functionRNA binding
LI0003735molecular_functionstructural constituent of ribosome
LI0005515molecular_functionprotein binding
LI0005654cellular_componentnucleoplasm
LI0005730cellular_componentnucleolus
LI0005737cellular_componentcytoplasm
LI0005829cellular_componentcytosol
LI0005840cellular_componentribosome
LI0006364biological_processrRNA processing
LI0006412biological_processtranslation
LI0006977biological_processDNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
LI0015934cellular_componentlarge ribosomal subunit
LI0016020cellular_componentmembrane
LI0022625cellular_componentcytosolic large ribosomal subunit
LI0022626cellular_componentcytosolic ribosome
LI0034644biological_processcellular response to UV
LI0042273biological_processribosomal large subunit biogenesis
LI0045202cellular_componentsynapse
LI0045727biological_processpositive regulation of translation
LI0048027molecular_functionmRNA 5'-UTR binding
LI0070062cellular_componentextracellular exosome
LI0071479biological_processcellular response to ionizing radiation
LI0071480biological_processcellular response to gamma radiation
LI1902164biological_processpositive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
LI1902167biological_processpositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
LI1904803biological_processregulation of translation involved in cellular response to UV
LI1990904cellular_componentribonucleoprotein complex
LK0002181biological_processcytoplasmic translation
LK0003723molecular_functionRNA binding
LK0003735molecular_functionstructural constituent of ribosome
LK0005515molecular_functionprotein binding
LK0005654cellular_componentnucleoplasm
LK0005737cellular_componentcytoplasm
LK0005783cellular_componentendoplasmic reticulum
LK0005829cellular_componentcytosol
LK0005840cellular_componentribosome
LK0006412biological_processtranslation
LK0015934cellular_componentlarge ribosomal subunit
LK0016020cellular_componentmembrane
LK0022625cellular_componentcytosolic large ribosomal subunit
LK0022626cellular_componentcytosolic ribosome
LK1990904cellular_componentribonucleoprotein complex
LN0002181biological_processcytoplasmic translation
LN0003723molecular_functionRNA binding
LN0003735molecular_functionstructural constituent of ribosome
LN0005515molecular_functionprotein binding
LN0005634cellular_componentnucleus
LN0005730cellular_componentnucleolus
LN0005737cellular_componentcytoplasm
LN0005829cellular_componentcytosol
LN0005840cellular_componentribosome
LN0005925cellular_componentfocal adhesion
LN0006412biological_processtranslation
LN0022625cellular_componentcytosolic large ribosomal subunit
LN0022626cellular_componentcytosolic ribosome
LN0032991cellular_componentprotein-containing complex
LN0070062cellular_componentextracellular exosome
LN0071353biological_processcellular response to interleukin-4
LN1990904cellular_componentribonucleoprotein complex
LQ0002181biological_processcytoplasmic translation
LQ0003723molecular_functionRNA binding
LQ0003735molecular_functionstructural constituent of ribosome
LQ0005737cellular_componentcytoplasm
LQ0005829cellular_componentcytosol
LQ0005840cellular_componentribosome
LQ0006412biological_processtranslation
LQ0016020cellular_componentmembrane
LQ0022625cellular_componentcytosolic large ribosomal subunit
LQ0022626cellular_componentcytosolic ribosome
LQ1990904cellular_componentribonucleoprotein complex
LS0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LS0002181biological_processcytoplasmic translation
LS0003723molecular_functionRNA binding
LS0003729molecular_functionmRNA binding
LS0003735molecular_functionstructural constituent of ribosome
LS0005730cellular_componentnucleolus
LS0005737cellular_componentcytoplasm
LS0005829cellular_componentcytosol
LS0005840cellular_componentribosome
LS0006412biological_processtranslation
LS0016020cellular_componentmembrane
LS0022625cellular_componentcytosolic large ribosomal subunit
LS0022626cellular_componentcytosolic ribosome
LS1990904cellular_componentribonucleoprotein complex
LT0000049molecular_functiontRNA binding
LT0002181biological_processcytoplasmic translation
LT0003723molecular_functionRNA binding
LT0003735molecular_functionstructural constituent of ribosome
LT0005515molecular_functionprotein binding
LT0005737cellular_componentcytoplasm
