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6SPR

Structure of the Escherichia coli methionyl-tRNA synthetase variant VI298 complexed with beta-methionine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004825molecular_functionmethionine-tRNA ligase activity
A0005524molecular_functionATP binding
A0006418biological_processtRNA aminoacylation for protein translation
A0006431biological_processmethionyl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 701
ChainResidue
ACYS145
ACYS148
ACYS158
ACYS161

site_idAC2
Number of Residues13
Detailsbinding site for residue B3M A 702
ChainResidue
APRO257
ATYR260
AHIS301
AHOH801
AHOH802
AHOH805
AHOH872
AHOH1259
ALEU13
ATYR15
AASP52
ATRP253
AALA256

site_idAC3
Number of Residues7
Detailsbinding site for residue CIT A 703
ChainResidue
AGLN63
ALYS132
AHOH843
AHOH974
AHOH988
AHOH993
AHOH1086

site_idAC4
Number of Residues10
Detailsbinding site for residue CIT A 704
ChainResidue
APRO57
APRO137
AARG233
ATYR251
AHOH804
AHOH814
AHOH819
AHOH850
AHOH1238
AHOH1398

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 705
ChainResidue
AGLN458
AARG469
AASP472
AHOH844
AHOH920
AHOH1010

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 706
ChainResidue
ATYR128
AGLN458
AALA459
AARG469
AHOH806
AHOH807
AHOH1010
AHOH1081

site_idAC7
Number of Residues5
Detailsbinding site for residue GOL A 707
ChainResidue
APHE300
APHE304
AHOH840
AHOH1134
AHOH1318

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL A 708
ChainResidue
AHIS98
ASER99
AGLU100
AARG103

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PyaNGsIHLGHM
ChainResidueDetails
APRO14-MET25

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING:
ChainResidueDetails
ALYS335
ACYS145
ACYS148
ACYS158
ACYS161

221051

PDB entries from 2024-06-12

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