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6D7S

Cryo-EM structure of human TRPV6-Y467A in amphipols

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005262molecular_functioncalcium channel activity
A0005515molecular_functionprotein binding
A0005516molecular_functioncalmodulin binding
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0006816biological_processcalcium ion transport
A0016020cellular_componentmembrane
A0017158biological_processregulation of calcium ion-dependent exocytosis
A0034704cellular_componentcalcium channel complex
A0035898biological_processparathyroid hormone secretion
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0051592biological_processresponse to calcium ion
A0055074biological_processcalcium ion homeostasis
A0055085biological_processtransmembrane transport
A0070588biological_processcalcium ion transmembrane transport
A0098703biological_processcalcium ion import across plasma membrane
B0005216molecular_functionmonoatomic ion channel activity
B0005262molecular_functioncalcium channel activity
B0005515molecular_functionprotein binding
B0005516molecular_functioncalmodulin binding
B0005886cellular_componentplasma membrane
B0006811biological_processmonoatomic ion transport
B0006816biological_processcalcium ion transport
B0016020cellular_componentmembrane
B0017158biological_processregulation of calcium ion-dependent exocytosis
B0034704cellular_componentcalcium channel complex
B0035898biological_processparathyroid hormone secretion
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0051592biological_processresponse to calcium ion
B0055074biological_processcalcium ion homeostasis
B0055085biological_processtransmembrane transport
B0070588biological_processcalcium ion transmembrane transport
B0098703biological_processcalcium ion import across plasma membrane
C0005216molecular_functionmonoatomic ion channel activity
C0005262molecular_functioncalcium channel activity
C0005515molecular_functionprotein binding
C0005516molecular_functioncalmodulin binding
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0006816biological_processcalcium ion transport
C0016020cellular_componentmembrane
C0017158biological_processregulation of calcium ion-dependent exocytosis
C0034704cellular_componentcalcium channel complex
C0035898biological_processparathyroid hormone secretion
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C0051592biological_processresponse to calcium ion
C0055074biological_processcalcium ion homeostasis
C0055085biological_processtransmembrane transport
C0070588biological_processcalcium ion transmembrane transport
C0098703biological_processcalcium ion import across plasma membrane
D0005216molecular_functionmonoatomic ion channel activity
D0005262molecular_functioncalcium channel activity
D0005515molecular_functionprotein binding
D0005516molecular_functioncalmodulin binding
D0005886cellular_componentplasma membrane
D0006811biological_processmonoatomic ion transport
D0006816biological_processcalcium ion transport
D0016020cellular_componentmembrane
D0017158biological_processregulation of calcium ion-dependent exocytosis
D0034704cellular_componentcalcium channel complex
D0035898biological_processparathyroid hormone secretion
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
D0051592biological_processresponse to calcium ion
D0055074biological_processcalcium ion homeostasis
D0055085biological_processtransmembrane transport
D0070588biological_processcalcium ion transmembrane transport
D0098703biological_processcalcium ion import across plasma membrane
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues488
DetailsTRANSMEM: Helical => ECO:0000305|PubMed:29258289
ChainResidueDetails
ATYR328-ILE348
ALEU386-PHE408
APRO424-ARG443
AGLU450-ALA469
ALEU490-PHE512
AILE557-MET577
BTYR328-ILE348
BLEU386-PHE408
BPRO424-ARG443
BGLU450-ALA469
BLEU490-PHE512
BILE557-MET577
CTYR328-ILE348
CLEU386-PHE408
CPRO424-ARG443
CGLU450-ALA469
CLEU490-PHE512
CILE557-MET577
DTYR328-ILE348
DLEU386-PHE408
DPRO424-ARG443
DGLU450-ALA469
DLEU490-PHE512
DILE557-MET577

site_idSWS_FT_FI2
Number of Residues252
DetailsTOPO_DOM: Extracellular => ECO:0000305|PubMed:29258289
ChainResidueDetails
ATYR349-ARG385
ALEU444-GLY449
AGLN513-ASP525
AASN546-SER556
BTYR349-ARG385
BLEU444-GLY449
BGLN513-ASP525
CTYR349-ARG385
CLEU444-GLY449
CGLN513-ASP525
CASN546-SER556
DTYR349-ARG385
DLEU444-GLY449
DGLN513-ASP525
DASN546-SER556
BASN546-SER556

site_idSWS_FT_FI3
Number of Residues720
DetailsTOPO_DOM: Cytoplasmic => ECO:0000305|PubMed:29258289
ChainResidueDetails
AARG409-GLY423
AARG470-ASP489
AMET578-ILE725
BARG409-GLY423
BARG470-ASP489
BMET578-ILE725
CARG409-GLY423
CARG470-ASP489
CMET578-ILE725
DARG409-GLY423
DARG470-ASP489
DMET578-ILE725

site_idSWS_FT_FI4
Number of Residues76
DetailsINTRAMEM: Pore-forming => ECO:0000305|PubMed:29258289
ChainResidueDetails
ATYR526-ALA545
BTYR526-ALA545
CTYR526-ALA545
DTYR526-ALA545

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305|PubMed:29258289
ChainResidueDetails
AASP542
BASP542
CASP542
DASP542

site_idSWS_FT_FI6
Number of Residues4
DetailsMOD_RES: Phosphotyrosine; by SRC => ECO:0000250|UniProtKB:Q9R186
ChainResidueDetails
ATYR161
BTYR161
CTYR161
DTYR161

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: Phosphothreonine; by PKC/PRKCA => ECO:0000269|PubMed:11248124
ChainResidueDetails
ATHR702
BTHR702
CTHR702
DTHR702

site_idSWS_FT_FI8
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN358
BASN358
CASN358
DASN358

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PDB entries from 2024-06-12

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