LT0005829cellular_componentcytosol
LT0005840cellular_componentribosome
LT0006364biological_processrRNA processing
LT0006412biological_processtranslation
LT0016020cellular_componentmembrane
LT0022625cellular_componentcytosolic large ribosomal subunit
LT0022626cellular_componentcytosolic ribosome
LT0042273biological_processribosomal large subunit biogenesis
LT0070062cellular_componentextracellular exosome
LT1990904cellular_componentribonucleoprotein complex
LU0002181biological_processcytoplasmic translation
LU0003723molecular_functionRNA binding
LU0003735molecular_functionstructural constituent of ribosome
LU0005730cellular_componentnucleolus
LU0005737cellular_componentcytoplasm
LU0005829cellular_componentcytosol
LU0005840cellular_componentribosome
LU0006412biological_processtranslation
LU0016020cellular_componentmembrane
LU0022625cellular_componentcytosolic large ribosomal subunit
LU0022626cellular_componentcytosolic ribosome
LU0045202cellular_componentsynapse
LU1990904cellular_componentribonucleoprotein complex
LW0002181biological_processcytoplasmic translation
LW0003723molecular_functionRNA binding
LW0003735molecular_functionstructural constituent of ribosome
LW0005737cellular_componentcytoplasm
LW0005829cellular_componentcytosol
LW0005840cellular_componentribosome
LW0006412biological_processtranslation
LW0019843molecular_functionrRNA binding
LW0022625cellular_componentcytosolic large ribosomal subunit
LW0022626cellular_componentcytosolic ribosome
LW0046872molecular_functionmetal ion binding
LW0097371molecular_functionMDM2/MDM4 family protein binding
LW1901798biological_processpositive regulation of signal transduction by p53 class mediator
LW1990904cellular_componentribonucleoprotein complex
LW1990948molecular_functionubiquitin ligase inhibitor activity
NB0003723molecular_functionRNA binding
NB0005515molecular_functionprotein binding
NB0005525molecular_functionGTP binding
NB0005615cellular_componentextracellular space
NB0005634cellular_componentnucleus
NB0005654cellular_componentnucleoplasm
NB0005694cellular_componentchromosome
NB0005730cellular_componentnucleolus
NB0016020cellular_componentmembrane
NB0016604cellular_componentnuclear body
NB0017145biological_processstem cell division
NB0019827biological_processstem cell population maintenance
NB0030496cellular_componentmidbody
NB0032206biological_processpositive regulation of telomere maintenance
NB0033235biological_processpositive regulation of protein sumoylation
NB0042127biological_processregulation of cell population proliferation
NB0048027molecular_functionmRNA 5'-UTR binding
NB1902895biological_processpositive regulation of miRNA transcription
NB1904816biological_processpositive regulation of protein localization to chromosome, telomeric region
NE0001652cellular_componentgranular component
NE0003677molecular_functionDNA binding
NE0003723molecular_functionRNA binding
NE0005515molecular_functionprotein binding
NE0005634cellular_componentnucleus
NE0005654cellular_componentnucleoplasm
NE0005694cellular_componentchromosome
NE0005730cellular_componentnucleolus
NE0042254biological_processribosome biogenesis
NE0042273biological_processribosomal large subunit biogenesis
NE0042274biological_processribosomal small subunit biogenesis
NE0140693molecular_functionmolecular condensate scaffold activity
NF0000460biological_processmaturation of 5.8S rRNA
NF0000470biological_processmaturation of LSU-rRNA
NF0003723molecular_functionRNA binding
NF0005634cellular_componentnucleus
NF0005730cellular_componentnucleolus
NF0006364biological_processrRNA processing
NF0030687cellular_componentpreribosome, large subunit precursor
NF0042254biological_processribosome biogenesis
NF1990904cellular_componentribonucleoprotein complex
NG0000460biological_processmaturation of 5.8S rRNA
NG0000470biological_processmaturation of LSU-rRNA
NG0006364biological_processrRNA processing
NG0030687cellular_componentpreribosome, large subunit precursor
NM0000460biological_processmaturation of 5.8S rRNA
NM0000470biological_processmaturation of LSU-rRNA
NM0003723molecular_functionRNA binding
NM0005515molecular_functionprotein binding
NM0005634cellular_componentnucleus
NM0005730cellular_componentnucleolus
NM0030687cellular_componentpreribosome, large subunit precursor
