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8B2C

Crystal structure of type I dehydroquinase from Salmonella typhi inhibited by an epoxide derivative

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AAA0003855molecular_function3-dehydroquinate dehydratase activity
AAA0008652biological_processamino acid biosynthetic process
AAA0009073biological_processaromatic amino acid family biosynthetic process
AAA0009423biological_processchorismate biosynthetic process
AAA0016829molecular_functionlyase activity
AAA0046279biological_process3,4-dihydroxybenzoate biosynthetic process
Functional Information from PROSITE/UniProt
site_idPS01028
Number of Residues31
DetailsDEHYDROQUINASE_I Dehydroquinase class I active site. DLELftgdadvkatvdyahahnvyVVmSNHD
ChainResidueDetails
AAAASP114-ASP144

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00214, ECO:0000305|PubMed:24957267
ChainResidueDetails
AAAHIS143

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Schiff-base intermediate with substrate => ECO:0000255|HAMAP-Rule:MF_00214, ECO:0000269|PubMed:10360352, ECO:0000269|PubMed:11976491
ChainResidueDetails
AAALYS170

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00214, ECO:0000269|PubMed:10360352, ECO:0000269|PubMed:11976491
ChainResidueDetails
AAASER21
AAASER232

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00214, ECO:0000269|PubMed:10360352, ECO:0000269|PubMed:11976491, ECO:0000269|PubMed:24957267
ChainResidueDetails
AAAGLU46
AAAARG213
AAAGLN236

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00214, ECO:0000269|PubMed:10360352
ChainResidueDetails
AAAARG82

Catalytic Information from CSA
site_idMCSA1
Number of Residues3
DetailsM-CSA 54
ChainResidueDetails
AAAGLU86hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AAAHIS143hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AAALYS170covalently attached, electron pair acceptor, electron pair donor, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, proton acceptor, proton donor

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PDB entries from 2024-05-29

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