NM0043231cellular_componentintracellular membrane-bounded organelle
NN0003723molecular_functionRNA binding
NN0005634cellular_componentnucleus
NN0005730cellular_componentnucleolus
NN0006364biological_processrRNA processing
NN0019843molecular_functionrRNA binding
NN0030687cellular_componentpreribosome, large subunit precursor
NO0003723molecular_functionRNA binding
NO0005515molecular_functionprotein binding
NO0005634cellular_componentnucleus
NO0005694cellular_componentchromosome
NO0005730cellular_componentnucleolus
NO0006364biological_processrRNA processing
NO0030688cellular_componentpreribosome, small subunit precursor
NQ0000176cellular_componentnuclear exosome (RNase complex)
NQ0001825biological_processblastocyst formation
NQ0005515molecular_functionprotein binding
NQ0005634cellular_componentnucleus
NQ0005654cellular_componentnucleoplasm
NQ0005730cellular_componentnucleolus
NQ0006364biological_processrRNA processing
NQ0016070biological_processRNA metabolic process
NQ0030687cellular_componentpreribosome, large subunit precursor
NQ0042273biological_processribosomal large subunit biogenesis
NS0000460biological_processmaturation of 5.8S rRNA
NS0000470biological_processmaturation of LSU-rRNA
NS0003723molecular_functionRNA binding
NS0005515molecular_functionprotein binding
NS0005634cellular_componentnucleus
NS0005730cellular_componentnucleolus
NS0006364biological_processrRNA processing
NS0019843molecular_functionrRNA binding
NS0030687cellular_componentpreribosome, large subunit precursor
NS0042134molecular_functionrRNA primary transcript binding
NS0042254biological_processribosome biogenesis
SA0002181biological_processcytoplasmic translation
SA0003723molecular_functionRNA binding
SA0003735molecular_functionstructural constituent of ribosome
SA0005515molecular_functionprotein binding
SA0005634cellular_componentnucleus
SA0005730cellular_componentnucleolus
SA0005737cellular_componentcytoplasm
SA0005791cellular_componentrough endoplasmic reticulum
SA0005829cellular_componentcytosol
SA0005840cellular_componentribosome
SA0005925cellular_componentfocal adhesion
SA0006412biological_processtranslation
SA0016020cellular_componentmembrane
SA0022625cellular_componentcytosolic large ribosomal subunit
SA0022626cellular_componentcytosolic ribosome
SA0070062cellular_componentextracellular exosome
SA1990904cellular_componentribonucleoprotein complex
SC0002181biological_processcytoplasmic translation
SC0003677molecular_functionDNA binding
SC0003723molecular_functionRNA binding
SC0003735molecular_functionstructural constituent of ribosome
SC0005515molecular_functionprotein binding
SC0005634cellular_componentnucleus
SC0005737cellular_componentcytoplasm
SC0005783cellular_componentendoplasmic reticulum
SC0005791cellular_componentrough endoplasmic reticulum
SC0005829cellular_componentcytosol
SC0005840cellular_componentribosome
SC0005925cellular_componentfocal adhesion
SC0006355biological_processregulation of DNA-templated transcription
SC0006412biological_processtranslation
SC0014069cellular_componentpostsynaptic density
SC0016020cellular_componentmembrane
SC0022625cellular_componentcytosolic large ribosomal subunit
SC0022626cellular_componentcytosolic ribosome
SC0036464cellular_componentcytoplasmic ribonucleoprotein granule
SC0045202cellular_componentsynapse
SC0045296molecular_functioncadherin binding
SC1990904cellular_componentribonucleoprotein complex
SD0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SD0002181biological_processcytoplasmic translation
SD0003677molecular_functionDNA binding
SD0003723molecular_functionRNA binding
SD0003729molecular_functionmRNA binding
SD0003735molecular_functionstructural constituent of ribosome
SD0005515molecular_functionprotein binding
SD0005634cellular_componentnucleus
SD0005730cellular_componentnucleolus
SD0005737cellular_componentcytoplasm
SD0005829cellular_componentcytosol
SD0005840cellular_componentribosome
SD0005925cellular_componentfocal adhesion
SD0006364biological_processrRNA processing
SD0006412biological_processtranslation
SD0014069cellular_componentpostsynaptic density
SD0016020cellular_componentmembrane
SD0022625cellular_componentcytosolic large ribosomal subunit
SD0022626cellular_componentcytosolic ribosome
SD0042273biological_processribosomal large subunit biogenesis
SD0042802molecular_functionidentical protein binding
SD1990904cellular_componentribonucleoprotein complex
SE0000470biological_processmaturation of LSU-rRNA
SE0002181biological_processcytoplasmic translation
SE0003723molecular_functionRNA binding
SE0003735molecular_functionstructural constituent of ribosome
SE0005515molecular_functionprotein binding
SE0005634cellular_componentnucleus
SE0005730cellular_componentnucleolus
SE0005737cellular_componentcytoplasm
SE0005829cellular_componentcytosol
SE0005840cellular_componentribosome
SE0005925cellular_componentfocal adhesion
SE0006412biological_processtranslation
SE0016020cellular_componentmembrane
SE0022625cellular_componentcytosolic large ribosomal subunit
SE0022626cellular_componentcytosolic ribosome
SE0042254biological_processribosome biogenesis
SE0045202cellular_componentsynapse
SE0045296molecular_functioncadherin binding
SE1990904cellular_componentribonucleoprotein complex
SG0002181biological_processcytoplasmic translation
SG0003723molecular_functionRNA binding
SG0003735molecular_functionstructural constituent of ribosome
SG0005515molecular_functionprotein binding
SG0005634cellular_componentnucleus
SG0005737cellular_componentcytoplasm
SG0005829cellular_componentcytosol
SG0005840cellular_componentribosome
SG0005925cellular_componentfocal adhesion
SG0006412biological_processtranslation
SG0016020cellular_componentmembrane
SG0019843molecular_functionrRNA binding
SG0022625cellular_componentcytosolic large ribosomal subunit
SG0022626cellular_componentcytosolic ribosome
SG1990904cellular_componentribonucleoprotein complex
SH0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0000794cellular_componentcondensed nuclear chromosome
SH0003676molecular_functionnucleic acid binding
SH0003723molecular_functionRNA binding
SH0005515molecular_functionprotein binding
SH0005634cellular_componentnucleus
SH0005654cellular_componentnucleoplasm
SH0005694cellular_componentchromosome
SH0005730cellular_componentnucleolus
SH0005737cellular_componentcytoplasm
SH0009303biological_processrRNA transcription
SH0016072biological_processrRNA metabolic process
SH0065003biological_processprotein-containing complex assembly
SI0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI0001825biological_processblastocyst formation
SI0003723molecular_functionRNA binding
SI0003735molecular_functionstructural constituent of ribosome
SI0005515molecular_functionprotein binding
SI0005730cellular_componentnucleolus
SI0005840cellular_componentribosome
SI0022625cellular_componentcytosolic large ribosomal subunit
SI1990904cellular_componentribonucleoprotein complex
SJ0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ0001510biological_processRNA methylation
SJ0003723molecular_functionRNA binding
SJ0005515molecular_functionprotein binding
SJ0005634cellular_componentnucleus
SJ0005654cellular_componentnucleoplasm
SJ0005694cellular_componentchromosome
SJ0005730cellular_componentnucleolus
SJ0006364biological_processrRNA processing
SJ0008168molecular_functionmethyltransferase activity
SJ0008649molecular_functionrRNA methyltransferase activity
SJ0008650molecular_functionrRNA (uridine-2'-O-)-methyltransferase activity
SJ0016435molecular_functionrRNA (guanine) methyltransferase activity
SJ0030687cellular_componentpreribosome, large subunit precursor
SJ0030688cellular_componentpreribosome, small subunit precursor
SJ0031167biological_processrRNA methylation
SJ0032259biological_processmethylation
SJ0042254biological_processribosome biogenesis
SJ0062105molecular_functionRNA 2'-O-methyltransferase activity
SK0000054biological_processribosomal subunit export from nucleus
SK0000460biological_processmaturation of 5.8S rRNA
SK0000470biological_processmaturation of LSU-rRNA
SK0003743molecular_functiontranslation initiation factor activity
SK0005515molecular_functionprotein binding
SK0005634cellular_componentnucleus
SK0005638cellular_componentlamin filament
SK0005654cellular_componentnucleoplasm
SK0005730cellular_componentnucleolus
SK0005737cellular_componentcytoplasm
SK0005829cellular_componentcytosol
SK0005882cellular_componentintermediate filament
SK0006110biological_processregulation of glycolytic process
SK0006412biological_processtranslation
SK0006413biological_processtranslational initiation
SK0030687cellular_componentpreribosome, large subunit precursor
SK0032868biological_processresponse to insulin
SK0035195biological_processmiRNA-mediated post-transcriptional gene silencing
SK0035278biological_processmiRNA-mediated gene silencing by inhibition of translation
SK0042254biological_processribosome biogenesis
SK0042256biological_processcytosolic ribosome assembly
SK0042273biological_processribosomal large subunit biogenesis
SK0042304biological_processregulation of fatty acid biosynthetic process
SK0043022molecular_functionribosome binding
SK0043023molecular_functionribosomal large subunit binding
SK0045202cellular_componentsynapse
SK0045652biological_processregulation of megakaryocyte differentiation
SK0045727biological_processpositive regulation of translation
SK0070062cellular_componentextracellular exosome
SK1902626biological_processassembly of large subunit precursor of preribosome
SK2000377biological_processregulation of reactive oxygen species metabolic process
SL0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SL0001649biological_processosteoblast differentiation
SL0003723molecular_functionRNA binding
SL0003730molecular_functionmRNA 3'-UTR binding
SL0005515molecular_functionprotein binding
SL0005634cellular_componentnucleus
SL0005694cellular_componentchromosome
SL0005730cellular_componentnucleolus
SL0016020cellular_componentmembrane
SL0032880biological_processregulation of protein localization
SL0042981biological_processregulation of apoptotic process
SL0045296molecular_functioncadherin binding
SL0048027molecular_functionmRNA 5'-UTR binding
SL2000772biological_processregulation of cellular senescence
SM0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SM0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SM0003723molecular_functionRNA binding
SM0005515molecular_functionprotein binding
SM0005634cellular_componentnucleus
SM0005654cellular_componentnucleoplasm
SM0005694cellular_componentchromosome
SM0005730cellular_componentnucleolus
SM0005829cellular_componentcytosol
SM0006364biological_processrRNA processing
SM0008283biological_processcell population proliferation
SM0016020cellular_componentmembrane
SM0030687cellular_componentpreribosome, large subunit precursor
SM0042254biological_processribosome biogenesis
SM0042273biological_processribosomal large subunit biogenesis
SM0043021molecular_functionribonucleoprotein complex binding
SM0051726biological_processregulation of cell cycle
SM0070545cellular_componentPeBoW complex
SN0003723molecular_functionRNA binding
SN0005515molecular_functionprotein binding
SN0005634cellular_componentnucleus
SN0005694cellular_componentchromosome
SN0005730cellular_componentnucleolus
SN0006364biological_processrRNA processing
SN0030687cellular_componentpreribosome, large subunit precursor
SN0034399cellular_componentnuclear periphery
SN0042254biological_processribosome biogenesis
SN0042273biological_processribosomal large subunit biogenesis
SO0003723molecular_functionRNA binding
SO0005515molecular_functionprotein binding
SO0005634cellular_componentnucleus
SO0005694cellular_componentchromosome
SO0005730cellular_componentnucleolus
SO0006364biological_processrRNA processing
SO0019843molecular_functionrRNA binding
SO0042254biological_processribosome biogenesis
SQ0000027biological_processribosomal large subunit assembly
SQ0000956biological_processnuclear-transcribed mRNA catabolic process
SQ0003723molecular_functionRNA binding
SQ0005515molecular_functionprotein binding
SQ0005634cellular_componentnucleus
SQ0005730cellular_componentnucleolus
SQ0005737cellular_componentcytoplasm
SQ0006364biological_processrRNA processing
SQ0030687cellular_componentpreribosome, large subunit precursor
SQ0042254biological_processribosome biogenesis
SQ0042273biological_processribosomal large subunit biogenesis
SR0000079biological_processregulation of cyclin-dependent protein serine/threonine kinase activity
SR0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SR0001649biological_processosteoblast differentiation
SR0003723molecular_functionRNA binding
SR0003924molecular_functionGTPase activity
SR0005515molecular_functionprotein binding
SR0005525molecular_functionGTP binding
SR0005634cellular_componentnucleus
SR0005654cellular_componentnucleoplasm
SR0005730cellular_componentnucleolus
SR0005737cellular_componentcytoplasm
SR0005829cellular_componentcytosol
SR0008156biological_processnegative regulation of DNA replication
SR0008285biological_processnegative regulation of cell population proliferation
SR0016020cellular_componentmembrane
SR0022408biological_processnegative regulation of cell-cell adhesion
SR0030336biological_processnegative regulation of cell migration
SR0031397biological_processnegative regulation of protein ubiquitination
SR0031965cellular_componentnuclear membrane
SR0033342biological_processnegative regulation of collagen binding
SR0042254biological_processribosome biogenesis
SR0042273biological_processribosomal large subunit biogenesis
SR0048471cellular_componentperinuclear region of cytoplasm
SR0050821biological_processprotein stabilization
SR1990275molecular_functionpreribosome binding
SS0000027biological_processribosomal large subunit assembly
SS0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SS0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SS0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SS0003723molecular_functionRNA binding
SS0005515molecular_functionprotein binding
SS0005634cellular_componentnucleus
SS0005654cellular_componentnucleoplasm
SS0005694cellular_componentchromosome
SS0005730cellular_componentnucleolus
SS0006364biological_processrRNA processing
SS0008283biological_processcell population proliferation
SS0030687cellular_componentpreribosome, large subunit precursor
SS0042254biological_processribosome biogenesis
SS0042273biological_processribosomal large subunit biogenesis
SS0043021molecular_functionribonucleoprotein complex binding
SS0051726biological_processregulation of cell cycle
SS0070545cellular_componentPeBoW complex
SS1901796biological_processregulation of signal transduction by p53 class mediator
SS1990904cellular_componentribonucleoprotein complex
ST0000027biological_processribosomal large subunit assembly
ST0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ST0000794cellular_componentcondensed nuclear chromosome
ST0002244biological_processhematopoietic progenitor cell differentiation
ST0003723molecular_functionRNA binding
ST0005515molecular_functionprotein binding
ST0005634cellular_componentnucleus
ST0005654cellular_componentnucleoplasm
ST0005730cellular_componentnucleolus
ST0005783cellular_componentendoplasmic reticulum
ST0007080biological_processmitotic metaphase chromosome alignment
ST0008097molecular_function5S rRNA binding
ST0030687cellular_componentpreribosome, large subunit precursor
ST0042254biological_processribosome biogenesis
ST0042273biological_processribosomal large subunit biogenesis
ST1901796biological_processregulation of signal transduction by p53 class mediator
ST1902570biological_processprotein localization to nucleolus
SV0003735molecular_functionstructural constituent of ribosome
SV0005515molecular_functionprotein binding
SV0005634cellular_componentnucleus
SV0005654cellular_componentnucleoplasm
SV0005730cellular_componentnucleolus
SV0005840cellular_componentribosome
SV0006412biological_processtranslation
SV0042254biological_processribosome biogenesis
SV0042273biological_processribosomal large subunit biogenesis
SW0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SW0003676molecular_functionnucleic acid binding
SW0003723molecular_functionRNA binding
SW0003724molecular_functionRNA helicase activity
SW0004386molecular_functionhelicase activity
SW0005515molecular_functionprotein binding
SW0005524molecular_functionATP binding
SW0005634cellular_componentnucleus
SW0005694cellular_componentchromosome
SW0005730cellular_componentnucleolus
SW0016020cellular_componentmembrane
SW0016787molecular_functionhydrolase activity
SW0016887molecular_functionATP hydrolysis activity
SZ0003723molecular_functionRNA binding
SZ0005634cellular_componentnucleus
SZ0005654cellular_componentnucleoplasm
SZ0005730cellular_componentnucleolus
SZ0042273biological_processribosomal large subunit biogenesis
SZ0043231cellular_componentintracellular membrane-bounded organelle
Functional Information from PROSITE/UniProt
site_idPS00071
Number of Residues8
DetailsGAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. SSCTTRkM
ChainResidueDetails
SISER3-MET10

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FiRhqsdRyvKIkrn..WRKprG
ChainResidueDetails
LQPHE20-GLY40

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsspCHIEMiL
ChainResidueDetails
LAARG126-LEU150

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIRvVRKSIARV
ChainResidueDetails
LSLYS43-VAL57

site_idPS00039
Number of Residues9
DetailsDEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VIDEADRiL
ChainResidueDetails
SWVAL331-LEU339

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFSLeELrvaG
ChainResidueDetails
L6ARG71-GLY85

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRaMELLK
ChainResidueDetails
LUPRO52-LYS62

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTsSfGkRrnkt.HtlCrRCG
ChainResidueDetails
LWGLY4-GLY23

site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGkLpkqp.ViVkakfFSrrAeekIksvG
ChainResidueDetails
LKLYS110-GLY141

site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NrvPLRRthqkFVIATSt.K
ChainResidueDetails
SCASN182-LYS200

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRaHGnsGmVrAkFrsnLP
ChainResidueDetails
LTGLY72-PRO93

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktkrGQaaldrLkVFdG
ChainResidueDetails
L7VAL84-GLY107

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG
ChainResidueDetails
L9ASP46-GLY69

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmgVPYciIkGKarLG
ChainResidueDetails
SECYS174-GLY191

site_idPS01108
Number of Residues19
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGhyKGqqiGkV
ChainResidueDetails
LIASP52-VAL70

site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV
ChainResidueDetails
SAGLY15-VAL22

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH
ChainResidueDetails
SAASN116-HIS142

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVIrqrksyrrk.DGvflyFedNagVI
ChainResidueDetails
LGALA79-ILE105

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. KeIlGTaqSVGcNVdG
ChainResidueDetails
BALYS130-GLY145

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLApdydaldV
ChainResidueDetails
LHLYS134-VAL149

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FcSgpIyPGhGmmFvRnD
ChainResidueDetails
SVPHE8-ASP25

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikgmgtvqk.GmpHkcYhGkTG
ChainResidueDetails
LEGLY37-GLY62

site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSRtnRPpLSLsRM
ChainResidueDetails
LBLYS49-MET66

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QattVknKdiRkFlDGIYVseK
ChainResidueDetails
SGGLN163-LYS184

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR
ChainResidueDetails
LNPHE211-ARG234

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGsdDgSLRLWEV
ChainResidueDetails
SSLEU428-VAL442

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLrQifNgTfvklnkasinMLriVepYI
ChainResidueDetails
SDVAL108-ILE140
SITHR115-VAL147

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:21406692
ChainResidueDetails
SRASN289
SZTHR8
SRASP221

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163
ChainResidueDetails
SJTRP58
SJASP76
SJASP92
SZSER16

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
SELYS48
SELYS125
SELYS245
SZLYS90
SSSEP127
SNSER11
SNSER13

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:18669648
ChainResidueDetails
STLYS266
SOLYS322
SZTHR144
STLYS226

site_idSWS_FT_FI5
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
BALYS83
SZLYS74
SRSER470

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231
ChainResidueDetails
LCLYS170
SRSER472
LCLYS128

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
SJSER549
NBLYS253
NBLYS267
NBLYS275
SNLYS218
SNLYS179
SRLYS522

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
SRSER558
SLTHR465

site_idSWS_FT_FI9
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
ChainResidueDetails
SHARG245
SRLYS103

site_idSWS_FT_FI10
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
SRLYS332
SRLYS534
SLSER427

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
SJSER688
SLSER443

site_idSWS_FT_FI12
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
SHLYS139
SJLYS579
SJLYS643
SJLYS659
SJLYS678
SJLYS710
SLLYS468

site_idSWS_FT_FI13
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:16964243, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163
ChainResidueDetails
SHLYS271
SLSER469

site_idSWS_FT_FI14
Number of Residues5
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
SLLYS120
SLLYS254
SLLYS380
SLLYS461

site_idSWS_FT_FI15
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447
ChainResidueDetails
SLLYS435

221051

PDB entries from 2024-06-12

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